RNA–Protein interactions for RNA: ENST00000515835.2

PDE4D-225, Transcript of phosphodiesterase 4D, humanhuman

TSL 4 BASIC

Gene PDE4D, Length 590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-225ENST00000515835 CTRLP40313 264 aa3.8□□□□□ -1.8
PDE4D-225ENST00000515835 REG3AQ06141 175 aa3.8□□□□□ -1.8
PDE4D-225ENST00000515835 COTL1Q14019 142 aa3.8□□□□□ -1.8
PDE4D-225ENST00000515835 FAM74A3Q4VXF1 159 aa3.8□□□□□ -1.8
PDE4D-225ENST00000515835 TEX261Q6UWH6 196 aa3.8□□□□□ -1.8
PDE4D-225ENST00000515835 LYZL1Q6UWQ5 148 aa3.8□□□□□ -1.8
PDE4D-225ENST00000515835 C20orf203Q8NBC4 194 aa3.8□□□□□ -1.8
PDE4D-225ENST00000515835 RNF185Q96GF1 192 aa3.8□□□□□ -1.8
PDE4D-225ENST00000515835 LINC00167Q96N53 147 aa3.8□□□□□ -1.8
PDE4D-225ENST00000515835 TMEM250H0YL14 139 aa3.79□□□□□ -1.8
PDE4D-225ENST00000515835 NCR2O95944 276 aa3.79□□□□□ -1.8
PDE4D-225ENST00000515835 NKX2-5P52952 324 aaPredicted RBP3.79□□□□□ -1.8
PDE4D-225ENST00000515835 CIRBPQ14011 172 aaKnown RBP3.79□□□□□ -1.8
PDE4D-225ENST00000515835 SDIM1Q6ZPB5 146 aa3.79□□□□□ -1.8
PDE4D-225ENST00000515835 SMIM15Q7Z3B0 74 aa3.79□□□□□ -1.8
PDE4D-225ENST00000515835 RPP21Q9H633 154 aaKnown RBP3.79□□□□□ -1.8
PDE4D-225ENST00000515835 DNAH8Q96JB1 4490 aa3.78□□□□□ -1.8
PDE4D-225ENST00000515835 IGLV4-60A0A075B6I1 120 aa3.78□□□□□ -1.8
PDE4D-225ENST00000515835 IGHV3-64A0A075B6Q5 118 aa3.78□□□□□ -1.8
PDE4D-225ENST00000515835 UBE2L6O14933 153 aa3.78□□□□□ -1.8
PDE4D-225ENST00000515835 FOXA3P55318 350 aaPredicted RBP3.78□□□□□ -1.8
PDE4D-225ENST00000515835 RPL37AP61513 92 aaKnown RBP3.78□□□□□ -1.8
PDE4D-225ENST00000515835 CLPSL2Q6UWE3 100 aa3.78□□□□□ -1.8
PDE4D-225ENST00000515835 FAM231DQ6ZW35 169 aa3.78□□□□□ -1.8
PDE4D-225ENST00000515835 GATD1Q8NB37 220 aa3.78□□□□□ -1.8
PDE4D-225ENST00000515835 LYPD6BQ8NI32 183 aa3.78□□□□□ -1.8
PDE4D-225ENST00000515835 TRBV6-5A0A0K0K1A5 114 aa3.77□□□□□ -1.81
PDE4D-225ENST00000515835 A8MWL6 223 aa3.77□□□□□ -1.81
PDE4D-225ENST00000515835 F8WDY8 70 aa3.77□□□□□ -1.81
PDE4D-225ENST00000515835 K7EN84 100 aa3.77□□□□□ -1.81
PDE4D-225ENST00000515835 ZNF25P17030 456 aaPredicted RBP3.77□□□□□ -1.81
PDE4D-225ENST00000515835 Q6ZVH6 145 aa3.77□□□□□ -1.81
PDE4D-225ENST00000515835 FLG2Q5D862 2391 aaPredicted RBP3.76□□□□□ -1.81
PDE4D-225ENST00000515835 IGLV10-54A0A075B6I4 117 aa3.76□□□□□ -1.81
PDE4D-225ENST00000515835 PANO1I0J062 215 aa3.76□□□□□ -1.81
PDE4D-225ENST00000515835 GATCO43716 136 aaKnown RBP3.76□□□□□ -1.81
PDE4D-225ENST00000515835 ZNF861PO60384 105 aa3.76□□□□□ -1.81
PDE4D-225ENST00000515835 Q6ZRU5 148 aa3.76□□□□□ -1.81
PDE4D-225ENST00000515835 BORCS7Q96B45 105 aa3.76□□□□□ -1.81
PDE4D-225ENST00000515835 RNASE7Q9H1E1 156 aaKnown RBP3.76□□□□□ -1.81
PDE4D-225ENST00000515835 PKIGQ9Y2B9 76 aa3.76□□□□□ -1.81
PDE4D-225ENST00000515835 GVQW2A0A096LPI5 108 aaPredicted RBP3.75□□□□□ -1.81
PDE4D-225ENST00000515835 SDHAF1A6NFY7 115 aa3.75□□□□□ -1.81
PDE4D-225ENST00000515835 I3L3M4 83 aa3.75□□□□□ -1.81
PDE4D-225ENST00000515835 APCSP02743 223 aa3.75□□□□□ -1.81
PDE4D-225ENST00000515835 RPS10P46783 165 aaKnown RBP3.75□□□□□ -1.81
PDE4D-225ENST00000515835 AMMECR1LQ6DCA0 310 aa3.75□□□□□ -1.81
PDE4D-225ENST00000515835 ERASQ7Z444 233 aa3.75□□□□□ -1.81
PDE4D-225ENST00000515835 AKAP14Q86UN6 197 aa3.75□□□□□ -1.81
PDE4D-225ENST00000515835 OR5A1Q8NGJ0 315 aa3.75□□□□□ -1.81
PDE4D-225ENST00000515835 SPACA4Q8TDM5 124 aa3.75□□□□□ -1.81
PDE4D-225ENST00000515835 BTF3L4Q96K17 158 aa3.75□□□□□ -1.81
PDE4D-225ENST00000515835 PLAC8Q9NZF1 115 aa3.75□□□□□ -1.81
PDE4D-225ENST00000515835 TRAV26-2A0A0B4J265 109 aa3.74□□□□□ -1.81
PDE4D-225ENST00000515835 A0A1B0GUT8 65 aa3.74□□□□□ -1.81
PDE4D-225ENST00000515835 CCL25O15444 150 aa3.74□□□□□ -1.81
PDE4D-225ENST00000515835 PPP1R17O96001 155 aa3.74□□□□□ -1.81
PDE4D-225ENST00000515835 FGF6P10767 208 aa3.74□□□□□ -1.81
PDE4D-225ENST00000515835 ESDP10768 282 aa3.74□□□□□ -1.81
PDE4D-225ENST00000515835 PMCHP20382 165 aa3.74□□□□□ -1.81
PDE4D-225ENST00000515835 SMAGPQ0VAQ4 97 aa3.74□□□□□ -1.81
PDE4D-225ENST00000515835 KRTAP13-3Q3SY46 172 aa3.74□□□□□ -1.81
PDE4D-225ENST00000515835 MRPL52Q86TS9 123 aaKnown RBP3.74□□□□□ -1.81
PDE4D-225ENST00000515835 LINC01551Q86U37 167 aa3.74□□□□□ -1.81
PDE4D-225ENST00000515835 C15orf56Q8N910 161 aa3.74□□□□□ -1.81
PDE4D-225ENST00000515835 C7orf33Q8WU49 177 aa3.74□□□□□ -1.81
PDE4D-225ENST00000515835 TSKUQ8WUA8 353 aa3.74□□□□□ -1.81
PDE4D-225ENST00000515835 RPL39LQ96EH5 51 aaKnown RBP3.74□□□□□ -1.81
PDE4D-225ENST00000515835 MRAP2Q96G30 205 aa3.74□□□□□ -1.81
PDE4D-225ENST00000515835 TMEM101Q96IK0 257 aa3.74□□□□□ -1.81
PDE4D-225ENST00000515835 TMEM191AQ9H0A3 160 aa3.74□□□□□ -1.81
PDE4D-225ENST00000515835 OSTCQ9NRP0 149 aa3.74□□□□□ -1.81
PDE4D-225ENST00000515835 LINC00474Q9P2X8 69 aa3.74□□□□□ -1.81
PDE4D-225ENST00000515835 HMCN2Q8NDA2 5059 aa3.74□□□□□ -1.81
PDE4D-225ENST00000515835 TRBV27A0A0K0K1C4 114 aa3.73□□□□□ -1.81
PDE4D-225ENST00000515835 POLR2KP53803 58 aaKnown RBP3.73□□□□□ -1.81
PDE4D-225ENST00000515835 RNASEKQ6P5S7 137 aaKnown RBP3.73□□□□□ -1.81
PDE4D-225ENST00000515835 ALKAL2Q6UX46 152 aa3.73□□□□□ -1.81
PDE4D-225ENST00000515835 CHCHD10Q8WYQ3 142 aaPredicted RBP3.73□□□□□ -1.81
PDE4D-225ENST00000515835 DPH3Q96FX2 82 aa3.73□□□□□ -1.81
PDE4D-225ENST00000515835 SMIM7Q9BQ49 75 aa3.73□□□□□ -1.81
PDE4D-225ENST00000515835 EIF5A2Q9GZV4 153 aaKnown RBP3.73□□□□□ -1.81
PDE4D-225ENST00000515835 ST20Q9HBF5 79 aa3.73□□□□□ -1.81
PDE4D-225ENST00000515835 PRO0461Q9UI25 63 aa3.73□□□□□ -1.81
PDE4D-225ENST00000515835 CSDC2Q9Y534 153 aaKnown RBP3.73□□□□□ -1.81
PDE4D-225ENST00000515835 LRP1Q07954 4544 aaKnown RBP3.72□□□□□ -1.81
PDE4D-225ENST00000515835 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.72□□□□□ -1.81
PDE4D-225ENST00000515835 IGHV1-58A0A0C4DH39 117 aa3.72□□□□□ -1.81
PDE4D-225ENST00000515835 LINC00959A0A1B0GUT2 108 aa3.72□□□□□ -1.81
PDE4D-225ENST00000515835 IGKV2-29A2NJV5 120 aaPredicted RBP3.72□□□□□ -1.81
PDE4D-225ENST00000515835 C7orf77A4D0Y5 90 aa3.72□□□□□ -1.81
PDE4D-225ENST00000515835 ZNF727A8MUV8 499 aa3.72□□□□□ -1.81
PDE4D-225ENST00000515835 HIGD1CA8MV81 97 aa3.72□□□□□ -1.81
PDE4D-225ENST00000515835 RAB4AP20338 218 aa3.72□□□□□ -1.81
PDE4D-225ENST00000515835 HNRNPA3P51991 378 aaKnown RBP3.72□□□□□ -1.81
PDE4D-225ENST00000515835 COX6A2Q02221 97 aa3.72□□□□□ -1.81
PDE4D-225ENST00000515835 SS18Q15532 418 aa3.72□□□□□ -1.81
PDE4D-225ENST00000515835 LINC01561Q8N1V8 128 aa3.72□□□□□ -1.81
PDE4D-225ENST00000515835 CDC42SE2Q9NRR3 84 aa3.72□□□□□ -1.81
PDE4D-225ENST00000515835 IGKV3OR2-268A0A0C4DH90 116 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms