RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 AMN1Q8IY45 258 aa4.99□□□□□ -1.61
SCARNA20.3-201ENST00000516913 TRAV9-1A0A075B6T8 112 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 A8MWL6 223 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 C1orf196B1AJZ1 125 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 HIST1H2BKO60814 126 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 HIST1H2BJP06899 126 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 PMCHP20382 165 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 HIST1H2BOP23527 126 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 HIST1H2BBP33778 126 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 CAMPP49913 170 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 HIST1H2BDP58876 126 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 HIST1H2BCP62807 126 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 FABP9Q0Z7S8 132 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 HIST2H2BEQ16778 126 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 Q6ZUT4 128 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 HIST1H2BHQ93079 126 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 BTF3L4Q96K17 158 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 HIST1H2BNQ99877 126 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 HIST1H2BMQ99879 126 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 BIN3Q9NQY0 253 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 NAT8BQ9UHF3 227 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 UBE2D4Q9Y2X8 147 aa4.98□□□□□ -1.61
SCARNA20.3-201ENST00000516913 XKRY2A2RUG3 117 aa4.97□□□□□ -1.61
SCARNA20.3-201ENST00000516913 NUPR1O60356 82 aa4.97□□□□□ -1.61
SCARNA20.3-201ENST00000516913 ZNF25P17030 456 aaPredicted RBP4.97□□□□□ -1.61
SCARNA20.3-201ENST00000516913 KIAA1644Q3SXP7 199 aa4.97□□□□□ -1.61
SCARNA20.3-201ENST00000516913 REG3GQ6UW15 175 aa4.97□□□□□ -1.61
SCARNA20.3-201ENST00000516913 TRAPPC1Q9Y5R8 145 aa4.97□□□□□ -1.61
SCARNA20.3-201ENST00000516913 TRAV13-1A0A0B4J241 112 aa4.96□□□□□ -1.62
SCARNA20.3-201ENST00000516913 C5orf52A6NGY3 159 aa4.96□□□□□ -1.62
SCARNA20.3-201ENST00000516913 IFITM10A6NMD0 228 aa4.96□□□□□ -1.62
SCARNA20.3-201ENST00000516913 NDUFA6P56556 154 aa4.96□□□□□ -1.62
SCARNA20.3-201ENST00000516913 SNRPEP62304 92 aaKnown RBP4.96□□□□□ -1.62
SCARNA20.3-201ENST00000516913 RPL39P62891 51 aaKnown RBP4.96□□□□□ -1.62
SCARNA20.3-201ENST00000516913 KIAA0087Q14695 138 aa4.96□□□□□ -1.62
SCARNA20.3-201ENST00000516913 C1orf137Q5JT78 98 aa4.96□□□□□ -1.62
SCARNA20.3-201ENST00000516913 GNB1LQ9BYB4 327 aa4.96□□□□□ -1.62
SCARNA20.3-201ENST00000516913 TMEM191AQ9H0A3 160 aa4.96□□□□□ -1.62
SCARNA20.3-201ENST00000516913 MRPL18Q9H0U6 180 aaKnown RBP4.96□□□□□ -1.62
SCARNA20.3-201ENST00000516913 ST20Q9HBF5 79 aa4.96□□□□□ -1.62
SCARNA20.3-201ENST00000516913 IGHV3OR16-9A0A0B4J2B5 98 aa4.95□□□□□ -1.62
SCARNA20.3-201ENST00000516913 LOC107984640A0A0U1RRK4 108 aa4.95□□□□□ -1.62
SCARNA20.3-201ENST00000516913 ZNF561-AS1K7EIQ3 104 aa4.95□□□□□ -1.62
SCARNA20.3-201ENST00000516913 APOMO95445 188 aa4.95□□□□□ -1.62
SCARNA20.3-201ENST00000516913 IGLV7-43P04211 117 aa4.95□□□□□ -1.62
SCARNA20.3-201ENST00000516913 LINC00310P59036 64 aa4.95□□□□□ -1.62
SCARNA20.3-201ENST00000516913 RAB5BP61020 215 aa4.95□□□□□ -1.62
SCARNA20.3-201ENST00000516913 UNQ6190/PRO20217Q6UXQ8 127 aa4.95□□□□□ -1.62
SCARNA20.3-201ENST00000516913 MRAP2Q96G30 205 aa4.95□□□□□ -1.62
SCARNA20.3-201ENST00000516913 KRTAP9-2Q9BYQ4 174 aa4.95□□□□□ -1.62
SCARNA20.3-201ENST00000516913 LINC00474Q9P2X8 69 aa4.95□□□□□ -1.62
SCARNA20.3-201ENST00000516913 C6orf48Q9UBA6 75 aa4.95□□□□□ -1.62
SCARNA20.3-201ENST00000516913 A0A1B0GUT8 65 aa4.94□□□□□ -1.62
SCARNA20.3-201ENST00000516913 COX7A2LO14548 114 aa4.94□□□□□ -1.62
SCARNA20.3-201ENST00000516913 HBBP68871 147 aa4.94□□□□□ -1.62
SCARNA20.3-201ENST00000516913 SS18Q15532 418 aa4.94□□□□□ -1.62
SCARNA20.3-201ENST00000516913 MRPL51Q4U2R6 128 aaKnown RBP4.94□□□□□ -1.62
SCARNA20.3-201ENST00000516913 LCE2AQ5TA79 106 aaPredicted RBP4.94□□□□□ -1.62
SCARNA20.3-201ENST00000516913 C2orf48Q96LS8 159 aa4.94□□□□□ -1.62
SCARNA20.3-201ENST00000516913 MT-ND6P03923 174 aa4.93□□□□□ -1.62
SCARNA20.3-201ENST00000516913 RPL18AQ02543 176 aaKnown RBP4.93□□□□□ -1.62
SCARNA20.3-201ENST00000516913 C9orf129Q5T035 196 aaKnown RBP4.93□□□□□ -1.62
SCARNA20.3-201ENST00000516913 ZC2HC1BQ5TFG8 222 aa4.93□□□□□ -1.62
SCARNA20.3-201ENST00000516913 ATP5L2Q7Z4Y8 100 aa4.93□□□□□ -1.62
SCARNA20.3-201ENST00000516913 URB1-AS1Q96HZ7 61 aa4.93□□□□□ -1.62
SCARNA20.3-201ENST00000516913 TMEM101Q96IK0 257 aa4.93□□□□□ -1.62
SCARNA20.3-201ENST00000516913 CAMK2N2Q96S95 79 aa4.93□□□□□ -1.62
SCARNA20.3-201ENST00000516913 ALKBH7Q9BT30 221 aaPredicted RBP4.93□□□□□ -1.62
SCARNA20.3-201ENST00000516913 CSDC2Q9Y534 153 aaKnown RBP4.93□□□□□ -1.62
SCARNA20.3-201ENST00000516913 H0Y9J4 135 aa4.92□□□□□ -1.62
SCARNA20.3-201ENST00000516913 VCYO14598 125 aa4.92□□□□□ -1.62
SCARNA20.3-201ENST00000516913 SUMO2P61956 95 aaKnown RBP4.92□□□□□ -1.62
SCARNA20.3-201ENST00000516913 SPAG11BQ08648 103 aa4.92□□□□□ -1.62
SCARNA20.3-201ENST00000516913 RNF151Q2KHN1 245 aa4.92□□□□□ -1.62
SCARNA20.3-201ENST00000516913 COA6Q5JTJ3 125 aaKnown RBP4.92□□□□□ -1.62
SCARNA20.3-201ENST00000516913 C2orf82Q6UX34 121 aa4.92□□□□□ -1.62
SCARNA20.3-201ENST00000516913 HIST3H2BBQ8N257 126 aa4.92□□□□□ -1.62
SCARNA20.3-201ENST00000516913 RIGQ13278 110 aa4.91□□□□□ -1.62
SCARNA20.3-201ENST00000516913 COX19Q49B96 90 aa4.91□□□□□ -1.62
SCARNA20.3-201ENST00000516913 PDZD11Q5EBL8 140 aa4.91□□□□□ -1.62
SCARNA20.3-201ENST00000516913 FAM104BQ5XKR9 115 aa4.91□□□□□ -1.62
SCARNA20.3-201ENST00000516913 MRPL35Q9NZE8 188 aaKnown RBP4.91□□□□□ -1.62
SCARNA20.3-201ENST00000516913 A0A087WZ39 114 aa4.9□□□□□ -1.63
SCARNA20.3-201ENST00000516913 NPYP01303 97 aa4.9□□□□□ -1.63
SCARNA20.3-201ENST00000516913 TLX1NBP0CAT3 122 aa4.9□□□□□ -1.63
SCARNA20.3-201ENST00000516913 MALP21145 153 aa4.9□□□□□ -1.63
SCARNA20.3-201ENST00000516913 GAGE2EQ4V326 116 aa4.9□□□□□ -1.63
SCARNA20.3-201ENST00000516913 SMIM15Q7Z3B0 74 aa4.9□□□□□ -1.63
SCARNA20.3-201ENST00000516913 FAM19A5Q7Z5A7 132 aaPredicted RBP4.9□□□□□ -1.63
SCARNA20.3-201ENST00000516913 C18orf32Q8TCD1 76 aa4.9□□□□□ -1.63
SCARNA20.3-201ENST00000516913 ORAOV1Q8WV07 137 aa4.9□□□□□ -1.63
SCARNA20.3-201ENST00000516913 TIMM21Q9BVV7 248 aa4.9□□□□□ -1.63
SCARNA20.3-201ENST00000516913 GAGE2DQ9UEU5 116 aa4.9□□□□□ -1.63
SCARNA20.3-201ENST00000516913 A0A087X002 238 aa4.89□□□□□ -1.63
SCARNA20.3-201ENST00000516913 A0A1B0GW15 77 aa4.89□□□□□ -1.63
SCARNA20.3-201ENST00000516913 TCAPO15273 167 aa4.89□□□□□ -1.63
SCARNA20.3-201ENST00000516913 SERF1AO75920 110 aa4.89□□□□□ -1.63
SCARNA20.3-201ENST00000516913 S100A6P06703 90 aa4.89□□□□□ -1.63
SCARNA20.3-201ENST00000516913 LINC00242Q5T6M2 205 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms