RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 IGHV3OR16-9A0A0B4J2B5 98 aa7.66□□□□□ -1.18
CSMD1-205ENST00000519623 D6R8Y8 96 aa7.66□□□□□ -1.18
CSMD1-205ENST00000519623 NPYP01303 97 aa7.66□□□□□ -1.18
CSMD1-205ENST00000519623 MRPS36P82909 103 aaKnown RBP7.66□□□□□ -1.18
CSMD1-205ENST00000519623 C9orf116Q5BN46 136 aaPredicted RBP7.66□□□□□ -1.18
CSMD1-205ENST00000519623 MRPL54Q6P161 138 aaKnown RBP7.66□□□□□ -1.18
CSMD1-205ENST00000519623 HBBP68871 147 aa7.65□□□□□ -1.18
CSMD1-205ENST00000519623 SPAG11BQ08648 103 aa7.65□□□□□ -1.18
CSMD1-205ENST00000519623 OR10D4PQ8NGN7 298 aa7.65□□□□□ -1.18
CSMD1-205ENST00000519623 SPANXA1Q9NS26 97 aa7.65□□□□□ -1.18
CSMD1-205ENST00000519623 LRP2P98164 4655 aa7.65□□□□□ -1.19
CSMD1-205ENST00000519623 F8W036 122 aa7.64□□□□□ -1.19
CSMD1-205ENST00000519623 PPBPP02775 128 aa7.64□□□□□ -1.19
CSMD1-205ENST00000519623 S100A8P05109 93 aa7.64□□□□□ -1.19
CSMD1-205ENST00000519623 MRPL35Q9NZE8 188 aaKnown RBP7.64□□□□□ -1.19
CSMD1-205ENST00000519623 PSORS1C2Q9UIG4 136 aa7.64□□□□□ -1.19
CSMD1-205ENST00000519623 F8WDY8 70 aa7.63□□□□□ -1.19
CSMD1-205ENST00000519623 RPL18AQ02543 176 aaKnown RBP7.63□□□□□ -1.19
CSMD1-205ENST00000519623 C10orf25Q5T742 122 aa7.63□□□□□ -1.19
CSMD1-205ENST00000519623 PHF5AQ7RTV0 110 aaKnown RBP7.63□□□□□ -1.19
CSMD1-205ENST00000519623 ORAOV1Q8WV07 137 aa7.63□□□□□ -1.19
CSMD1-205ENST00000519623 TMEM136Q6ZRR5 245 aa7.62□□□□□ -1.19
CSMD1-205ENST00000519623 IFITM10A6NMD0 228 aa7.61□□□□□ -1.19
CSMD1-205ENST00000519623 PRSS47A8MTI9 375 aa7.61□□□□□ -1.19
CSMD1-205ENST00000519623 MT-ND6P03923 174 aa7.61□□□□□ -1.19
CSMD1-205ENST00000519623 KIAA0087Q14695 138 aa7.61□□□□□ -1.19
CSMD1-205ENST00000519623 UNQ6190/PRO20217Q6UXQ8 127 aa7.61□□□□□ -1.19
CSMD1-205ENST00000519623 ORMDL3Q8N138 153 aa7.61□□□□□ -1.19
CSMD1-205ENST00000519623 IMMP2LQ96T52 175 aa7.61□□□□□ -1.19
CSMD1-205ENST00000519623 PYGO1Q9Y3Y4 419 aa7.61□□□□□ -1.19
CSMD1-205ENST00000519623 NDUFA1O15239 70 aa7.6□□□□□ -1.19
CSMD1-205ENST00000519623 TLX1NBP0CAT3 122 aa7.6□□□□□ -1.19
CSMD1-205ENST00000519623 LINC00242Q5T6M2 205 aa7.6□□□□□ -1.19
CSMD1-205ENST00000519623 ATP5L2Q7Z4Y8 100 aa7.6□□□□□ -1.19
CSMD1-205ENST00000519623 PRELID3AQ96N28 172 aa7.6□□□□□ -1.19
CSMD1-205ENST00000519623 C6orf48Q9UBA6 75 aa7.6□□□□□ -1.19
CSMD1-205ENST00000519623 IGLV4-3A0A075B6K6 122 aa7.59□□□□□ -1.19
CSMD1-205ENST00000519623 A0A087WZ39 114 aa7.59□□□□□ -1.19
CSMD1-205ENST00000519623 FAM168BA1KXE4 195 aa7.59□□□□□ -1.19
CSMD1-205ENST00000519623 RAB5AP20339 215 aa7.59□□□□□ -1.19
CSMD1-205ENST00000519623 C1orf137Q5JT78 98 aa7.59□□□□□ -1.19
CSMD1-205ENST00000519623 KRTAP11-1Q8IUC1 163 aa7.59□□□□□ -1.19
CSMD1-205ENST00000519623 IFI27P40305 119 aaPredicted RBP7.58□□□□□ -1.2
CSMD1-205ENST00000519623 KRTAP7-1Q8IUC3 87 aa7.58□□□□□ -1.2
CSMD1-205ENST00000519623 TGIF2-C20orf24A0A0A6YYL0 155 aa7.57□□□□□ -1.2
CSMD1-205ENST00000519623 LOC389332A0A1B0GUA5 103 aa7.57□□□□□ -1.2
CSMD1-205ENST00000519623 IGLV7-43P04211 117 aa7.57□□□□□ -1.2
CSMD1-205ENST00000519623 TMEM141Q96I45 108 aa7.57□□□□□ -1.2
CSMD1-205ENST00000519623 RNF213Q63HN8 5207 aa7.56□□□□□ -1.2
CSMD1-205ENST00000519623 GAGE2EQ4V326 116 aa7.56□□□□□ -1.2
CSMD1-205ENST00000519623 GAGE2DQ9UEU5 116 aa7.56□□□□□ -1.2
CSMD1-205ENST00000519623 LAMTOR2Q9Y2Q5 125 aa7.56□□□□□ -1.2
CSMD1-205ENST00000519623 UBE2D1P51668 147 aa7.55□□□□□ -1.2
CSMD1-205ENST00000519623 ZC2HC1BQ5TFG8 222 aa7.55□□□□□ -1.2
CSMD1-205ENST00000519623 C2orf82Q6UX34 121 aa7.55□□□□□ -1.2
CSMD1-205ENST00000519623 LINC00173Q6ZV60 143 aa7.55□□□□□ -1.2
CSMD1-205ENST00000519623 LINC01561Q8N1V8 128 aa7.55□□□□□ -1.2
CSMD1-205ENST00000519623 Q8N8P6 123 aa7.55□□□□□ -1.2
CSMD1-205ENST00000519623 AMELXQ99217 191 aa7.55□□□□□ -1.2
CSMD1-205ENST00000519623 TRBV30A0A0K0K1B3 111 aa7.54□□□□□ -1.2
CSMD1-205ENST00000519623 TEX43Q6ZNM6 134 aa7.54□□□□□ -1.2
CSMD1-205ENST00000519623 FAM19A5Q7Z5A7 132 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-205ENST00000519623 DIRC1Q969H9 104 aa7.54□□□□□ -1.2
CSMD1-205ENST00000519623 ANAPC16Q96DE5 110 aa7.54□□□□□ -1.2
CSMD1-205ENST00000519623 MAP1LC3AQ9H492 121 aa7.54□□□□□ -1.2
CSMD1-205ENST00000519623 IGIPA6NJ69 53 aa7.53□□□□□ -1.2
CSMD1-205ENST00000519623 MT-ND4LP03901 98 aa7.53□□□□□ -1.2
CSMD1-205ENST00000519623 PNRC1Q12796 327 aaPredicted RBP7.53□□□□□ -1.2
CSMD1-205ENST00000519623 C9orf129Q5T035 196 aaKnown RBP7.53□□□□□ -1.2
CSMD1-205ENST00000519623 C2orf66Q6UXQ4 117 aa7.53□□□□□ -1.2
CSMD1-205ENST00000519623 PRR26Q8N8Z3 221 aa7.53□□□□□ -1.2
CSMD1-205ENST00000519623 CYSLTR1Q9Y271 337 aa7.53□□□□□ -1.2
CSMD1-205ENST00000519623 NDUFC2-KCTD14E9PQ53 114 aa7.52□□□□□ -1.21
CSMD1-205ENST00000519623 H0Y9J4 135 aa7.52□□□□□ -1.21
CSMD1-205ENST00000519623 FAM19A3Q7Z5A8 133 aa7.52□□□□□ -1.21
CSMD1-205ENST00000519623 VCX2Q9H322 139 aa7.52□□□□□ -1.21
CSMD1-205ENST00000519623 K7EMI3 77 aa7.51□□□□□ -1.21
CSMD1-205ENST00000519623 NPSP0C0P6 89 aa7.51□□□□□ -1.21
CSMD1-205ENST00000519623 ORMDL2Q53FV1 153 aa7.51□□□□□ -1.21
CSMD1-205ENST00000519623 PACRGQ96M98 296 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-205ENST00000519623 C2orf88Q9BSF0 95 aa7.51□□□□□ -1.21
CSMD1-205ENST00000519623 M0QXV9 152 aa7.5□□□□□ -1.21
CSMD1-205ENST00000519623 KRTAP1-4P0C5Y4 121 aa7.5□□□□□ -1.21
CSMD1-205ENST00000519623 Q6ZN92 141 aa7.5□□□□□ -1.21
CSMD1-205ENST00000519623 UBE2BP63146 152 aa7.48□□□□□ -1.21
CSMD1-205ENST00000519623 C6orf226Q5I0X4 101 aa7.48□□□□□ -1.21
CSMD1-205ENST00000519623 Q8IZM0 81 aa7.48□□□□□ -1.21
CSMD1-205ENST00000519623 NXT2Q9NPJ8 142 aaKnown RBP7.48□□□□□ -1.21
CSMD1-205ENST00000519623 TOMM7Q9P0U1 55 aa7.48□□□□□ -1.21
CSMD1-205ENST00000519623 LPAP08519 4548 aa7.48□□□□□ -1.21
CSMD1-205ENST00000519623 IGLV1-50A0A075B6I6 118 aa7.47□□□□□ -1.21
CSMD1-205ENST00000519623 PRSS2P07478 247 aa7.47□□□□□ -1.21
CSMD1-205ENST00000519623 CKS1BP61024 79 aa7.47□□□□□ -1.21
CSMD1-205ENST00000519623 RAB14P61106 215 aa7.47□□□□□ -1.21
CSMD1-205ENST00000519623 ALKBH7Q9BT30 221 aaPredicted RBP7.47□□□□□ -1.21
CSMD1-205ENST00000519623 CTDSP1Q9GZU7 261 aa7.47□□□□□ -1.21
CSMD1-205ENST00000519623 CDKN2A-AS1Q9UH64 79 aa7.47□□□□□ -1.21
CSMD1-205ENST00000519623 HERVK_113P63121 156 aa7.46□□□□□ -1.22
CSMD1-205ENST00000519623 KIAA1644Q3SXP7 199 aa7.46□□□□□ -1.22
CSMD1-205ENST00000519623 LINC00469Q8N7U9 141 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms