RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 CAMK2N2Q96S95 79 aa15.46■□□□□ 0.07
SNF8-213ENST00000514929 Q6ZRU5 148 aa15.45■□□□□ 0.06
SNF8-213ENST00000514929 TMEM218A2RU14 115 aa15.44■□□□□ 0.06
SNF8-213ENST00000514929 ADCYAP1P18509 176 aa15.44■□□□□ 0.06
SNF8-213ENST00000514929 SPAG11BQ08648 103 aa15.43■□□□□ 0.06
SNF8-213ENST00000514929 Q8N8P6 123 aa15.43■□□□□ 0.06
SNF8-213ENST00000514929 C2orf48Q96LS8 159 aa15.43■□□□□ 0.06
SNF8-213ENST00000514929 IMMP2LQ96T52 175 aa15.43■□□□□ 0.06
SNF8-213ENST00000514929 CTDSP1Q9GZU7 261 aa15.43■□□□□ 0.06
SNF8-213ENST00000514929 PYGO1Q9Y3Y4 419 aa15.43■□□□□ 0.06
SNF8-213ENST00000514929 LOC107984640A0A0U1RRK4 108 aa15.42■□□□□ 0.06
SNF8-213ENST00000514929 PKHD1L1Q86WI1 4243 aa15.41■□□□□ 0.06
SNF8-213ENST00000514929 IGHV3OR16-9A0A0B4J2B5 98 aa15.41■□□□□ 0.06
SNF8-213ENST00000514929 OR10D4PQ8NGN7 298 aa15.41■□□□□ 0.06
SNF8-213ENST00000514929 LRP1Q07954 4544 aaKnown RBP15.4■□□□□ 0.06
SNF8-213ENST00000514929 IGLV4-3A0A075B6K6 122 aa15.4■□□□□ 0.06
SNF8-213ENST00000514929 ORAOV1Q8WV07 137 aa15.4■□□□□ 0.06
SNF8-213ENST00000514929 PTTG1IPP53801 180 aa15.39■□□□□ 0.05
SNF8-213ENST00000514929 GAGE2BQ13066 116 aa15.39■□□□□ 0.05
SNF8-213ENST00000514929 TMEM141Q96I45 108 aa15.39■□□□□ 0.05
SNF8-213ENST00000514929 CYSLTR1Q9Y271 337 aa15.39■□□□□ 0.05
SNF8-213ENST00000514929 TGIF2-C20orf24A0A0A6YYL0 155 aa15.38■□□□□ 0.05
SNF8-213ENST00000514929 ORMDL2Q53FV1 153 aa15.38■□□□□ 0.05
SNF8-213ENST00000514929 C2orf66Q6UXQ4 117 aa15.37■□□□□ 0.05
SNF8-213ENST00000514929 SEC11CQ9BY50 192 aa15.37■□□□□ 0.05
SNF8-213ENST00000514929 TEX43Q6ZNM6 134 aa15.36■□□□□ 0.05
SNF8-213ENST00000514929 NXT2Q9NPJ8 142 aaKnown RBP15.36■□□□□ 0.05
SNF8-213ENST00000514929 FAT3Q8TDW7 4589 aa15.35■□□□□ 0.05
SNF8-213ENST00000514929 TRAV9-1A0A075B6T8 112 aa15.35■□□□□ 0.05
SNF8-213ENST00000514929 K7EMI3 77 aa15.35■□□□□ 0.05
SNF8-213ENST00000514929 Q6ZN92 141 aa15.35■□□□□ 0.05
SNF8-213ENST00000514929 RPL18AQ02543 176 aaKnown RBP15.34■□□□□ 0.05
SNF8-213ENST00000514929 COMMD7Q86VX2 200 aa15.34■□□□□ 0.05
SNF8-213ENST00000514929 C2orf88Q9BSF0 95 aa15.34■□□□□ 0.05
SNF8-213ENST00000514929 A0A0J9YXV3 536 aa15.33■□□□□ 0.04
SNF8-213ENST00000514929 F8WDY8 70 aa15.33■□□□□ 0.04
SNF8-213ENST00000514929 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.33■□□□□ 0.04
SNF8-213ENST00000514929 S100PP25815 95 aa15.33■□□□□ 0.04
SNF8-213ENST00000514929 KIAA1644Q3SXP7 199 aa15.33■□□□□ 0.04
SNF8-213ENST00000514929 LINC00242Q5T6M2 205 aa15.33■□□□□ 0.04
SNF8-213ENST00000514929 NDUFA1O15239 70 aa15.32■□□□□ 0.04
SNF8-213ENST00000514929 PRR3P79522 188 aaKnown RBP15.32■□□□□ 0.04
SNF8-213ENST00000514929 RNF151Q2KHN1 245 aa15.32■□□□□ 0.04
SNF8-213ENST00000514929 MRPL35Q9NZE8 188 aaKnown RBP15.32■□□□□ 0.04
SNF8-213ENST00000514929 A0A087WZ39 114 aa15.31■□□□□ 0.04
SNF8-213ENST00000514929 VCX2Q9H322 139 aa15.31■□□□□ 0.04
SNF8-213ENST00000514929 UBE2D1P51668 147 aa15.3■□□□□ 0.04
SNF8-213ENST00000514929 ZC2HC1BQ5TFG8 222 aa15.3■□□□□ 0.04
SNF8-213ENST00000514929 G0S2P27469 103 aa15.29■□□□□ 0.04
SNF8-213ENST00000514929 NPSP0C0P6 89 aa15.28■□□□□ 0.04
SNF8-213ENST00000514929 LINC00173Q6ZV60 143 aa15.28■□□□□ 0.04
SNF8-213ENST00000514929 AMELXQ99217 191 aa15.28■□□□□ 0.04
SNF8-213ENST00000514929 A0A1W2PNN7 141 aa15.27■□□□□ 0.04
SNF8-213ENST00000514929 IGIPA6NJ69 53 aa15.27■□□□□ 0.04
SNF8-213ENST00000514929 C10orf25Q5T742 122 aa15.27■□□□□ 0.04
SNF8-213ENST00000514929 UNQ6190/PRO20217Q6UXQ8 127 aa15.27■□□□□ 0.04
SNF8-213ENST00000514929 GNB1LQ9BYB4 327 aa15.27■□□□□ 0.04
SNF8-213ENST00000514929 C9orf116Q5BN46 136 aaPredicted RBP15.26■□□□□ 0.03
SNF8-213ENST00000514929 PAPPA-AS1Q5QFB9 102 aa15.25■□□□□ 0.03
SNF8-213ENST00000514929 SERTAD4-AS1Q5TG53 156 aa15.25■□□□□ 0.03
SNF8-213ENST00000514929 KIAA0087Q14695 138 aa15.24■□□□□ 0.03
SNF8-213ENST00000514929 Q6ZRP5 223 aa15.24■□□□□ 0.03
SNF8-213ENST00000514929 C6orf48Q9UBA6 75 aa15.24■□□□□ 0.03
SNF8-213ENST00000514929 COX19Q49B96 90 aa15.23■□□□□ 0.03
SNF8-213ENST00000514929 LINC01561Q8N1V8 128 aa15.23■□□□□ 0.03
SNF8-213ENST00000514929 TOMM6Q96B49 74 aa15.23■□□□□ 0.03
SNF8-213ENST00000514929 TIMM17AQ99595 171 aa15.23■□□□□ 0.03
SNF8-213ENST00000514929 RPS10P5Q9NQ39 176 aa15.23■□□□□ 0.03
SNF8-213ENST00000514929 RHEBQ15382 184 aa15.22■□□□□ 0.03
SNF8-213ENST00000514929 C10orf91Q5T1B1 145 aa15.22■□□□□ 0.03
SNF8-213ENST00000514929 CARHSP1Q9Y2V2 147 aaKnown RBP15.22■□□□□ 0.03
SNF8-213ENST00000514929 TLX1NBP0CAT3 122 aa15.21■□□□□ 0.03
SNF8-213ENST00000514929 ALKBH7Q9BT30 221 aaPredicted RBP15.21■□□□□ 0.03
SNF8-213ENST00000514929 MT-ND6P03923 174 aa15.19■□□□□ 0.02
SNF8-213ENST00000514929 MT1HL1P0DM35 61 aa15.19■□□□□ 0.02
SNF8-213ENST00000514929 SEC11AP67812 179 aa15.19■□□□□ 0.02
SNF8-213ENST00000514929 C2orf82Q6UX34 121 aa15.19■□□□□ 0.02
SNF8-213ENST00000514929 ERASQ7Z444 233 aa15.19■□□□□ 0.02
SNF8-213ENST00000514929 FAM19A3Q7Z5A8 133 aa15.19■□□□□ 0.02
SNF8-213ENST00000514929 PACRGQ96M98 296 aaPredicted RBP15.19■□□□□ 0.02
SNF8-213ENST00000514929 SCGB3A1Q96QR1 104 aa15.19■□□□□ 0.02
SNF8-213ENST00000514929 MRPL18Q9H0U6 180 aaKnown RBP15.19■□□□□ 0.02
SNF8-213ENST00000514929 TRBV30A0A0K0K1B3 111 aa15.18■□□□□ 0.02
SNF8-213ENST00000514929 PRSS2P07478 247 aa15.18■□□□□ 0.02
SNF8-213ENST00000514929 HERVK_113P63121 156 aa15.18■□□□□ 0.02
SNF8-213ENST00000514929 FABP9Q0Z7S8 132 aa15.18■□□□□ 0.02
SNF8-213ENST00000514929 GAGE2EQ4V326 116 aa15.18■□□□□ 0.02
SNF8-213ENST00000514929 GEMIN7Q9H840 131 aaKnown RBP15.18■□□□□ 0.02
SNF8-213ENST00000514929 TOMM7Q9P0U1 55 aa15.18■□□□□ 0.02
SNF8-213ENST00000514929 GAGE2DQ9UEU5 116 aa15.18■□□□□ 0.02
SNF8-213ENST00000514929 SPINK6Q6UWN8 80 aa15.17■□□□□ 0.02
SNF8-213ENST00000514929 PHF5AQ7RTV0 110 aaKnown RBP15.17■□□□□ 0.02
SNF8-213ENST00000514929 LINC01549A6NIU2 74 aa15.15■□□□□ 0.02
SNF8-213ENST00000514929 SMCO4Q9NRQ5 59 aa15.15■□□□□ 0.02
SNF8-213ENST00000514929 CDKN2A-AS1Q9UH64 79 aa15.15■□□□□ 0.02
SNF8-213ENST00000514929 CKS1BP61024 79 aa15.14■□□□□ 0.01
SNF8-213ENST00000514929 C6orf226Q5I0X4 101 aa15.14■□□□□ 0.01
SNF8-213ENST00000514929 FA2HQ7L5A8 372 aa15.14■□□□□ 0.01
SNF8-213ENST00000514929 PSORS1C2Q9UIG4 136 aa15.14■□□□□ 0.01
SNF8-213ENST00000514929 FAM168BA1KXE4 195 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms