RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 SPATA25Q9BR10 227 aa9.5□□□□□ -0.89
PCDHA4-202ENST00000512229 USP24Q9UPU5 2620 aa9.5□□□□□ -0.89
PCDHA4-202ENST00000512229 A0A096LNJ9 63 aa9.49□□□□□ -0.89
PCDHA4-202ENST00000512229 UBE2D3P61077 147 aa9.49□□□□□ -0.89
PCDHA4-202ENST00000512229 UBE2D2P62837 147 aa9.49□□□□□ -0.89
PCDHA4-202ENST00000512229 ANAPC13Q9BS18 74 aa9.49□□□□□ -0.89
PCDHA4-202ENST00000512229 HIST1H4AP62805 103 aaKnown RBP9.49□□□□□ -0.89
PCDHA4-202ENST00000512229 KLK9Q2XQG4 91 aa9.49□□□□□ -0.89
PCDHA4-202ENST00000512229 C2orf91Q6ZV80 131 aa9.49□□□□□ -0.89
PCDHA4-202ENST00000512229 ATRQ13535 2644 aa9.48□□□□□ -0.89
PCDHA4-202ENST00000512229 FSHBP01225 129 aa9.48□□□□□ -0.89
PCDHA4-202ENST00000512229 MRPS36P82909 103 aaKnown RBP9.48□□□□□ -0.89
PCDHA4-202ENST00000512229 RPL18AQ02543 176 aaKnown RBP9.48□□□□□ -0.89
PCDHA4-202ENST00000512229 RNASE8Q8TDE3 154 aaKnown RBP9.48□□□□□ -0.89
PCDHA4-202ENST00000512229 ASPMQ8IZT6 3477 aa9.47□□□□□ -0.89
PCDHA4-202ENST00000512229 SPANXB1Q9NS25 103 aaPredicted RBP9.47□□□□□ -0.89
PCDHA4-202ENST00000512229 IGLV2-18A0A075B6J9 118 aa9.46□□□□□ -0.89
PCDHA4-202ENST00000512229 A8MZ25 164 aa9.46□□□□□ -0.89
PCDHA4-202ENST00000512229 MUC4Q99102 2169 aa9.46□□□□□ -0.89
PCDHA4-202ENST00000512229 BEAN1Q3B7T3 259 aa9.46□□□□□ -0.89
PCDHA4-202ENST00000512229 TMEM126AQ9H061 195 aa9.46□□□□□ -0.89
PCDHA4-202ENST00000512229 SPANXCQ9NY87 97 aa9.46□□□□□ -0.89
PCDHA4-202ENST00000512229 ORMDL1Q9P0S3 153 aa9.46□□□□□ -0.89
PCDHA4-202ENST00000512229 TEN1Q86WV5 123 aa9.46□□□□□ -0.9
PCDHA4-202ENST00000512229 A0A0B4J2C4 111 aa9.45□□□□□ -0.9
PCDHA4-202ENST00000512229 CLUHP3Q96NS8 147 aa9.45□□□□□ -0.9
PCDHA4-202ENST00000512229 DMDP11532 3685 aa9.44□□□□□ -0.9
PCDHA4-202ENST00000512229 KPRPQ5T749 579 aaPredicted RBP9.44□□□□□ -0.9
PCDHA4-202ENST00000512229 CDC42SE2Q9NRR3 84 aa9.44□□□□□ -0.9
PCDHA4-202ENST00000512229 KLK5Q9Y337 293 aaPredicted RBP9.44□□□□□ -0.9
PCDHA4-202ENST00000512229 KIF25-AS1Q9Y6Z4 181 aa9.44□□□□□ -0.9
PCDHA4-202ENST00000512229 UBE2D1P51668 147 aa9.44□□□□□ -0.9
PCDHA4-202ENST00000512229 HIGD2BQ4VC39 106 aa9.44□□□□□ -0.9
PCDHA4-202ENST00000512229 UBE2BP63146 152 aa9.44□□□□□ -0.9
PCDHA4-202ENST00000512229 DSCR8Q96T75 97 aa9.44□□□□□ -0.9
PCDHA4-202ENST00000512229 MGAM2Q2M2H8 2515 aa9.43□□□□□ -0.9
PCDHA4-202ENST00000512229 IBA57-AS1B1ANH7 110 aa9.43□□□□□ -0.9
PCDHA4-202ENST00000512229 LINC00308Q8TCZ7 52 aa9.43□□□□□ -0.9
PCDHA4-202ENST00000512229 CLEC2BQ92478 149 aa9.43□□□□□ -0.9
PCDHA4-202ENST00000512229 UBL5Q9BZL1 73 aa9.43□□□□□ -0.9
PCDHA4-202ENST00000512229 FAM19A4Q96LR4 140 aa9.43□□□□□ -0.9
PCDHA4-202ENST00000512229 LELP1Q5T871 98 aa9.42□□□□□ -0.9
PCDHA4-202ENST00000512229 UFSP1Q6NVU6 142 aa9.42□□□□□ -0.9
PCDHA4-202ENST00000512229 DCHS1Q96JQ0 3298 aa9.42□□□□□ -0.9
PCDHA4-202ENST00000512229 LECT2O14960 151 aa9.42□□□□□ -0.9
PCDHA4-202ENST00000512229 FHL3Q13643 280 aa9.42□□□□□ -0.9
PCDHA4-202ENST00000512229 LINC00959A0A1B0GUT2 108 aa9.42□□□□□ -0.9
PCDHA4-202ENST00000512229 ETDCA0A1B0GVM5 59 aa9.42□□□□□ -0.9
PCDHA4-202ENST00000512229 NCR3O14931 201 aa9.42□□□□□ -0.9
PCDHA4-202ENST00000512229 CD164L2Q6UWJ8 174 aa9.42□□□□□ -0.9
PCDHA4-202ENST00000512229 PRB2P02812 416 aaPredicted RBP9.41□□□□□ -0.9
PCDHA4-202ENST00000512229 TRBV10-2A0A0K0K1G8 114 aa9.41□□□□□ -0.9
PCDHA4-202ENST00000512229 LINC00242Q5T6M2 205 aa9.41□□□□□ -0.9
PCDHA4-202ENST00000512229 Q6ZSN1 163 aa9.41□□□□□ -0.9
PCDHA4-202ENST00000512229 TRAV10A0A0B4J240 114 aa9.41□□□□□ -0.9
PCDHA4-202ENST00000512229 PTH2Q96A98 100 aa9.41□□□□□ -0.9
PCDHA4-202ENST00000512229 H3BT86 120 aa9.4□□□□□ -0.9
PCDHA4-202ENST00000512229 TCL1BO95988 128 aa9.4□□□□□ -0.9
PCDHA4-202ENST00000512229 RBMY1FQ15415 496 aaKnown RBP9.4□□□□□ -0.9
PCDHA4-202ENST00000512229 CHCHD7Q9BUK0 85 aa9.4□□□□□ -0.9
PCDHA4-202ENST00000512229 HAMPP81172 84 aa9.4□□□□□ -0.9
PCDHA4-202ENST00000512229 A0A096LNT2 108 aa9.4□□□□□ -0.91
PCDHA4-202ENST00000512229 FHL2Q14192 279 aa9.4□□□□□ -0.91
PCDHA4-202ENST00000512229 C15orf53Q8NAA6 179 aa9.39□□□□□ -0.91
PCDHA4-202ENST00000512229 TIMM17BO60830 172 aa9.39□□□□□ -0.91
PCDHA4-202ENST00000512229 IL17DQ8TAD2 202 aa9.39□□□□□ -0.91
PCDHA4-202ENST00000512229 LINC00315P59091 139 aa9.38□□□□□ -0.91
PCDHA4-202ENST00000512229 PKIGQ9Y2B9 76 aa9.38□□□□□ -0.91
PCDHA4-202ENST00000512229 IGLV4-69A0A075B6H9 119 aa9.38□□□□□ -0.91
PCDHA4-202ENST00000512229 LINC00694P0DN24 101 aa9.38□□□□□ -0.91
PCDHA4-202ENST00000512229 C11orf72Q8NBR9 251 aa9.38□□□□□ -0.91
PCDHA4-202ENST00000512229 DEFB105AQ8NG35 78 aa9.38□□□□□ -0.91
PCDHA4-202ENST00000512229 FOXI1Q12951 378 aa9.37□□□□□ -0.91
PCDHA4-202ENST00000512229 DIRC1Q969H9 104 aa9.37□□□□□ -0.91
PCDHA4-202ENST00000512229 KALRNO60229 2985 aa9.37□□□□□ -0.91
PCDHA4-202ENST00000512229 CSDC2Q9Y534 153 aaKnown RBP9.37□□□□□ -0.91
PCDHA4-202ENST00000512229 POM121L12Q8N7R1 296 aa9.36□□□□□ -0.91
PCDHA4-202ENST00000512229 AMELXQ99217 191 aa9.36□□□□□ -0.91
PCDHA4-202ENST00000512229 MAST4O15021 2626 aa9.36□□□□□ -0.91
PCDHA4-202ENST00000512229 LAMA5O15230 3695 aa9.36□□□□□ -0.91
PCDHA4-202ENST00000512229 A0A0J9YWU9 116 aa9.36□□□□□ -0.91
PCDHA4-202ENST00000512229 NANOS2P60321 138 aaKnown RBP9.35□□□□□ -0.91
PCDHA4-202ENST00000512229 ACYP1P07311 99 aa9.35□□□□□ -0.91
PCDHA4-202ENST00000512229 RNF183Q96D59 192 aa9.35□□□□□ -0.91
PCDHA4-202ENST00000512229 XAGE1AQ9HD64 81 aa9.35□□□□□ -0.91
PCDHA4-202ENST00000512229 RETNQ9HD89 108 aa9.35□□□□□ -0.91
PCDHA4-202ENST00000512229 SPANXDQ9BXN6 97 aa9.35□□□□□ -0.91
PCDHA4-202ENST00000512229 IGSF10Q6WRI0 2623 aa9.34□□□□□ -0.91
PCDHA4-202ENST00000512229 FLNCQ14315 2725 aa9.34□□□□□ -0.91
PCDHA4-202ENST00000512229 IGLV4-60A0A075B6I1 120 aa9.34□□□□□ -0.91
PCDHA4-202ENST00000512229 LINC00526Q96FQ7 95 aa9.34□□□□□ -0.91
PCDHA4-202ENST00000512229 TRIAP1O43715 76 aa9.34□□□□□ -0.91
PCDHA4-202ENST00000512229 TRBV30A0A0K0K1B3 111 aa9.33□□□□□ -0.92
PCDHA4-202ENST00000512229 SMIM1B2RUZ4 78 aa9.33□□□□□ -0.92
PCDHA4-202ENST00000512229 JMJD7-PLA2G4BH0Y9G9 81 aa9.32□□□□□ -0.92
PCDHA4-202ENST00000512229 SYCNQ0VAF6 134 aa9.32□□□□□ -0.92
PCDHA4-202ENST00000512229 TACC2O95359 2948 aa9.32□□□□□ -0.92
PCDHA4-202ENST00000512229 TSPEAR-AS2P59090 65 aa9.31□□□□□ -0.92
PCDHA4-202ENST00000512229 IGKV2-24A0A0C4DH68 120 aa9.31□□□□□ -0.92
PCDHA4-202ENST00000512229 Q6ZTC4 211 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms