RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 SEC11CQ9BY50 192 aa7.27□□□□□ -1.25
VCAN-212ENST00000515397 SPANXA1Q9NS26 97 aa7.27□□□□□ -1.25
VCAN-212ENST00000515397 IGLV4-3A0A075B6K6 122 aa7.26□□□□□ -1.25
VCAN-212ENST00000515397 PRSS47A8MTI9 375 aa7.26□□□□□ -1.25
VCAN-212ENST00000515397 MRPS36P82909 103 aaKnown RBP7.26□□□□□ -1.25
VCAN-212ENST00000515397 STPG4Q8N801 248 aa7.26□□□□□ -1.25
VCAN-212ENST00000515397 GAGE2BQ13066 116 aa7.25□□□□□ -1.25
VCAN-212ENST00000515397 C2orf66Q6UXQ4 117 aa7.25□□□□□ -1.25
VCAN-212ENST00000515397 CAMK2N2Q96S95 79 aa7.25□□□□□ -1.25
VCAN-212ENST00000515397 PLAC8Q9NZF1 115 aa7.25□□□□□ -1.25
VCAN-212ENST00000515397 LAMTOR2Q9Y2Q5 125 aa7.25□□□□□ -1.25
VCAN-212ENST00000515397 IGHV3OR16-9A0A0B4J2B5 98 aa7.24□□□□□ -1.25
VCAN-212ENST00000515397 SPAG11BQ08648 103 aa7.24□□□□□ -1.25
VCAN-212ENST00000515397 ORAOV1Q8WV07 137 aa7.24□□□□□ -1.25
VCAN-212ENST00000515397 RPS10P5Q9NQ39 176 aa7.24□□□□□ -1.25
VCAN-212ENST00000515397 C10orf91Q5T1B1 145 aa7.23□□□□□ -1.25
VCAN-212ENST00000515397 LINC00242Q5T6M2 205 aa7.23□□□□□ -1.25
VCAN-212ENST00000515397 C10orf25Q5T742 122 aa7.23□□□□□ -1.25
VCAN-212ENST00000515397 TMEM141Q96I45 108 aa7.23□□□□□ -1.25
VCAN-212ENST00000515397 CYSLTR1Q9Y271 337 aa7.23□□□□□ -1.25
VCAN-212ENST00000515397 PYGO1Q9Y3Y4 419 aa7.23□□□□□ -1.25
VCAN-212ENST00000515397 APOMO95445 188 aa7.22□□□□□ -1.25
VCAN-212ENST00000515397 S100PP25815 95 aa7.22□□□□□ -1.25
VCAN-212ENST00000515397 UNQ6190/PRO20217Q6UXQ8 127 aa7.22□□□□□ -1.25
VCAN-212ENST00000515397 FAT3Q8TDW7 4589 aa7.21□□□□□ -1.25
VCAN-212ENST00000515397 A0A1W2PNN7 141 aa7.21□□□□□ -1.26
VCAN-212ENST00000515397 KRTAP29-1A8MX34 341 aaPredicted RBP7.21□□□□□ -1.26
VCAN-212ENST00000515397 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.21□□□□□ -1.26
VCAN-212ENST00000515397 UBE2D1P51668 147 aa7.21□□□□□ -1.26
VCAN-212ENST00000515397 FABP9Q0Z7S8 132 aa7.21□□□□□ -1.26
VCAN-212ENST00000515397 ORMDL2Q53FV1 153 aa7.21□□□□□ -1.26
VCAN-212ENST00000515397 TEX43Q6ZNM6 134 aa7.21□□□□□ -1.26
VCAN-212ENST00000515397 LINC00173Q6ZV60 143 aa7.21□□□□□ -1.26
VCAN-212ENST00000515397 C2orf48Q96LS8 159 aa7.21□□□□□ -1.26
VCAN-212ENST00000515397 VCX2Q9H322 139 aa7.21□□□□□ -1.26
VCAN-212ENST00000515397 NXT2Q9NPJ8 142 aaKnown RBP7.21□□□□□ -1.26
VCAN-212ENST00000515397 TGIF2-C20orf24A0A0A6YYL0 155 aa7.2□□□□□ -1.26
VCAN-212ENST00000515397 LOC107984640A0A0U1RRK4 108 aa7.2□□□□□ -1.26
VCAN-212ENST00000515397 IGIPA6NJ69 53 aa7.2□□□□□ -1.26
VCAN-212ENST00000515397 APOC3P02656 99 aa7.2□□□□□ -1.26
VCAN-212ENST00000515397 PTTG1IPP53801 180 aa7.2□□□□□ -1.26
VCAN-212ENST00000515397 RPL18AQ02543 176 aaKnown RBP7.2□□□□□ -1.26
VCAN-212ENST00000515397 ALKBH7Q9BT30 221 aaPredicted RBP7.2□□□□□ -1.26
VCAN-212ENST00000515397 GNB1LQ9BYB4 327 aa7.2□□□□□ -1.26
VCAN-212ENST00000515397 MRPL18Q9H0U6 180 aaKnown RBP7.2□□□□□ -1.26
VCAN-212ENST00000515397 CARHSP1Q9Y2V2 147 aaKnown RBP7.2□□□□□ -1.26
VCAN-212ENST00000515397 PKHD1L1Q86WI1 4243 aa7.19□□□□□ -1.26
VCAN-212ENST00000515397 TRAV9-1A0A075B6T8 112 aa7.19□□□□□ -1.26
VCAN-212ENST00000515397 C2orf82Q6UX34 121 aa7.19□□□□□ -1.26
VCAN-212ENST00000515397 OR10D4PQ8NGN7 298 aa7.19□□□□□ -1.26
VCAN-212ENST00000515397 C7orf33Q8WU49 177 aa7.19□□□□□ -1.26
VCAN-212ENST00000515397 AMELXQ99217 191 aa7.19□□□□□ -1.26
VCAN-212ENST00000515397 A0A087WZ39 114 aa7.18□□□□□ -1.26
VCAN-212ENST00000515397 KIAA0087Q14695 138 aa7.18□□□□□ -1.26
VCAN-212ENST00000515397 RHEBQ15382 184 aa7.18□□□□□ -1.26
VCAN-212ENST00000515397 Q6ZN92 141 aa7.18□□□□□ -1.26
VCAN-212ENST00000515397 TOMM6Q96B49 74 aa7.18□□□□□ -1.26
VCAN-212ENST00000515397 SCGB3A1Q96QR1 104 aa7.18□□□□□ -1.26
VCAN-212ENST00000515397 C2orf88Q9BSF0 95 aa7.18□□□□□ -1.26
VCAN-212ENST00000515397 C6orf48Q9UBA6 75 aa7.18□□□□□ -1.26
VCAN-212ENST00000515397 C9orf116Q5BN46 136 aaPredicted RBP7.17□□□□□ -1.26
VCAN-212ENST00000515397 TOMM7Q9P0U1 55 aa7.17□□□□□ -1.26
VCAN-212ENST00000515397 LINC00474Q9P2X8 69 aa7.17□□□□□ -1.26
VCAN-212ENST00000515397 FAM168BA1KXE4 195 aa7.16□□□□□ -1.26
VCAN-212ENST00000515397 NDUFA1O15239 70 aa7.16□□□□□ -1.26
VCAN-212ENST00000515397 GAGE2EQ4V326 116 aa7.16□□□□□ -1.26
VCAN-212ENST00000515397 Q6ZRP5 223 aa7.16□□□□□ -1.26
VCAN-212ENST00000515397 MRPL35Q9NZE8 188 aaKnown RBP7.16□□□□□ -1.26
VCAN-212ENST00000515397 GAGE2DQ9UEU5 116 aa7.16□□□□□ -1.26
VCAN-212ENST00000515397 K7EMI3 77 aa7.15□□□□□ -1.26
VCAN-212ENST00000515397 OXTP01178 125 aa7.15□□□□□ -1.26
VCAN-212ENST00000515397 PRR3P79522 188 aaKnown RBP7.15□□□□□ -1.26
VCAN-212ENST00000515397 FA2HQ7L5A8 372 aa7.15□□□□□ -1.26
VCAN-212ENST00000515397 PHF5AQ7RTV0 110 aaKnown RBP7.15□□□□□ -1.26
VCAN-212ENST00000515397 CDKN2A-AS1Q9UH64 79 aa7.15□□□□□ -1.26
VCAN-212ENST00000515397 TRAPPC1Q9Y5R8 145 aa7.15□□□□□ -1.26
VCAN-212ENST00000515397 RNF151Q2KHN1 245 aa7.14□□□□□ -1.27
VCAN-212ENST00000515397 ERASQ7Z444 233 aa7.14□□□□□ -1.27
VCAN-212ENST00000515397 TIMM17AQ99595 171 aa7.14□□□□□ -1.27
VCAN-212ENST00000515397 KRTAP3-3Q9BYR6 98 aa7.14□□□□□ -1.27
VCAN-212ENST00000515397 KRTAP3-2Q9BYR7 98 aa7.14□□□□□ -1.27
VCAN-212ENST00000515397 PKIGQ9Y2B9 76 aa7.14□□□□□ -1.27
VCAN-212ENST00000515397 LINC01546A6NGU7 62 aa7.13□□□□□ -1.27
VCAN-212ENST00000515397 PMCHL1Q16048 86 aa7.13□□□□□ -1.27
VCAN-212ENST00000515397 COX19Q49B96 90 aa7.13□□□□□ -1.27
VCAN-212ENST00000515397 URB1-AS1Q96HZ7 61 aa7.13□□□□□ -1.27
VCAN-212ENST00000515397 GEMIN7Q9H840 131 aaKnown RBP7.13□□□□□ -1.27
VCAN-212ENST00000515397 SMCO4Q9NRQ5 59 aa7.13□□□□□ -1.27
VCAN-212ENST00000515397 MT-ND6P03923 174 aa7.12□□□□□ -1.27
VCAN-212ENST00000515397 PRSS2P07478 247 aa7.12□□□□□ -1.27
VCAN-212ENST00000515397 G0S2P27469 103 aa7.12□□□□□ -1.27
VCAN-212ENST00000515397 C6orf226Q5I0X4 101 aa7.12□□□□□ -1.27
VCAN-212ENST00000515397 PAPPA-AS1Q5QFB9 102 aa7.12□□□□□ -1.27
VCAN-212ENST00000515397 FAM19A5Q7Z5A7 132 aaPredicted RBP7.12□□□□□ -1.27
VCAN-212ENST00000515397 KRTAP11-1Q8IUC1 163 aa7.12□□□□□ -1.27
VCAN-212ENST00000515397 LINC00469Q8N7U9 141 aa7.12□□□□□ -1.27
VCAN-212ENST00000515397 CST9LQ9H4G1 147 aa7.12□□□□□ -1.27
VCAN-212ENST00000515397 F8WDY8 70 aa7.11□□□□□ -1.27
VCAN-212ENST00000515397 SNAPINO95295 136 aa7.11□□□□□ -1.27
VCAN-212ENST00000515397 NPSP0C0P6 89 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms