RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 ZZEF1O43149 2961 aa-1.56□□□□□ -2.66
PCM1-208ENST00000518877 SHANK2Q9UPX8 1470 aa-1.56□□□□□ -2.66
PCM1-208ENST00000518877 TROQ12816 1431 aaPredicted RBP-1.57□□□□□ -2.66
PCM1-208ENST00000518877 PAPPA2Q9BXP8 1791 aa-1.57□□□□□ -2.66
PCM1-208ENST00000518877 SACSQ9NZJ4 4579 aa-1.57□□□□□ -2.66
PCM1-208ENST00000518877 PTPN23Q9H3S7 1636 aa-1.57□□□□□ -2.66
PCM1-208ENST00000518877 CKS1BP61024 79 aa-1.57□□□□□ -2.66
PCM1-208ENST00000518877 DEFA5Q01523 94 aa-1.57□□□□□ -2.66
PCM1-208ENST00000518877 H1FX-AS1Q4G0G2 97 aa-1.57□□□□□ -2.66
PCM1-208ENST00000518877 ZNF518AQ6AHZ1 1483 aa-1.57□□□□□ -2.66
PCM1-208ENST00000518877 AKAP13Q12802 2813 aa-1.58□□□□□ -2.66
PCM1-208ENST00000518877 SETBP1Q9Y6X0 1596 aa-1.58□□□□□ -2.66
PCM1-208ENST00000518877 LINC00959A0A1B0GUT2 108 aa-1.58□□□□□ -2.66
PCM1-208ENST00000518877 F8VRH5 84 aa-1.58□□□□□ -2.66
PCM1-208ENST00000518877 H3BNG1 76 aa-1.58□□□□□ -2.66
PCM1-208ENST00000518877 K7ERU9 68 aa-1.58□□□□□ -2.66
PCM1-208ENST00000518877 UQCR11O14957 56 aa-1.58□□□□□ -2.66
PCM1-208ENST00000518877 ARPC5O15511 151 aa-1.58□□□□□ -2.66
PCM1-208ENST00000518877 APOC3P02656 99 aa-1.58□□□□□ -2.66
PCM1-208ENST00000518877 TPPP2P59282 170 aa-1.58□□□□□ -2.66
PCM1-208ENST00000518877 SCIMPQ6UWF3 145 aa-1.58□□□□□ -2.66
PCM1-208ENST00000518877 AQP10Q96PS8 301 aa-1.58□□□□□ -2.66
PCM1-208ENST00000518877 CMYA5Q8N3K9 4069 aa-1.58□□□□□ -2.66
PCM1-208ENST00000518877 SLIT1O75093 1534 aa-1.58□□□□□ -2.66
PCM1-208ENST00000518877 ZFHX3Q15911 3703 aa-1.58□□□□□ -2.66
PCM1-208ENST00000518877 KALRNO60229 2985 aa-1.58□□□□□ -2.66
PCM1-208ENST00000518877 MYOM3Q5VTT5 1437 aa-1.58□□□□□ -2.66
PCM1-208ENST00000518877 DOCK2Q92608 1830 aa-1.59□□□□□ -2.66
PCM1-208ENST00000518877 SPEF2Q9C093 1822 aa-1.59□□□□□ -2.66
PCM1-208ENST00000518877 M0R2Z0 102 aa-1.59□□□□□ -2.66
PCM1-208ENST00000518877 S100A5P33763 92 aa-1.59□□□□□ -2.66
PCM1-208ENST00000518877 SELENOSQ9BQE4 189 aa-1.59□□□□□ -2.66
PCM1-208ENST00000518877 NDUFA4L2Q9NRX3 87 aa-1.59□□□□□ -2.66
PCM1-208ENST00000518877 SPANXA1Q9NS26 97 aa-1.59□□□□□ -2.66
PCM1-208ENST00000518877 KNL1Q8NG31 2342 aa-1.59□□□□□ -2.66
PCM1-208ENST00000518877 ANKRD11Q6UB99 2663 aaPredicted RBP-1.59□□□□□ -2.66
PCM1-208ENST00000518877 IGLC7A0M8Q6 106 aa-1.6□□□□□ -2.67
PCM1-208ENST00000518877 J3QR89 54 aa-1.6□□□□□ -2.67
PCM1-208ENST00000518877 SSSCA1O60232 199 aa-1.6□□□□□ -2.67
PCM1-208ENST00000518877 TAC4Q86UU9 113 aa-1.6□□□□□ -2.67
PCM1-208ENST00000518877 TSLPQ969D9 159 aa-1.6□□□□□ -2.67
PCM1-208ENST00000518877 RAPGEF6Q8TEU7 1601 aa-1.6□□□□□ -2.67
PCM1-208ENST00000518877 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.61□□□□□ -2.673e-7■■■■□ 23.8
PCM1-208ENST00000518877 HIST1H1DP16402 221 aaKnown RBP-1.61□□□□□ -2.67
PCM1-208ENST00000518877 MT1HP80294 61 aa-1.61□□□□□ -2.67
PCM1-208ENST00000518877 KCNRGQ8N5I3 272 aa-1.61□□□□□ -2.67
PCM1-208ENST00000518877 LINC01558Q9Y6Z2 57 aa-1.61□□□□□ -2.67
PCM1-208ENST00000518877 REV3LO60673 3130 aa-1.61□□□□□ -2.67
PCM1-208ENST00000518877 ACACAQ13085 2346 aa-1.61□□□□□ -2.67
PCM1-208ENST00000518877 A0A0C4DFX4 3053 aa-1.61□□□□□ -2.67
PCM1-208ENST00000518877 PPIP5K1Q6PFW1 1433 aa-1.62□□□□□ -2.67
PCM1-208ENST00000518877 GUCA1AP43080 201 aaPredicted RBP-1.62□□□□□ -2.67
PCM1-208ENST00000518877 Q8N8P6 123 aa-1.62□□□□□ -2.67
PCM1-208ENST00000518877 TMEM263Q8WUH6 116 aaKnown RBP-1.62□□□□□ -2.67
PCM1-208ENST00000518877 LSM10Q969L4 123 aaKnown RBP-1.62□□□□□ -2.67
PCM1-208ENST00000518877 DPH3Q96FX2 82 aa-1.62□□□□□ -2.67
PCM1-208ENST00000518877 RIMS1Q86UR5 1692 aaKnown RBP-1.62□□□□□ -2.67
PCM1-208ENST00000518877 DNAH7Q8WXX0 4024 aa-1.62□□□□□ -2.67
PCM1-208ENST00000518877 BTAF1O14981 1849 aa-1.63□□□□□ -2.67
PCM1-208ENST00000518877 UBE2D3P61077 147 aa-1.63□□□□□ -2.67
PCM1-208ENST00000518877 UBE2D2P62837 147 aa-1.63□□□□□ -2.67
PCM1-208ENST00000518877 C10orf113Q5VZT2 155 aa-1.63□□□□□ -2.67
PCM1-208ENST00000518877 TEX15Q9BXT5 2789 aa-1.63□□□□□ -2.67
PCM1-208ENST00000518877 DYNC1H1Q14204 4646 aaKnown RBP-1.63□□□□□ -2.67
PCM1-208ENST00000518877 FHAD1B1AJZ9 1412 aa-1.64□□□□□ -2.67
PCM1-208ENST00000518877 TRBV7-3A0A075B6L6 115 aa-1.64□□□□□ -2.67
PCM1-208ENST00000518877 SCGB1A1P11684 91 aa-1.64□□□□□ -2.67
PCM1-208ENST00000518877 B2MP61769 119 aa-1.64□□□□□ -2.67
PCM1-208ENST00000518877 TSTD1Q8NFU3 115 aa-1.64□□□□□ -2.67
PCM1-208ENST00000518877 GSKIPQ9P0R6 139 aa-1.64□□□□□ -2.67
PCM1-208ENST00000518877 MGAM2Q2M2H8 2515 aa-1.64□□□□□ -2.67
PCM1-208ENST00000518877 PSME4Q14997 1843 aa-1.65□□□□□ -2.67
PCM1-208ENST00000518877 USP9XQ93008 2570 aaPredicted RBP-1.65□□□□□ -2.67
PCM1-208ENST00000518877 C9orf92A6NGG3 77 aa-1.65□□□□□ -2.67
PCM1-208ENST00000518877 MAGI1Q96QZ7 1491 aaPredicted RBP-1.65□□□□□ -2.67
PCM1-208ENST00000518877 RELNP78509 3460 aa-1.65□□□□□ -2.67
PCM1-208ENST00000518877 HMGN4O00479 90 aa-1.66□□□□□ -2.68
PCM1-208ENST00000518877 SFT2D2O95562 160 aa-1.66□□□□□ -2.68
PCM1-208ENST00000518877 MGPP08493 103 aa-1.66□□□□□ -2.68
PCM1-208ENST00000518877 COPZ1P61923 177 aa-1.66□□□□□ -2.68
PCM1-208ENST00000518877 RPS25P62851 125 aaKnown RBP-1.66□□□□□ -2.68
PCM1-208ENST00000518877 FDCSPQ8NFU4 85 aa-1.66□□□□□ -2.68
PCM1-208ENST00000518877 TPT1P8Q9HAU6 139 aa-1.66□□□□□ -2.68
PCM1-208ENST00000518877 DYNLRB1Q9NP97 96 aa-1.66□□□□□ -2.68
PCM1-208ENST00000518877 SPRR4Q96PI1 79 aa-1.67□□□□□ -2.68
PCM1-208ENST00000518877 CRIPTQ9P021 101 aa-1.67□□□□□ -2.68
PCM1-208ENST00000518877 WDR87Q6ZQQ6 2873 aa-1.68□□□□□ -2.68
PCM1-208ENST00000518877 NKTRP30414 1462 aaKnown RBP-1.68□□□□□ -2.68
PCM1-208ENST00000518877 CCDC141Q6ZP82 1450 aa-1.68□□□□□ -2.68
PCM1-208ENST00000518877 TRANK1O15050 2925 aa-1.68□□□□□ -2.68
PCM1-208ENST00000518877 NBEAQ8NFP9 2946 aa-1.68□□□□□ -2.68
PCM1-208ENST00000518877 I3L3M4 83 aa-1.68□□□□□ -2.68
PCM1-208ENST00000518877 UBA52P62987 128 aaKnown RBP-1.68□□□□□ -2.68
PCM1-208ENST00000518877 LINC01600Q96MT4 127 aa-1.68□□□□□ -2.68
PCM1-208ENST00000518877 MGST2Q99735 147 aa-1.68□□□□□ -2.68
PCM1-208ENST00000518877 TRIOO75962 3097 aa-1.68□□□□□ -2.68
PCM1-208ENST00000518877 A0A0G2JMZ2 1700 aa-1.69□□□□□ -2.68
PCM1-208ENST00000518877 DNAH8Q96JB1 4490 aa-1.69□□□□□ -2.68
PCM1-208ENST00000518877 ANKRD30AQ9BXX3 1397 aa-1.69□□□□□ -2.68
PCM1-208ENST00000518877 COL14A1Q05707 1796 aaKnown RBP-1.69□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms