RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 ERC2-IT1O76042 136 aa4.94□□□□□ -1.62
NIPBL-208ENST00000514335 UBALD1Q8TB05 177 aa4.94□□□□□ -1.62
NIPBL-208ENST00000514335 LIMD2Q9BT23 127 aa4.94□□□□□ -1.62
NIPBL-208ENST00000514335 ITPR3Q14573 2671 aa4.94□□□□□ -1.62
NIPBL-208ENST00000514335 MGAQ8IWI9 3026 aa4.94□□□□□ -1.62
NIPBL-208ENST00000514335 PCNX1Q96RV3 2341 aa4.94□□□□□ -1.62
NIPBL-208ENST00000514335 SORL1Q92673 2214 aa4.93□□□□□ -1.62
NIPBL-208ENST00000514335 IGLV2-18A0A075B6J9 118 aa4.93□□□□□ -1.62
NIPBL-208ENST00000514335 NOTCH2Q04721 2471 aa4.93□□□□□ -1.62
NIPBL-208ENST00000514335 MALRD1Q5VYJ5 2156 aa4.93□□□□□ -1.62
NIPBL-208ENST00000514335 IGHV3-20A0A0C4DH32 117 aa4.93□□□□□ -1.62
NIPBL-208ENST00000514335 KALRNO60229 2985 aa4.92□□□□□ -1.62
NIPBL-208ENST00000514335 C22orf34Q6ZV56 151 aa4.92□□□□□ -1.62
NIPBL-208ENST00000514335 Q8N9P0 234 aaPredicted RBP4.92□□□□□ -1.62
NIPBL-208ENST00000514335 OBSCN-AS1Q96MR7 158 aa4.92□□□□□ -1.62
NIPBL-208ENST00000514335 ATP6V0E1O15342 81 aa4.92□□□□□ -1.62
NIPBL-208ENST00000514335 TMEM190Q8WZ59 177 aa4.92□□□□□ -1.62
NIPBL-208ENST00000514335 LOC400499M0QZD8 3231 aa4.91□□□□□ -1.62
NIPBL-208ENST00000514335 IGHV3OR16-12A0A075B7B8 117 aa4.91□□□□□ -1.62
NIPBL-208ENST00000514335 LINC00114Q6XXX2 140 aa4.91□□□□□ -1.62
NIPBL-208ENST00000514335 Q8NAQ8 132 aa4.91□□□□□ -1.62
NIPBL-208ENST00000514335 TRAV21A0A0B4J279 112 aa4.91□□□□□ -1.62
NIPBL-208ENST00000514335 SOCS3O14543 225 aa4.91□□□□□ -1.62
NIPBL-208ENST00000514335 LY6G6DO95868 133 aa4.91□□□□□ -1.62
NIPBL-208ENST00000514335 PRB2P02812 416 aaPredicted RBP4.91□□□□□ -1.62
NIPBL-208ENST00000514335 IGHV1-8P0DP01 117 aa4.91□□□□□ -1.62
NIPBL-208ENST00000514335 C11orf71Q6IPW1 123 aa4.91□□□□□ -1.62
NIPBL-208ENST00000514335 HIGD2AQ9BW72 106 aa4.91□□□□□ -1.62
NIPBL-208ENST00000514335 KLK15Q9H2R5 256 aa4.91□□□□□ -1.62
NIPBL-208ENST00000514335 CASC2Q6XLA1 102 aa4.9□□□□□ -1.62
NIPBL-208ENST00000514335 Q8N3U1 123 aa4.9□□□□□ -1.62
NIPBL-208ENST00000514335 ICE1Q9Y2F5 2266 aa4.9□□□□□ -1.63
NIPBL-208ENST00000514335 IGLV3-16A0A075B6K0 115 aa4.9□□□□□ -1.63
NIPBL-208ENST00000514335 IGHV3-72A0A0B4J1Y9 119 aa4.9□□□□□ -1.63
NIPBL-208ENST00000514335 CTSGP08311 255 aa4.9□□□□□ -1.63
NIPBL-208ENST00000514335 CHTF8P0CG12 524 aa4.9□□□□□ -1.63
NIPBL-208ENST00000514335 LINC01547P58512 204 aaPredicted RBP4.9□□□□□ -1.63
NIPBL-208ENST00000514335 CSAG1Q6PB30 78 aa4.9□□□□□ -1.63
NIPBL-208ENST00000514335 IGLV4-69A0A075B6H9 119 aa4.89□□□□□ -1.63
NIPBL-208ENST00000514335 IGKV3-11P04433 115 aa4.89□□□□□ -1.63
NIPBL-208ENST00000514335 PIGYQ3MUY2 71 aa4.89□□□□□ -1.63
NIPBL-208ENST00000514335 CNTRLQ7Z7A1 2325 aa4.89□□□□□ -1.63
NIPBL-208ENST00000514335 CNEP1R1Q8N9A8 125 aa4.89□□□□□ -1.63
NIPBL-208ENST00000514335 ZNF625Q96I27 306 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-208ENST00000514335 LCE2BO14633 110 aa4.89□□□□□ -1.63
NIPBL-208ENST00000514335 P0C880 135 aa4.89□□□□□ -1.63
NIPBL-208ENST00000514335 ZNF833PQ6ZTB9 187 aa4.89□□□□□ -1.63
NIPBL-208ENST00000514335 ABCA2Q9BZC7 2435 aa4.88□□□□□ -1.63
NIPBL-208ENST00000514335 RP1P56715 2156 aa4.88□□□□□ -1.63
NIPBL-208ENST00000514335 CLPSL1A2RUU4 121 aa4.88□□□□□ -1.63
NIPBL-208ENST00000514335 NCR3O14931 201 aa4.88□□□□□ -1.63
NIPBL-208ENST00000514335 P0C879 139 aa4.88□□□□□ -1.63
NIPBL-208ENST00000514335 LITAFQ99732 161 aa4.88□□□□□ -1.63
NIPBL-208ENST00000514335 UBL5Q9BZL1 73 aa4.88□□□□□ -1.63
NIPBL-208ENST00000514335 NDUFA4L2Q9NRX3 87 aa4.88□□□□□ -1.63
NIPBL-208ENST00000514335 USP9YO00507 2555 aaPredicted RBP4.87□□□□□ -1.63
NIPBL-208ENST00000514335 PROP1O75360 226 aa4.87□□□□□ -1.63
NIPBL-208ENST00000514335 MSRB1Q9NZV6 116 aa4.87□□□□□ -1.63
NIPBL-208ENST00000514335 MED13LQ71F56 2210 aa4.87□□□□□ -1.63
NIPBL-208ENST00000514335 A0A0J9YXY3 114 aa4.87□□□□□ -1.63
NIPBL-208ENST00000514335 LOC101927531A0A1B0GV80 90 aa4.87□□□□□ -1.63
NIPBL-208ENST00000514335 DEFB133Q30KQ1 61 aa4.87□□□□□ -1.63
NIPBL-208ENST00000514335 Q6ZR54 194 aa4.87□□□□□ -1.63
NIPBL-208ENST00000514335 Q86TA4 180 aa4.87□□□□□ -1.63
NIPBL-208ENST00000514335 DEFB119Q8N690 84 aa4.87□□□□□ -1.63
NIPBL-208ENST00000514335 POLQO75417 2590 aa4.87□□□□□ -1.63
NIPBL-208ENST00000514335 RPL27AP46776 148 aaKnown RBP4.86□□□□□ -1.63
NIPBL-208ENST00000514335 PRB3Q04118 309 aaPredicted RBP4.86□□□□□ -1.63
NIPBL-208ENST00000514335 DEFB109BQ30KR1 87 aa4.86□□□□□ -1.63
NIPBL-208ENST00000514335 ZFAND2AQ8N6M9 145 aa4.86□□□□□ -1.63
NIPBL-208ENST00000514335 F8P00451 2351 aa4.86□□□□□ -1.63
NIPBL-208ENST00000514335 TMEM14CQ9P0S9 112 aa4.86□□□□□ -1.63
NIPBL-208ENST00000514335 IGHV3-38A0A0C4DH36 116 aa4.85□□□□□ -1.63
NIPBL-208ENST00000514335 TSHBP01222 138 aa4.85□□□□□ -1.63
NIPBL-208ENST00000514335 DSCR9P59020 149 aa4.85□□□□□ -1.63
NIPBL-208ENST00000514335 ASB16-AS1Q495Z4 193 aa4.85□□□□□ -1.63
NIPBL-208ENST00000514335 BPY2O14599 106 aa4.85□□□□□ -1.63
NIPBL-208ENST00000514335 PRR4Q16378 134 aa4.85□□□□□ -1.63
NIPBL-208ENST00000514335 IGKV1D-42A0A075B6H8 117 aa4.84□□□□□ -1.63
NIPBL-208ENST00000514335 F8W735 103 aaPredicted RBP4.84□□□□□ -1.63
NIPBL-208ENST00000514335 SPTBN1Q01082 2364 aaKnown RBP4.84□□□□□ -1.63
NIPBL-208ENST00000514335 A0A0J9YX75 114 aa4.84□□□□□ -1.63
NIPBL-208ENST00000514335 IGHV3-30-3P0DP02 117 aa4.84□□□□□ -1.63
NIPBL-208ENST00000514335 FREM2Q5SZK8 3169 aa4.84□□□□□ -1.63
NIPBL-208ENST00000514335 LRRK2Q5S007 2527 aa4.84□□□□□ -1.63
NIPBL-208ENST00000514335 IGLV1-47P01700 117 aa4.83□□□□□ -1.64
NIPBL-208ENST00000514335 PATE4P0C8F1 98 aa4.83□□□□□ -1.64
NIPBL-208ENST00000514335 CRIP1P50238 77 aa4.83□□□□□ -1.64
NIPBL-208ENST00000514335 MIAQ16674 131 aa4.83□□□□□ -1.64
NIPBL-208ENST00000514335 C8orf17Q9NRJ1 99 aa4.83□□□□□ -1.64
NIPBL-208ENST00000514335 IGHV3-64A0A075B6Q5 118 aa4.83□□□□□ -1.64
NIPBL-208ENST00000514335 IGKV1OR2-108A0A075B7D4 117 aa4.83□□□□□ -1.64
NIPBL-208ENST00000514335 A0A1W2PNM2 257 aa4.83□□□□□ -1.64
NIPBL-208ENST00000514335 MIR7-3HGQ8N6C7 128 aa4.83□□□□□ -1.64
NIPBL-208ENST00000514335 SEC16AO15027 2179 aa4.83□□□□□ -1.64
NIPBL-208ENST00000514335 CR1P17927 2039 aa4.83□□□□□ -1.64
NIPBL-208ENST00000514335 USF3Q68DE3 2245 aa4.83□□□□□ -1.64
NIPBL-208ENST00000514335 RTL8CO15255 209 aa4.83□□□□□ -1.64
NIPBL-208ENST00000514335 IGHV1-69P01742 117 aa4.83□□□□□ -1.64
NIPBL-208ENST00000514335 MIR22HGQ0VDD5 57 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms