RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 LINC00474Q9P2X8 69 aa15.6■□□□□ 0.09
PVT1-204ENST00000517525 KRTAP29-1A8MX34 341 aaPredicted RBP15.59■□□□□ 0.09
PVT1-204ENST00000517525 NPSP0C0P6 89 aa15.59■□□□□ 0.09
PVT1-204ENST00000517525 ORMDL2Q53FV1 153 aa15.59■□□□□ 0.09
PVT1-204ENST00000517525 C5orf38Q86SI9 138 aa15.59■□□□□ 0.09
PVT1-204ENST00000517525 NXT2Q9NPJ8 142 aaKnown RBP15.59■□□□□ 0.09
PVT1-204ENST00000517525 IGLV4-69A0A075B6H9 119 aa15.58■□□□□ 0.08
PVT1-204ENST00000517525 IGLV4-3A0A075B6K6 122 aa15.58■□□□□ 0.08
PVT1-204ENST00000517525 CARHSP1Q9Y2V2 147 aaKnown RBP15.58■□□□□ 0.08
PVT1-204ENST00000517525 IFITM10A6NMD0 228 aa15.57■□□□□ 0.08
PVT1-204ENST00000517525 OR10D4PQ8NGN7 298 aa15.57■□□□□ 0.08
PVT1-204ENST00000517525 CYSLTR1Q9Y271 337 aa15.57■□□□□ 0.08
PVT1-204ENST00000517525 A0A096LNI7 61 aa15.56■□□□□ 0.08
PVT1-204ENST00000517525 F8WDY8 70 aa15.56■□□□□ 0.08
PVT1-204ENST00000517525 S100PP25815 95 aa15.56■□□□□ 0.08
PVT1-204ENST00000517525 TMEM141Q96I45 108 aa15.56■□□□□ 0.08
PVT1-204ENST00000517525 GNB1LQ9BYB4 327 aa15.56■□□□□ 0.08
PVT1-204ENST00000517525 MAJINQ3KP22 176 aa15.55■□□□□ 0.08
PVT1-204ENST00000517525 COX19Q49B96 90 aa15.55■□□□□ 0.08
PVT1-204ENST00000517525 C2orf66Q6UXQ4 117 aa15.55■□□□□ 0.08
PVT1-204ENST00000517525 RHEBQ15382 184 aa15.54■□□□□ 0.08
PVT1-204ENST00000517525 IGKV2-24A0A0C4DH68 120 aa15.53■□□□□ 0.08
PVT1-204ENST00000517525 G0S2P27469 103 aa15.53■□□□□ 0.08
PVT1-204ENST00000517525 RNF151Q2KHN1 245 aa15.53■□□□□ 0.08
PVT1-204ENST00000517525 Q6ZRU5 148 aa15.53■□□□□ 0.08
PVT1-204ENST00000517525 IGIPA6NJ69 53 aa15.52■□□□□ 0.08
PVT1-204ENST00000517525 LINC00242Q5T6M2 205 aa15.52■□□□□ 0.08
PVT1-204ENST00000517525 CAMK2N2Q96S95 79 aa15.52■□□□□ 0.08
PVT1-204ENST00000517525 AMELXQ99217 191 aa15.52■□□□□ 0.08
PVT1-204ENST00000517525 A0A087WZ39 114 aa15.51■□□□□ 0.07
PVT1-204ENST00000517525 LOC107984640A0A0U1RRK4 108 aa15.51■□□□□ 0.07
PVT1-204ENST00000517525 SPAG11BQ08648 103 aa15.51■□□□□ 0.07
PVT1-204ENST00000517525 TEX43Q6ZNM6 134 aa15.51■□□□□ 0.07
PVT1-204ENST00000517525 STPG4Q8N801 248 aa15.51■□□□□ 0.07
PVT1-204ENST00000517525 OXTP01178 125 aa15.5■□□□□ 0.07
PVT1-204ENST00000517525 LINC01561Q8N1V8 128 aa15.5■□□□□ 0.07
PVT1-204ENST00000517525 TGIF2-C20orf24A0A0A6YYL0 155 aa15.49■□□□□ 0.07
PVT1-204ENST00000517525 UBE2D1P51668 147 aa15.49■□□□□ 0.07
PVT1-204ENST00000517525 PTTG1IPP53801 180 aa15.49■□□□□ 0.07
PVT1-204ENST00000517525 KIAA1644Q3SXP7 199 aa15.49■□□□□ 0.07
PVT1-204ENST00000517525 LINC01546A6NGU7 62 aa15.48■□□□□ 0.07
PVT1-204ENST00000517525 J3QL48 77 aa15.48■□□□□ 0.07
PVT1-204ENST00000517525 MT-ND6P03923 174 aa15.48■□□□□ 0.07
PVT1-204ENST00000517525 Q6ZN92 141 aa15.48■□□□□ 0.07
PVT1-204ENST00000517525 LINC00173Q6ZV60 143 aa15.48■□□□□ 0.07
PVT1-204ENST00000517525 FAM19A3Q7Z5A8 133 aa15.48■□□□□ 0.07
PVT1-204ENST00000517525 C7orf33Q8WU49 177 aa15.48■□□□□ 0.07
PVT1-204ENST00000517525 ORAOV1Q8WV07 137 aa15.48■□□□□ 0.07
PVT1-204ENST00000517525 C2orf88Q9BSF0 95 aa15.48■□□□□ 0.07
PVT1-204ENST00000517525 MRPL35Q9NZE8 188 aaKnown RBP15.48■□□□□ 0.07
PVT1-204ENST00000517525 HNRNPA3P51991 378 aaKnown RBP15.47■□□□□ 0.07
PVT1-204ENST00000517525 ALKBH7Q9BT30 221 aaPredicted RBP15.47■□□□□ 0.07
PVT1-204ENST00000517525 VCX2Q9H322 139 aa15.47■□□□□ 0.07
PVT1-204ENST00000517525 PKHD1L1Q86WI1 4243 aa15.46■□□□□ 0.07
PVT1-204ENST00000517525 PAPPA-AS1Q5QFB9 102 aa15.46■□□□□ 0.07
PVT1-204ENST00000517525 TOMM6Q96B49 74 aa15.46■□□□□ 0.07
PVT1-204ENST00000517525 TIMM17AQ99595 171 aa15.46■□□□□ 0.07
PVT1-204ENST00000517525 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.45■□□□□ 0.06
PVT1-204ENST00000517525 RPS10P5Q9NQ39 176 aa15.45■□□□□ 0.06
PVT1-204ENST00000517525 LINC01549A6NIU2 74 aa15.44■□□□□ 0.06
PVT1-204ENST00000517525 KIAA0087Q14695 138 aa15.44■□□□□ 0.06
PVT1-204ENST00000517525 NDUFA1O15239 70 aa15.42■□□□□ 0.06
PVT1-204ENST00000517525 TLX1NBP0CAT3 122 aa15.41■□□□□ 0.06
PVT1-204ENST00000517525 GAGE2BQ13066 116 aa15.41■□□□□ 0.06
PVT1-204ENST00000517525 ERASQ7Z444 233 aa15.41■□□□□ 0.06
PVT1-204ENST00000517525 LRP1Q07954 4544 aaKnown RBP15.41■□□□□ 0.06
PVT1-204ENST00000517525 SEC11AP67812 179 aa15.4■□□□□ 0.06
PVT1-204ENST00000517525 ZC2HC1BQ5TFG8 222 aa15.4■□□□□ 0.06
PVT1-204ENST00000517525 MRPL18Q9H0U6 180 aaKnown RBP15.4■□□□□ 0.06
PVT1-204ENST00000517525 FABP9Q0Z7S8 132 aa15.38■□□□□ 0.05
PVT1-204ENST00000517525 C10orf25Q5T742 122 aa15.38■□□□□ 0.05
PVT1-204ENST00000517525 FAT3Q8TDW7 4589 aa15.38■□□□□ 0.05
PVT1-204ENST00000517525 PRR3P79522 188 aaKnown RBP15.37■□□□□ 0.05
PVT1-204ENST00000517525 UNQ6190/PRO20217Q6UXQ8 127 aa15.37■□□□□ 0.05
PVT1-204ENST00000517525 A0A0J9YXV3 536 aa15.36■□□□□ 0.05
PVT1-204ENST00000517525 A0A1W2PNN7 141 aa15.36■□□□□ 0.05
PVT1-204ENST00000517525 SNAPINO95295 136 aa15.36■□□□□ 0.05
PVT1-204ENST00000517525 HERVK_113P63121 156 aa15.36■□□□□ 0.05
PVT1-204ENST00000517525 SVBPQ8N300 66 aa15.36■□□□□ 0.05
PVT1-204ENST00000517525 SCGB3A1Q96QR1 104 aa15.36■□□□□ 0.05
PVT1-204ENST00000517525 C6orf48Q9UBA6 75 aa15.36■□□□□ 0.05
PVT1-204ENST00000517525 TRBV30A0A0K0K1B3 111 aa15.35■□□□□ 0.05
PVT1-204ENST00000517525 APOC3P02656 99 aa15.35■□□□□ 0.05
PVT1-204ENST00000517525 NDUFA5Q16718 116 aa15.35■□□□□ 0.05
PVT1-204ENST00000517525 RPL18AQ02543 176 aaKnown RBP15.34■□□□□ 0.05
PVT1-204ENST00000517525 C9orf116Q5BN46 136 aaPredicted RBP15.33■□□□□ 0.04
PVT1-204ENST00000517525 FA2HQ7L5A8 372 aa15.32■□□□□ 0.04
PVT1-204ENST00000517525 Q6ZRP5 223 aa15.31■□□□□ 0.04
PVT1-204ENST00000517525 Q8IZM0 81 aa15.3■□□□□ 0.04
PVT1-204ENST00000517525 GEMIN7Q9H840 131 aaKnown RBP15.3■□□□□ 0.04
PVT1-204ENST00000517525 CDKN2A-AS1Q9UH64 79 aa15.3■□□□□ 0.04
PVT1-204ENST00000517525 TRAPPC1Q9Y5R8 145 aa15.3■□□□□ 0.04
PVT1-204ENST00000517525 SMCO4Q9NRQ5 59 aa15.29■□□□□ 0.04
PVT1-204ENST00000517525 IGLV5-45A0A087WSX0 123 aa15.28■□□□□ 0.04
PVT1-204ENST00000517525 TINCRA0A1B0GVN0 87 aa15.28■□□□□ 0.04
PVT1-204ENST00000517525 C2orf82Q6UX34 121 aa15.28■□□□□ 0.04
PVT1-204ENST00000517525 PACRGQ96M98 296 aaPredicted RBP15.28■□□□□ 0.04
PVT1-204ENST00000517525 CST9LQ9H4G1 147 aa15.28■□□□□ 0.04
PVT1-204ENST00000517525 C18orf32Q8TCD1 76 aa15.27■□□□□ 0.04
PVT1-204ENST00000517525 NDUFC2-KCTD14E9PQ53 114 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms