RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 PHF5AQ7RTV0 110 aaKnown RBP8.94□□□□□ -0.98
SCARNA20.5-201ENST00000516991 DIRC1Q969H9 104 aa8.94□□□□□ -0.98
SCARNA20.5-201ENST00000516991 OPRPNQ99935 248 aaPredicted RBP8.94□□□□□ -0.98
SCARNA20.5-201ENST00000516991 SMIM2Q9BVW6 85 aa8.94□□□□□ -0.98
SCARNA20.5-201ENST00000516991 RNF213Q63HN8 5207 aa8.93□□□□□ -0.98
SCARNA20.5-201ENST00000516991 IGHV3OR16-9A0A0B4J2B5 98 aa8.93□□□□□ -0.98
SCARNA20.5-201ENST00000516991 SMIM27A0A1W2PRY6 76 aa8.93□□□□□ -0.98
SCARNA20.5-201ENST00000516991 RPL39P62891 51 aaKnown RBP8.93□□□□□ -0.98
SCARNA20.5-201ENST00000516991 HBBP68871 147 aa8.93□□□□□ -0.98
SCARNA20.5-201ENST00000516991 MRPS36P82909 103 aaKnown RBP8.93□□□□□ -0.98
SCARNA20.5-201ENST00000516991 NAT8Q9UHE5 227 aa8.93□□□□□ -0.98
SCARNA20.5-201ENST00000516991 IFITM10A6NMD0 228 aa8.92□□□□□ -0.98
SCARNA20.5-201ENST00000516991 F8W036 122 aa8.92□□□□□ -0.98
SCARNA20.5-201ENST00000516991 TNFRSF6BO95407 300 aa8.92□□□□□ -0.98
SCARNA20.5-201ENST00000516991 TLX1NBP0CAT3 122 aa8.92□□□□□ -0.98
SCARNA20.5-201ENST00000516991 IGLV7-43P04211 117 aa8.91□□□□□ -0.98
SCARNA20.5-201ENST00000516991 hCG_2014768A0A024R1R8 64 aa8.9□□□□□ -0.98
SCARNA20.5-201ENST00000516991 TGIF2-C20orf24A0A0A6YYL0 155 aa8.9□□□□□ -0.98
SCARNA20.5-201ENST00000516991 PPBPP02775 128 aa8.9□□□□□ -0.98
SCARNA20.5-201ENST00000516991 D6R8Y8 96 aa8.89□□□□□ -0.99
SCARNA20.5-201ENST00000516991 FAM104AQ969W3 186 aa8.89□□□□□ -0.99
SCARNA20.5-201ENST00000516991 A0A087WZ39 114 aa8.88□□□□□ -0.99
SCARNA20.5-201ENST00000516991 H0Y9J4 135 aa8.88□□□□□ -0.99
SCARNA20.5-201ENST00000516991 NPYP01303 97 aa8.88□□□□□ -0.99
SCARNA20.5-201ENST00000516991 MRPL54Q6P161 138 aaKnown RBP8.88□□□□□ -0.99
SCARNA20.5-201ENST00000516991 SMDT1Q9H4I9 107 aa8.88□□□□□ -0.99
SCARNA20.5-201ENST00000516991 C6orf48Q9UBA6 75 aa8.88□□□□□ -0.99
SCARNA20.5-201ENST00000516991 A0A1B0GXF2 115 aa8.87□□□□□ -0.99
SCARNA20.5-201ENST00000516991 IFI27P40305 119 aaPredicted RBP8.87□□□□□ -0.99
SCARNA20.5-201ENST00000516991 PEA15Q15121 130 aa8.87□□□□□ -0.99
SCARNA20.5-201ENST00000516991 C10orf25Q5T742 122 aa8.87□□□□□ -0.99
SCARNA20.5-201ENST00000516991 UNQ6190/PRO20217Q6UXQ8 127 aa8.87□□□□□ -0.99
SCARNA20.5-201ENST00000516991 FAM19A5Q7Z5A7 132 aaPredicted RBP8.87□□□□□ -0.99
SCARNA20.5-201ENST00000516991 IGLV1-50A0A075B6I6 118 aa8.86□□□□□ -0.99
SCARNA20.5-201ENST00000516991 TRBV30A0A0K0K1B3 111 aa8.86□□□□□ -0.99
SCARNA20.5-201ENST00000516991 FAM168BA1KXE4 195 aa8.86□□□□□ -0.99
SCARNA20.5-201ENST00000516991 RAB5AP20339 215 aa8.86□□□□□ -0.99
SCARNA20.5-201ENST00000516991 ORMDL3Q8N138 153 aa8.86□□□□□ -0.99
SCARNA20.5-201ENST00000516991 PRR26Q8N8Z3 221 aa8.86□□□□□ -0.99
SCARNA20.5-201ENST00000516991 PYGO1Q9Y3Y4 419 aa8.86□□□□□ -0.99
SCARNA20.5-201ENST00000516991 C9JQL5 133 aa8.85□□□□□ -0.99
SCARNA20.5-201ENST00000516991 M0QXV9 152 aa8.85□□□□□ -0.99
SCARNA20.5-201ENST00000516991 GAGE2EQ4V326 116 aa8.85□□□□□ -0.99
SCARNA20.5-201ENST00000516991 GAGE2DQ9UEU5 116 aa8.85□□□□□ -0.99
SCARNA20.5-201ENST00000516991 IGLV4-3A0A075B6K6 122 aa8.84□□□□□ -0.99
SCARNA20.5-201ENST00000516991 UBE2BP63146 152 aa8.84□□□□□ -0.99
SCARNA20.5-201ENST00000516991 KIAA0087Q14695 138 aa8.84□□□□□ -0.99
SCARNA20.5-201ENST00000516991 ATP5L2Q7Z4Y8 100 aa8.84□□□□□ -0.99
SCARNA20.5-201ENST00000516991 LINC01561Q8N1V8 128 aa8.84□□□□□ -0.99
SCARNA20.5-201ENST00000516991 PACRGQ96M98 296 aaPredicted RBP8.84□□□□□ -0.99
SCARNA20.5-201ENST00000516991 NDUFC2-KCTD14E9PQ53 114 aa8.83□□□□□ -1
SCARNA20.5-201ENST00000516991 LINC00242Q5T6M2 205 aa8.83□□□□□ -1
SCARNA20.5-201ENST00000516991 KRTAP11-1Q8IUC1 163 aa8.83□□□□□ -1
SCARNA20.5-201ENST00000516991 TMEM141Q96I45 108 aa8.83□□□□□ -1
SCARNA20.5-201ENST00000516991 PRELID3AQ96N28 172 aa8.83□□□□□ -1
SCARNA20.5-201ENST00000516991 RPL13AP40429 203 aaKnown RBP8.82□□□□□ -1
SCARNA20.5-201ENST00000516991 TEX43Q6ZNM6 134 aa8.82□□□□□ -1
SCARNA20.5-201ENST00000516991 TMEM136Q6ZRR5 245 aa8.82□□□□□ -1
SCARNA20.5-201ENST00000516991 C2orf88Q9BSF0 95 aa8.82□□□□□ -1
SCARNA20.5-201ENST00000516991 LAMTOR2Q9Y2Q5 125 aa8.82□□□□□ -1
SCARNA20.5-201ENST00000516991 UBE2D1P51668 147 aa8.81□□□□□ -1
SCARNA20.5-201ENST00000516991 Q6ZN92 141 aa8.81□□□□□ -1
SCARNA20.5-201ENST00000516991 KRTAP1-4P0C5Y4 121 aa8.8□□□□□ -1
SCARNA20.5-201ENST00000516991 SRSF3P84103 164 aaKnown RBP8.8□□□□□ -1
SCARNA20.5-201ENST00000516991 KRTAP7-1Q8IUC3 87 aa8.8□□□□□ -1
SCARNA20.5-201ENST00000516991 MAP1LC3AQ9H492 121 aa8.8□□□□□ -1
SCARNA20.5-201ENST00000516991 PRSS47A8MTI9 375 aa8.79□□□□□ -1
SCARNA20.5-201ENST00000516991 PRSS2P07478 247 aa8.79□□□□□ -1
SCARNA20.5-201ENST00000516991 C2orf82Q6UX34 121 aa8.79□□□□□ -1
SCARNA20.5-201ENST00000516991 CYSLTR1Q9Y271 337 aa8.79□□□□□ -1
SCARNA20.5-201ENST00000516991 NPSP0C0P6 89 aa8.78□□□□□ -1
SCARNA20.5-201ENST00000516991 C9orf129Q5T035 196 aaKnown RBP8.78□□□□□ -1
SCARNA20.5-201ENST00000516991 CKS1BP61024 79 aa8.77□□□□□ -1.01
SCARNA20.5-201ENST00000516991 CARHSP1Q9Y2V2 147 aaKnown RBP8.77□□□□□ -1.01
SCARNA20.5-201ENST00000516991 K7EMI3 77 aa8.76□□□□□ -1.01
SCARNA20.5-201ENST00000516991 NUPR1O60356 82 aa8.76□□□□□ -1.01
SCARNA20.5-201ENST00000516991 ORMDL2Q53FV1 153 aa8.76□□□□□ -1.01
SCARNA20.5-201ENST00000516991 C2orf66Q6UXQ4 117 aa8.76□□□□□ -1.01
SCARNA20.5-201ENST00000516991 Q8IZM0 81 aa8.76□□□□□ -1.01
SCARNA20.5-201ENST00000516991 Q8N8P6 123 aa8.76□□□□□ -1.01
SCARNA20.5-201ENST00000516991 AMELXQ99217 191 aa8.76□□□□□ -1.01
SCARNA20.5-201ENST00000516991 VCX2Q9H322 139 aa8.76□□□□□ -1.01
SCARNA20.5-201ENST00000516991 LOC389332A0A1B0GUA5 103 aa8.75□□□□□ -1.01
SCARNA20.5-201ENST00000516991 LINC00173Q6ZV60 143 aa8.75□□□□□ -1.01
SCARNA20.5-201ENST00000516991 TOMM7Q9P0U1 55 aa8.75□□□□□ -1.01
SCARNA20.5-201ENST00000516991 ZNF861PO60384 105 aa8.74□□□□□ -1.01
SCARNA20.5-201ENST00000516991 SEC11AP67812 179 aa8.74□□□□□ -1.01
SCARNA20.5-201ENST00000516991 PNRC1Q12796 327 aaPredicted RBP8.74□□□□□ -1.01
SCARNA20.5-201ENST00000516991 LBHQ53QV2 105 aaPredicted RBP8.74□□□□□ -1.01
SCARNA20.5-201ENST00000516991 C6orf226Q5I0X4 101 aa8.74□□□□□ -1.01
SCARNA20.5-201ENST00000516991 PAPPA-AS1Q5QFB9 102 aa8.74□□□□□ -1.01
SCARNA20.5-201ENST00000516991 FAM19A3Q7Z5A8 133 aa8.74□□□□□ -1.01
SCARNA20.5-201ENST00000516991 LPAP08519 4548 aa8.74□□□□□ -1.01
SCARNA20.5-201ENST00000516991 HERVK_113P63121 156 aa8.73□□□□□ -1.01
SCARNA20.5-201ENST00000516991 PRR4Q16378 134 aa8.73□□□□□ -1.01
SCARNA20.5-201ENST00000516991 ALKBH7Q9BT30 221 aaPredicted RBP8.73□□□□□ -1.01
SCARNA20.5-201ENST00000516991 G0S2P27469 103 aa8.72□□□□□ -1.01
SCARNA20.5-201ENST00000516991 NXT2Q9NPJ8 142 aaKnown RBP8.72□□□□□ -1.01
SCARNA20.5-201ENST00000516991 TP73-AS1Q9UF72 201 aa8.72□□□□□ -1.01
SCARNA20.5-201ENST00000516991 IGIPA6NJ69 53 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms