RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 OSTCQ9NRP0 149 aa4.47□□□□□ -1.69
USP46-208ENST00000512656 CSDC2Q9Y534 153 aaKnown RBP4.47□□□□□ -1.69
USP46-208ENST00000512656 LRP2P98164 4655 aa4.47□□□□□ -1.69
USP46-208ENST00000512656 IGLV4-69A0A075B6H9 119 aa4.46□□□□□ -1.7
USP46-208ENST00000512656 ZNF727A8MUV8 499 aa4.46□□□□□ -1.7
USP46-208ENST00000512656 PPP1R2P9O14990 202 aa4.46□□□□□ -1.7
USP46-208ENST00000512656 TCAPO15273 167 aa4.46□□□□□ -1.7
USP46-208ENST00000512656 APOMO95445 188 aa4.46□□□□□ -1.7
USP46-208ENST00000512656 SUMO2P61956 95 aaKnown RBP4.46□□□□□ -1.7
USP46-208ENST00000512656 LINC01551Q86U37 167 aa4.46□□□□□ -1.7
USP46-208ENST00000512656 AKAP14Q86UN6 197 aa4.46□□□□□ -1.7
USP46-208ENST00000512656 C2orf48Q96LS8 159 aa4.46□□□□□ -1.7
USP46-208ENST00000512656 CAMK2N2Q96S95 79 aa4.46□□□□□ -1.7
USP46-208ENST00000512656 GAS8-AS1O95177 125 aa4.45□□□□□ -1.7
USP46-208ENST00000512656 KRTAP10-8P60410 259 aa4.45□□□□□ -1.7
USP46-208ENST00000512656 GAGE2BQ13066 116 aa4.45□□□□□ -1.7
USP46-208ENST00000512656 SRSF9Q13242 221 aaKnown RBP eCLIP4.45□□□□□ -1.7
USP46-208ENST00000512656 AMN1Q8IY45 258 aa4.45□□□□□ -1.7
USP46-208ENST00000512656 TIMM21Q9BVV7 248 aa4.45□□□□□ -1.7
USP46-208ENST00000512656 RNF213Q63HN8 5207 aa4.45□□□□□ -1.7
USP46-208ENST00000512656 TRAV13-1A0A0B4J241 112 aa4.44□□□□□ -1.7
USP46-208ENST00000512656 A0A1B0GW15 77 aa4.44□□□□□ -1.7
USP46-208ENST00000512656 LINC00862A6NCI5 91 aa4.44□□□□□ -1.7
USP46-208ENST00000512656 F8WDY8 70 aa4.44□□□□□ -1.7
USP46-208ENST00000512656 SMKR1H3BMG3 65 aa4.44□□□□□ -1.7
USP46-208ENST00000512656 MT-ND6P03923 174 aa4.44□□□□□ -1.7
USP46-208ENST00000512656 TMEM241Q24JQ0 296 aa4.44□□□□□ -1.7
USP46-208ENST00000512656 FAM74A3Q4VXF1 159 aa4.44□□□□□ -1.7
USP46-208ENST00000512656 C10orf25Q5T742 122 aa4.44□□□□□ -1.7
USP46-208ENST00000512656 NUP35Q8NFH5 326 aa4.44□□□□□ -1.7
USP46-208ENST00000512656 C20orf78Q9BR46 151 aa4.44□□□□□ -1.7
USP46-208ENST00000512656 NAT8BQ9UHF3 227 aa4.44□□□□□ -1.7
USP46-208ENST00000512656 UBE2D4Q9Y2X8 147 aa4.44□□□□□ -1.7
USP46-208ENST00000512656 SRP19P09132 144 aaKnown RBP4.43□□□□□ -1.7
USP46-208ENST00000512656 CKS2P33552 79 aa4.43□□□□□ -1.7
USP46-208ENST00000512656 RPL32P62910 135 aaKnown RBP4.43□□□□□ -1.7
USP46-208ENST00000512656 RPL18AQ02543 176 aaKnown RBP4.43□□□□□ -1.7
USP46-208ENST00000512656 SPAG11BQ08648 103 aa4.43□□□□□ -1.7
USP46-208ENST00000512656 FAM104BQ5XKR9 115 aa4.43□□□□□ -1.7
USP46-208ENST00000512656 C5orf38Q86SI9 138 aa4.43□□□□□ -1.7
USP46-208ENST00000512656 NRACQ8N912 160 aa4.43□□□□□ -1.7
USP46-208ENST00000512656 OR10D4PQ8NGN7 298 aa4.43□□□□□ -1.7
USP46-208ENST00000512656 IMMP2LQ96T52 175 aa4.43□□□□□ -1.7
USP46-208ENST00000512656 V9GYV3 84 aa4.43□□□□□ -1.7
USP46-208ENST00000512656 A0A1W2PNN7 141 aa4.42□□□□□ -1.7
USP46-208ENST00000512656 S100A8P05109 93 aa4.42□□□□□ -1.7
USP46-208ENST00000512656 MRPL51Q4U2R6 128 aaKnown RBP4.42□□□□□ -1.7
USP46-208ENST00000512656 C9orf116Q5BN46 136 aaPredicted RBP4.42□□□□□ -1.7
USP46-208ENST00000512656 RNASE13Q5GAN3 156 aaKnown RBP4.42□□□□□ -1.7
USP46-208ENST00000512656 Q6ZUT4 128 aa4.42□□□□□ -1.7
USP46-208ENST00000512656 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
USP46-208ENST00000512656 SPANXA1Q9NS26 97 aa4.42□□□□□ -1.7
USP46-208ENST00000512656 PSORS1C2Q9UIG4 136 aa4.42□□□□□ -1.7
USP46-208ENST00000512656 TRBV24-1A0A075B6N3 115 aa4.41□□□□□ -1.7
USP46-208ENST00000512656 SMIM27A0A1W2PRY6 76 aa4.41□□□□□ -1.7
USP46-208ENST00000512656 F8W036 122 aa4.41□□□□□ -1.7
USP46-208ENST00000512656 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.41□□□□□ -1.7
USP46-208ENST00000512656 NDUFA1O15239 70 aa4.41□□□□□ -1.7
USP46-208ENST00000512656 MRPS36P82909 103 aaKnown RBP4.41□□□□□ -1.7
USP46-208ENST00000512656 ADIRFQ15847 76 aa4.41□□□□□ -1.7
USP46-208ENST00000512656 C1orf137Q5JT78 98 aa4.41□□□□□ -1.7
USP46-208ENST00000512656 ORAOV1Q8WV07 137 aa4.41□□□□□ -1.7
USP46-208ENST00000512656 DIRC1Q969H9 104 aa4.41□□□□□ -1.7
USP46-208ENST00000512656 MRPL35Q9NZE8 188 aaKnown RBP4.41□□□□□ -1.7
USP46-208ENST00000512656 NAT8Q9UHE5 227 aa4.41□□□□□ -1.7
USP46-208ENST00000512656 TGIF2-C20orf24A0A0A6YYL0 155 aa4.4□□□□□ -1.71
USP46-208ENST00000512656 IFITM10A6NMD0 228 aa4.4□□□□□ -1.71
USP46-208ENST00000512656 TNFRSF6BO95407 300 aa4.4□□□□□ -1.71
USP46-208ENST00000512656 PPBPP02775 128 aa4.4□□□□□ -1.71
USP46-208ENST00000512656 RPL23P62829 140 aaKnown RBP4.4□□□□□ -1.71
USP46-208ENST00000512656 HBBP68871 147 aa4.4□□□□□ -1.71
USP46-208ENST00000512656 OPRPNQ99935 248 aaPredicted RBP4.4□□□□□ -1.71
USP46-208ENST00000512656 SMIM2Q9BVW6 85 aa4.4□□□□□ -1.71
USP46-208ENST00000512656 hCG_2014768A0A024R1R8 64 aa4.39□□□□□ -1.71
USP46-208ENST00000512656 A0A087WZ39 114 aa4.39□□□□□ -1.71
USP46-208ENST00000512656 IGHV3OR16-9A0A0B4J2B5 98 aa4.39□□□□□ -1.71
USP46-208ENST00000512656 RAB5AP20339 215 aa4.39□□□□□ -1.71
USP46-208ENST00000512656 RPL39P62891 51 aaKnown RBP4.39□□□□□ -1.71
USP46-208ENST00000512656 PEA15Q15121 130 aa4.39□□□□□ -1.71
USP46-208ENST00000512656 PHF5AQ7RTV0 110 aaKnown RBP4.39□□□□□ -1.71
USP46-208ENST00000512656 SMDT1Q9H4I9 107 aa4.39□□□□□ -1.71
USP46-208ENST00000512656 IGKV2D-30A0A075B6S6 120 aa4.38□□□□□ -1.71
USP46-208ENST00000512656 D6R8Y8 96 aa4.38□□□□□ -1.71
USP46-208ENST00000512656 IGLV7-43P04211 117 aa4.38□□□□□ -1.71
USP46-208ENST00000512656 TLX1NBP0CAT3 122 aa4.38□□□□□ -1.71
USP46-208ENST00000512656 IFI27P40305 119 aaPredicted RBP4.38□□□□□ -1.71
USP46-208ENST00000512656 MPLKIPQ8TAP9 179 aa4.38□□□□□ -1.71
USP46-208ENST00000512656 NPYP01303 97 aa4.37□□□□□ -1.71
USP46-208ENST00000512656 MRPL54Q6P161 138 aaKnown RBP4.37□□□□□ -1.71
USP46-208ENST00000512656 UNQ6190/PRO20217Q6UXQ8 127 aa4.37□□□□□ -1.71
USP46-208ENST00000512656 ORMDL3Q8N138 153 aa4.37□□□□□ -1.71
USP46-208ENST00000512656 PACRGQ96M98 296 aaPredicted RBP4.37□□□□□ -1.71
USP46-208ENST00000512656 PYGO1Q9Y3Y4 419 aa4.37□□□□□ -1.71
USP46-208ENST00000512656 IGLV1-50A0A075B6I6 118 aa4.36□□□□□ -1.71
USP46-208ENST00000512656 TRBV30A0A0K0K1B3 111 aa4.36□□□□□ -1.71
USP46-208ENST00000512656 A0A1B0GXF2 115 aa4.36□□□□□ -1.71
USP46-208ENST00000512656 H0Y9J4 135 aa4.36□□□□□ -1.71
USP46-208ENST00000512656 KRTAP10-6P60371 365 aaPredicted RBP4.36□□□□□ -1.71
USP46-208ENST00000512656 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
USP46-208ENST00000512656 UBE2BP63146 152 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms