RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 NKX6-2Q9C056 277 aaPredicted RBP6.84□□□□□ -1.31
SMAD1-216ENST00000515527 NAP1L6A6NFF2 107 aa6.83□□□□□ -1.32
SMAD1-216ENST00000515527 IGLC6P0CF74 106 aa6.83□□□□□ -1.32
SMAD1-216ENST00000515527 AKR1C3P42330 323 aa6.83□□□□□ -1.32
SMAD1-216ENST00000515527 hCG_2014768A0A024R1R8 64 aa6.82□□□□□ -1.32
SMAD1-216ENST00000515527 FAM74A7A6NL05 159 aa6.82□□□□□ -1.32
SMAD1-216ENST00000515527 Q6ZUT4 128 aa6.82□□□□□ -1.32
SMAD1-216ENST00000515527 RNASE7Q9H1E1 156 aaKnown RBP6.82□□□□□ -1.32
SMAD1-216ENST00000515527 HSPB11Q9Y547 144 aa6.82□□□□□ -1.32
SMAD1-216ENST00000515527 INMT-MINDY4F8WBC2 141 aa6.81□□□□□ -1.32
SMAD1-216ENST00000515527 IGLV6-57P01721 117 aa6.81□□□□□ -1.32
SMAD1-216ENST00000515527 SMAGPQ0VAQ4 97 aa6.81□□□□□ -1.32
SMAD1-216ENST00000515527 SEC22CQ9BRL7 303 aa6.81□□□□□ -1.32
SMAD1-216ENST00000515527 CSDC2Q9Y534 153 aaKnown RBP6.81□□□□□ -1.32
SMAD1-216ENST00000515527 RPL37P61927 97 aaKnown RBP6.8□□□□□ -1.32
SMAD1-216ENST00000515527 NKAPP1Q8N9T2 125 aa6.8□□□□□ -1.32
SMAD1-216ENST00000515527 ACTR3CQ9C0K3 210 aaPredicted RBP6.8□□□□□ -1.32
SMAD1-216ENST00000515527 ZNF706Q9Y5V0 76 aaPredicted RBP6.8□□□□□ -1.32
SMAD1-216ENST00000515527 H0YIZ8 118 aa6.79□□□□□ -1.32
SMAD1-216ENST00000515527 STOML3Q8TAV4 291 aa6.79□□□□□ -1.32
SMAD1-216ENST00000515527 KRTAP2-2Q9BYT5 123 aa6.79□□□□□ -1.32
SMAD1-216ENST00000515527 KRTAP2-1Q9BYU5 128 aa6.79□□□□□ -1.32
SMAD1-216ENST00000515527 RAB19A4D1S5 217 aa6.78□□□□□ -1.32
SMAD1-216ENST00000515527 F2Z2F3 143 aa6.78□□□□□ -1.32
SMAD1-216ENST00000515527 BAGE2Q86Y30 109 aa6.78□□□□□ -1.32
SMAD1-216ENST00000515527 TMEM126AQ9H061 195 aa6.78□□□□□ -1.32
SMAD1-216ENST00000515527 TGIF2-C20orf24A0A0A6YYL0 155 aa6.77□□□□□ -1.33
SMAD1-216ENST00000515527 TMEM238C9JI98 176 aa6.77□□□□□ -1.33
SMAD1-216ENST00000515527 S100A5P33763 92 aa6.77□□□□□ -1.33
SMAD1-216ENST00000515527 MOBPQ13875 183 aa6.77□□□□□ -1.33
SMAD1-216ENST00000515527 TWIST1Q15672 202 aa6.77□□□□□ -1.33
SMAD1-216ENST00000515527 TEX261Q6UWH6 196 aa6.77□□□□□ -1.33
SMAD1-216ENST00000515527 GEMIN7Q9H840 131 aaKnown RBP6.77□□□□□ -1.33
SMAD1-216ENST00000515527 C20orf202A1L168 122 aa6.76□□□□□ -1.33
SMAD1-216ENST00000515527 ATP6V1G1O75348 118 aa6.76□□□□□ -1.33
SMAD1-216ENST00000515527 MBP02144 154 aa6.76□□□□□ -1.33
SMAD1-216ENST00000515527 KRTAP5-9P26371 169 aa6.76□□□□□ -1.33
SMAD1-216ENST00000515527 BTCP35070 178 aa6.76□□□□□ -1.33
SMAD1-216ENST00000515527 ST20Q9HBF5 79 aa6.76□□□□□ -1.33
SMAD1-216ENST00000515527 TMA7Q9Y2S6 64 aaKnown RBP6.76□□□□□ -1.33
SMAD1-216ENST00000515527 V9GYH0 126 aa6.76□□□□□ -1.33
SMAD1-216ENST00000515527 IGLV9-49A0A0B4J1Y8 123 aa6.75□□□□□ -1.33
SMAD1-216ENST00000515527 CCDC160A6NGH7 325 aa6.75□□□□□ -1.33
SMAD1-216ENST00000515527 SCO1O75880 301 aa6.75□□□□□ -1.33
SMAD1-216ENST00000515527 IFNA1P01562 189 aa6.75□□□□□ -1.33
SMAD1-216ENST00000515527 ATP6V0CP27449 155 aa6.75□□□□□ -1.33
SMAD1-216ENST00000515527 CKS1BP61024 79 aa6.75□□□□□ -1.33
SMAD1-216ENST00000515527 CNPY1Q3B7I2 92 aa6.75□□□□□ -1.33
SMAD1-216ENST00000515527 LINC01551Q86U37 167 aa6.75□□□□□ -1.33
SMAD1-216ENST00000515527 CENPXA8MT69 81 aa6.74□□□□□ -1.33
SMAD1-216ENST00000515527 PRSS2P07478 247 aa6.74□□□□□ -1.33
SMAD1-216ENST00000515527 FCER1GP30273 86 aa6.74□□□□□ -1.33
SMAD1-216ENST00000515527 FHITP49789 147 aa6.74□□□□□ -1.33
SMAD1-216ENST00000515527 CST9LP1Q5W188 147 aa6.74□□□□□ -1.33
SMAD1-216ENST00000515527 TRBV6-5A0A0K0K1A5 114 aa6.73□□□□□ -1.33
SMAD1-216ENST00000515527 SIX6O95475 246 aa6.73□□□□□ -1.33
SMAD1-216ENST00000515527 S100A9P06702 114 aaKnown RBP6.73□□□□□ -1.33
SMAD1-216ENST00000515527 SVIPQ8NHG7 77 aa6.73□□□□□ -1.33
SMAD1-216ENST00000515527 TCEAL7Q9BRU2 100 aa6.73□□□□□ -1.33
SMAD1-216ENST00000515527 TOMM7Q9P0U1 55 aa6.73□□□□□ -1.33
SMAD1-216ENST00000515527 IGLV5-37A0A075B6J1 123 aa6.72□□□□□ -1.33
SMAD1-216ENST00000515527 TRIQKQ629K1 86 aa6.72□□□□□ -1.33
SMAD1-216ENST00000515527 SSBP3-AS1Q7Z2R9 100 aa6.72□□□□□ -1.33
SMAD1-216ENST00000515527 XKRY2A2RUG3 117 aa6.71□□□□□ -1.34
SMAD1-216ENST00000515527 S100A1P23297 94 aa6.71□□□□□ -1.34
SMAD1-216ENST00000515527 SMIM15Q7Z3B0 74 aa6.71□□□□□ -1.34
SMAD1-216ENST00000515527 SLC7A5P1Q8MH63 180 aa6.71□□□□□ -1.34
SMAD1-216ENST00000515527 IFITM10A6NMD0 228 aa6.7□□□□□ -1.34
SMAD1-216ENST00000515527 M0R378 163 aa6.7□□□□□ -1.34
SMAD1-216ENST00000515527 TRBV27A0A0K0K1C4 114 aa6.69□□□□□ -1.34
SMAD1-216ENST00000515527 NPSP0C0P6 89 aa6.69□□□□□ -1.34
SMAD1-216ENST00000515527 SERF2P84101 59 aa6.69□□□□□ -1.34
SMAD1-216ENST00000515527 C6orf226Q5I0X4 101 aa6.69□□□□□ -1.34
SMAD1-216ENST00000515527 PSMG3Q9BT73 122 aaPredicted RBP6.69□□□□□ -1.34
SMAD1-216ENST00000515527 TIMM21Q9BVV7 248 aa6.69□□□□□ -1.34
SMAD1-216ENST00000515527 CTXND1A0A1B0GTU2 59 aa6.68□□□□□ -1.34
SMAD1-216ENST00000515527 POLR2KP53803 58 aaKnown RBP6.68□□□□□ -1.34
SMAD1-216ENST00000515527 ZNF726P1Q15940 193 aa6.68□□□□□ -1.34
SMAD1-216ENST00000515527 FAM231DQ6ZW35 169 aa6.68□□□□□ -1.34
SMAD1-216ENST00000515527 TMEM18Q96B42 140 aa6.68□□□□□ -1.34
SMAD1-216ENST00000515527 TNFSF18Q9UNG2 199 aa6.68□□□□□ -1.34
SMAD1-216ENST00000515527 HBBP68871 147 aa6.67□□□□□ -1.34
SMAD1-216ENST00000515527 TIMM17AQ99595 171 aa6.67□□□□□ -1.34
SMAD1-216ENST00000515527 SCO2A0A1W2PP80 73 aa6.66□□□□□ -1.34
SMAD1-216ENST00000515527 C9orf62Q8N4C0 152 aa6.66□□□□□ -1.34
SMAD1-216ENST00000515527 PPP1R1CQ8WVI7 109 aa6.66□□□□□ -1.34
SMAD1-216ENST00000515527 S100A6P06703 90 aa6.65□□□□□ -1.34
SMAD1-216ENST00000515527 NUDT15Q9NV35 164 aa6.65□□□□□ -1.34
SMAD1-216ENST00000515527 F8VRH5 84 aa6.64□□□□□ -1.35
SMAD1-216ENST00000515527 GAGE2AQ6NT46 116 aa6.64□□□□□ -1.35
SMAD1-216ENST00000515527 C20orf166-AS1Q96NR2 134 aa6.64□□□□□ -1.35
SMAD1-216ENST00000515527 VCYO14598 125 aa6.63□□□□□ -1.35
SMAD1-216ENST00000515527 PFDN1O60925 122 aa6.63□□□□□ -1.35
SMAD1-216ENST00000515527 PET100P0DJ07 73 aa6.63□□□□□ -1.35
SMAD1-216ENST00000515527 NDUFA5Q16718 116 aa6.63□□□□□ -1.35
SMAD1-216ENST00000515527 LINC00483Q53H64 154 aa6.63□□□□□ -1.35
SMAD1-216ENST00000515527 FAM104AQ969W3 186 aa6.63□□□□□ -1.35
SMAD1-216ENST00000515527 ALKBH7Q9BT30 221 aaPredicted RBP6.63□□□□□ -1.35
SMAD1-216ENST00000515527 CNFNQ9BYD5 112 aa6.63□□□□□ -1.35
SMAD1-216ENST00000515527 TMEM238LA0A1B0GVL6 79 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms