RNA–Protein interactions for RNA: ENST00000516918.1

SCARNA11.1-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 132 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.1-201ENST00000516918 TSHBP01222 138 aa4.34□□□□□ -1.71
SCARNA11.1-201ENST00000516918 ZNF25P17030 456 aaPredicted RBP4.34□□□□□ -1.71
SCARNA11.1-201ENST00000516918 RAB5BP61020 215 aa4.34□□□□□ -1.71
SCARNA11.1-201ENST00000516918 KIAA1644Q3SXP7 199 aa4.34□□□□□ -1.71
SCARNA11.1-201ENST00000516918 ORMDL2Q53FV1 153 aa4.34□□□□□ -1.71
SCARNA11.1-201ENST00000516918 RNASEKQ6P5S7 137 aaKnown RBP4.34□□□□□ -1.71
SCARNA11.1-201ENST00000516918 SPINK6Q6UWN8 80 aa4.34□□□□□ -1.71
SCARNA11.1-201ENST00000516918 Q8N8P6 123 aa4.34□□□□□ -1.71
SCARNA11.1-201ENST00000516918 CCL25O15444 150 aa4.33□□□□□ -1.72
SCARNA11.1-201ENST00000516918 NPYP01303 97 aa4.33□□□□□ -1.72
SCARNA11.1-201ENST00000516918 FGF6P10767 208 aa4.33□□□□□ -1.72
SCARNA11.1-201ENST00000516918 ESDP10768 282 aa4.33□□□□□ -1.72
SCARNA11.1-201ENST00000516918 ZNF664Q8N3J9 261 aa4.33□□□□□ -1.72
SCARNA11.1-201ENST00000516918 OR5A1Q8NGJ0 315 aa4.33□□□□□ -1.72
SCARNA11.1-201ENST00000516918 ALKBH7Q9BT30 221 aaPredicted RBP4.33□□□□□ -1.72
SCARNA11.1-201ENST00000516918 SMIM2Q9BVW6 85 aa4.33□□□□□ -1.72
SCARNA11.1-201ENST00000516918 CSDC2Q9Y534 153 aaKnown RBP4.33□□□□□ -1.72
SCARNA11.1-201ENST00000516918 LINC00614P0C842 121 aa4.32□□□□□ -1.72
SCARNA11.1-201ENST00000516918 IFI27P40305 119 aaPredicted RBP4.32□□□□□ -1.72
SCARNA11.1-201ENST00000516918 SRSF9Q13242 221 aaKnown RBP eCLIP4.32□□□□□ -1.72
SCARNA11.1-201ENST00000516918 MRPL52Q86TS9 123 aaKnown RBP4.32□□□□□ -1.72
SCARNA11.1-201ENST00000516918 CHCHD10Q8WYQ3 142 aaPredicted RBP4.32□□□□□ -1.72
SCARNA11.1-201ENST00000516918 LINC00526Q96FQ7 95 aa4.32□□□□□ -1.72
SCARNA11.1-201ENST00000516918 TIMM21Q9BVV7 248 aa4.32□□□□□ -1.72
SCARNA11.1-201ENST00000516918 LPAP08519 4548 aa4.31□□□□□ -1.72
SCARNA11.1-201ENST00000516918 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.31□□□□□ -1.72
SCARNA11.1-201ENST00000516918 IGKV2-29A2NJV5 120 aaPredicted RBP4.31□□□□□ -1.72
SCARNA11.1-201ENST00000516918 COLCA2A8K830 154 aa4.31□□□□□ -1.72
SCARNA11.1-201ENST00000516918 SS18Q15532 418 aa4.31□□□□□ -1.72
SCARNA11.1-201ENST00000516918 PAPPA-AS1Q5QFB9 102 aa4.31□□□□□ -1.72
SCARNA11.1-201ENST00000516918 Q6ZRP5 223 aa4.31□□□□□ -1.72
SCARNA11.1-201ENST00000516918 FA2HQ7L5A8 372 aa4.31□□□□□ -1.72
SCARNA11.1-201ENST00000516918 CDC42SE2Q9NRR3 84 aa4.31□□□□□ -1.72
SCARNA11.1-201ENST00000516918 PYGO1Q9Y3Y4 419 aa4.31□□□□□ -1.72
SCARNA11.1-201ENST00000516918 GVQW2A0A096LPI5 108 aaPredicted RBP4.3□□□□□ -1.72
SCARNA11.1-201ENST00000516918 C1orf196B1AJZ1 125 aa4.3□□□□□ -1.72
SCARNA11.1-201ENST00000516918 NPSP0C0P6 89 aa4.3□□□□□ -1.72
SCARNA11.1-201ENST00000516918 CBLN2Q8IUK8 224 aa4.3□□□□□ -1.72
SCARNA11.1-201ENST00000516918 YPEL4Q96NS1 127 aa4.3□□□□□ -1.72
SCARNA11.1-201ENST00000516918 VCX2Q9H322 139 aa4.3□□□□□ -1.72
SCARNA11.1-201ENST00000516918 SPANXA1Q9NS26 97 aa4.3□□□□□ -1.72
SCARNA11.1-201ENST00000516918 CYSLTR1Q9Y271 337 aa4.3□□□□□ -1.72
SCARNA11.1-201ENST00000516918 LINC01546A6NGU7 62 aa4.29□□□□□ -1.72
SCARNA11.1-201ENST00000516918 TRGC2P03986 189 aa4.29□□□□□ -1.72
SCARNA11.1-201ENST00000516918 XCL1P47992 114 aa4.29□□□□□ -1.72
SCARNA11.1-201ENST00000516918 MRPS36P82909 103 aaKnown RBP4.29□□□□□ -1.72
SCARNA11.1-201ENST00000516918 FOXI1Q12951 378 aa4.29□□□□□ -1.72
SCARNA11.1-201ENST00000516918 GAGE2BQ13066 116 aa4.29□□□□□ -1.72
SCARNA11.1-201ENST00000516918 Q6ZN92 141 aa4.29□□□□□ -1.72
SCARNA11.1-201ENST00000516918 ERASQ7Z444 233 aa4.29□□□□□ -1.72
SCARNA11.1-201ENST00000516918 BAGE3Q86Y29 109 aa4.29□□□□□ -1.72
SCARNA11.1-201ENST00000516918 TMEM141Q96I45 108 aa4.29□□□□□ -1.72
SCARNA11.1-201ENST00000516918 SCGB3A1Q96QR1 104 aa4.29□□□□□ -1.72
SCARNA11.1-201ENST00000516918 LINC00474Q9P2X8 69 aa4.29□□□□□ -1.72
SCARNA11.1-201ENST00000516918 UBE2D4Q9Y2X8 147 aa4.29□□□□□ -1.72
SCARNA11.1-201ENST00000516918 LINC00959A0A1B0GUT2 108 aa4.28□□□□□ -1.72
SCARNA11.1-201ENST00000516918 A0A1W2PNN7 141 aa4.28□□□□□ -1.72
SCARNA11.1-201ENST00000516918 C2orf66Q6UXQ4 117 aa4.28□□□□□ -1.72
SCARNA11.1-201ENST00000516918 TOMM6Q96B49 74 aa4.28□□□□□ -1.72
SCARNA11.1-201ENST00000516918 CHCHD1Q96BP2 118 aaKnown RBP4.28□□□□□ -1.72
SCARNA11.1-201ENST00000516918 CARD19Q96LW7 228 aa4.28□□□□□ -1.72
SCARNA11.1-201ENST00000516918 IGHV1-58A0A0C4DH39 117 aa4.27□□□□□ -1.73
SCARNA11.1-201ENST00000516918 IGIPA6NJ69 53 aa4.27□□□□□ -1.73
SCARNA11.1-201ENST00000516918 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.27□□□□□ -1.73
SCARNA11.1-201ENST00000516918 RPL39P62891 51 aaKnown RBP4.27□□□□□ -1.73
SCARNA11.1-201ENST00000516918 SEC11AP67812 179 aa4.27□□□□□ -1.73
SCARNA11.1-201ENST00000516918 SYCNQ0VAF6 134 aa4.27□□□□□ -1.73
SCARNA11.1-201ENST00000516918 CD164L2Q6UWJ8 174 aa4.27□□□□□ -1.73
SCARNA11.1-201ENST00000516918 TEX43Q6ZNM6 134 aa4.27□□□□□ -1.73
SCARNA11.1-201ENST00000516918 PRR26Q8N8Z3 221 aa4.27□□□□□ -1.73
SCARNA11.1-201ENST00000516918 C18orf32Q8TCD1 76 aa4.27□□□□□ -1.73
SCARNA11.1-201ENST00000516918 C2orf88Q9BSF0 95 aa4.27□□□□□ -1.73
SCARNA11.1-201ENST00000516918 PSORS1C2Q9UIG4 136 aa4.27□□□□□ -1.73
SCARNA11.1-201ENST00000516918 TRAV13-1A0A0B4J241 112 aa4.26□□□□□ -1.73
SCARNA11.1-201ENST00000516918 ZNF561-AS1K7EIQ3 104 aa4.26□□□□□ -1.73
SCARNA11.1-201ENST00000516918 SCO1O75880 301 aa4.26□□□□□ -1.73
SCARNA11.1-201ENST00000516918 MALP21145 153 aa4.26□□□□□ -1.73
SCARNA11.1-201ENST00000516918 PTTG1IPP53801 180 aa4.26□□□□□ -1.73
SCARNA11.1-201ENST00000516918 C1orf137Q5JT78 98 aa4.26□□□□□ -1.73
SCARNA11.1-201ENST00000516918 TIMM17AQ99595 171 aa4.26□□□□□ -1.73
SCARNA11.1-201ENST00000516918 KRTAP9-2Q9BYQ4 174 aa4.26□□□□□ -1.73
SCARNA11.1-201ENST00000516918 PKIGQ9Y2B9 76 aa4.26□□□□□ -1.73
SCARNA11.1-201ENST00000516918 LOC107984640A0A0U1RRK4 108 aa4.25□□□□□ -1.73
SCARNA11.1-201ENST00000516918 ATP6V1G1O75348 118 aa4.25□□□□□ -1.73
SCARNA11.1-201ENST00000516918 HSBP1O75506 76 aa4.25□□□□□ -1.73
SCARNA11.1-201ENST00000516918 ATP5LO75964 103 aa4.25□□□□□ -1.73
SCARNA11.1-201ENST00000516918 APOMO95445 188 aa4.25□□□□□ -1.73
SCARNA11.1-201ENST00000516918 NDUFA6P56556 154 aa4.25□□□□□ -1.73
SCARNA11.1-201ENST00000516918 C9orf116Q5BN46 136 aaPredicted RBP4.25□□□□□ -1.73
SCARNA11.1-201ENST00000516918 PHF5AQ7RTV0 110 aaKnown RBP4.25□□□□□ -1.73
SCARNA11.1-201ENST00000516918 OPRPNQ99935 248 aaPredicted RBP4.25□□□□□ -1.73
SCARNA11.1-201ENST00000516918 IGLV4-69A0A075B6H9 119 aa4.24□□□□□ -1.73
SCARNA11.1-201ENST00000516918 IGLV4-3A0A075B6K6 122 aa4.24□□□□□ -1.73
SCARNA11.1-201ENST00000516918 IFITM10A6NMD0 228 aa4.24□□□□□ -1.73
SCARNA11.1-201ENST00000516918 COX7A2LO14548 114 aa4.24□□□□□ -1.73
SCARNA11.1-201ENST00000516918 HBDP02042 147 aa4.24□□□□□ -1.73
SCARNA11.1-201ENST00000516918 PMVKQ15126 192 aa4.24□□□□□ -1.73
SCARNA11.1-201ENST00000516918 PRR4Q16378 134 aa4.24□□□□□ -1.73
SCARNA11.1-201ENST00000516918 AMELXQ99217 191 aa4.24□□□□□ -1.73
SCARNA11.1-201ENST00000516918 CST9LQ9H4G1 147 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms