RNA–Protein interactions for RNA: ENST00000511871.1

SIM1-204, Transcript of SIM bHLH transcription factor 1, humanhuman

TSL 1 (best)

Gene SIM1, Length 1,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-204ENST00000511871 SMAGPQ0VAQ4 97 aa10.51□□□□□ -0.73
SIM1-204ENST00000511871 DGAT2L7PQ6IED9 249 aa10.5□□□□□ -0.73
SIM1-204ENST00000511871 TIMM21Q9BVV7 248 aa10.5□□□□□ -0.73
SIM1-204ENST00000511871 MAP1LC3AQ9H492 121 aa10.5□□□□□ -0.73
SIM1-204ENST00000511871 UQCR10Q9UDW1 63 aa10.5□□□□□ -0.73
SIM1-204ENST00000511871 LOC389332A0A1B0GUA5 103 aa10.49□□□□□ -0.73
SIM1-204ENST00000511871 GAGE12HA6NDE8 117 aa10.49□□□□□ -0.73
SIM1-204ENST00000511871 PRSS1P07477 247 aa10.49□□□□□ -0.73
SIM1-204ENST00000511871 SPATA45Q537H7 98 aa10.49□□□□□ -0.73
SIM1-204ENST00000511871 CHCHD10Q8WYQ3 142 aaPredicted RBP10.49□□□□□ -0.73
SIM1-204ENST00000511871 URB1-AS1Q96HZ7 61 aa10.49□□□□□ -0.73
SIM1-204ENST00000511871 HSPG2P98160 4391 aa10.49□□□□□ -0.73
SIM1-204ENST00000511871 LINC00959A0A1B0GUT2 108 aa10.48□□□□□ -0.73
SIM1-204ENST00000511871 RPL39P62891 51 aaKnown RBP10.48□□□□□ -0.73
SIM1-204ENST00000511871 LINC00614P0C842 121 aa10.47□□□□□ -0.73
SIM1-204ENST00000511871 IGLC3P0DOY3 106 aa10.47□□□□□ -0.73
SIM1-204ENST00000511871 XGP55808 180 aa10.47□□□□□ -0.73
SIM1-204ENST00000511871 Q8N8P6 123 aa10.47□□□□□ -0.73
SIM1-204ENST00000511871 KRTAP17-1Q9BYP8 105 aa10.47□□□□□ -0.73
SIM1-204ENST00000511871 Q6ZUT4 128 aa10.46□□□□□ -0.74
SIM1-204ENST00000511871 CCL25O15444 150 aa10.45□□□□□ -0.74
SIM1-204ENST00000511871 FOXI1Q12951 378 aa10.45□□□□□ -0.74
SIM1-204ENST00000511871 SS18Q15532 418 aa10.45□□□□□ -0.74
SIM1-204ENST00000511871 LINC01620Q4KN68 170 aa10.45□□□□□ -0.74
SIM1-204ENST00000511871 RNASE13Q5GAN3 156 aaKnown RBP10.45□□□□□ -0.74
SIM1-204ENST00000511871 FAM104AQ969W3 186 aa10.45□□□□□ -0.74
SIM1-204ENST00000511871 SPANXA1Q9NS26 97 aa10.45□□□□□ -0.74
SIM1-204ENST00000511871 XCL1P47992 114 aa10.44□□□□□ -0.74
SIM1-204ENST00000511871 C15orf56Q8N910 161 aa10.44□□□□□ -0.74
SIM1-204ENST00000511871 FAM30AQ9NZY2 134 aa10.44□□□□□ -0.74
SIM1-204ENST00000511871 DNAH8Q96JB1 4490 aa10.43□□□□□ -0.74
SIM1-204ENST00000511871 SYS1-DBNDD2H3BUS1 97 aa10.43□□□□□ -0.74
SIM1-204ENST00000511871 LEPROTL1O95214 131 aa10.43□□□□□ -0.74
SIM1-204ENST00000511871 MRPS36P82909 103 aaKnown RBP10.43□□□□□ -0.74
SIM1-204ENST00000511871 CFAP161Q6P656 301 aa10.43□□□□□ -0.74
SIM1-204ENST00000511871 PET117Q6UWS5 81 aa10.43□□□□□ -0.74
SIM1-204ENST00000511871 Q6ZSA8 131 aa10.43□□□□□ -0.74
SIM1-204ENST00000511871 NXT2Q9NPJ8 142 aaKnown RBP10.43□□□□□ -0.74
SIM1-204ENST00000511871 HSPB8Q9UJY1 196 aa10.43□□□□□ -0.74
SIM1-204ENST00000511871 hDV102S1A0JD36 115 aa10.42□□□□□ -0.74
SIM1-204ENST00000511871 K7EMI3 77 aa10.42□□□□□ -0.74
SIM1-204ENST00000511871 IFI27P40305 119 aaPredicted RBP10.42□□□□□ -0.74
SIM1-204ENST00000511871 COL5A1-AS1Q5SY13 56 aa10.42□□□□□ -0.74
SIM1-204ENST00000511871 CD164L2Q6UWJ8 174 aa10.42□□□□□ -0.74
SIM1-204ENST00000511871 OPRPNQ99935 248 aaPredicted RBP10.42□□□□□ -0.74
SIM1-204ENST00000511871 PYGO1Q9Y3Y4 419 aa10.41□□□□□ -0.74
SIM1-204ENST00000511871 HNRNPA3P51991 378 aaKnown RBP10.4□□□□□ -0.74
SIM1-204ENST00000511871 CNBPP62633 177 aaKnown RBP10.4□□□□□ -0.74
SIM1-204ENST00000511871 ORMDL2Q53FV1 153 aa10.4□□□□□ -0.74
SIM1-204ENST00000511871 Q6ZN92 141 aa10.4□□□□□ -0.74
SIM1-204ENST00000511871 Q8N1X5 172 aa10.4□□□□□ -0.74
SIM1-204ENST00000511871 C9orf163Q8N9P6 203 aa10.4□□□□□ -0.74
SIM1-204ENST00000511871 MAP1LC3CQ9BXW4 147 aa10.4□□□□□ -0.74
SIM1-204ENST00000511871 TRAV13-1A0A0B4J241 112 aa10.4□□□□□ -0.75
SIM1-204ENST00000511871 SLPIP03973 132 aa10.4□□□□□ -0.75
SIM1-204ENST00000511871 HAMPP81172 84 aa10.4□□□□□ -0.75
SIM1-204ENST00000511871 AP5S1Q9NUS5 200 aa10.4□□□□□ -0.75
SIM1-204ENST00000511871 CYSLTR1Q9Y271 337 aa10.4□□□□□ -0.75
SIM1-204ENST00000511871 C2orf66Q6UXQ4 117 aa10.39□□□□□ -0.75
SIM1-204ENST00000511871 KRTAP4-5Q9BYR2 181 aa10.39□□□□□ -0.75
SIM1-204ENST00000511871 IGLV4-3A0A075B6K6 122 aa10.38□□□□□ -0.75
SIM1-204ENST00000511871 GVQW2A0A096LPI5 108 aaPredicted RBP10.38□□□□□ -0.75
SIM1-204ENST00000511871 HIGD2BQ4VC39 106 aa10.38□□□□□ -0.75
SIM1-204ENST00000511871 IGHV1-58A0A0C4DH39 117 aa10.37□□□□□ -0.75
SIM1-204ENST00000511871 FA2HQ7L5A8 372 aa10.37□□□□□ -0.75
SIM1-204ENST00000511871 ATOH7Q8N100 152 aa10.37□□□□□ -0.75
SIM1-204ENST00000511871 PRSS3P2Q8NHM4 247 aa10.37□□□□□ -0.75
SIM1-204ENST00000511871 MAJINQ3KP22 176 aa10.36□□□□□ -0.75
SIM1-204ENST00000511871 LINC01545Q5VT33 79 aa10.36□□□□□ -0.75
SIM1-204ENST00000511871 TMEM141Q96I45 108 aa10.36□□□□□ -0.75
SIM1-204ENST00000511871 LINC01546A6NGU7 62 aa10.36□□□□□ -0.75
SIM1-204ENST00000511871 LINC00173Q6ZV60 143 aa10.36□□□□□ -0.75
SIM1-204ENST00000511871 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.35□□□□□ -0.75
SIM1-204ENST00000511871 IGIPA6NJ69 53 aa10.35□□□□□ -0.75
SIM1-204ENST00000511871 HSBP1L1C9JCN9 74 aa10.35□□□□□ -0.75
SIM1-204ENST00000511871 COX7A2LO14548 114 aa10.35□□□□□ -0.75
SIM1-204ENST00000511871 DLEU1O43261 78 aa10.35□□□□□ -0.75
SIM1-204ENST00000511871 G0S2P27469 103 aa10.35□□□□□ -0.75
SIM1-204ENST00000511871 SDIM1Q6ZPB5 146 aa10.35□□□□□ -0.75
SIM1-204ENST00000511871 NPSP0C0P6 89 aa10.34□□□□□ -0.75
SIM1-204ENST00000511871 SMR3BP02814 79 aaPredicted RBP10.33□□□□□ -0.76
SIM1-204ENST00000511871 C5orf38Q86SI9 138 aa10.33□□□□□ -0.76
SIM1-204ENST00000511871 TOMM6Q96B49 74 aa10.33□□□□□ -0.76
SIM1-204ENST00000511871 CHAC1Q9BUX1 264 aa10.33□□□□□ -0.76
SIM1-204ENST00000511871 IGHV3-64A0A075B6Q5 118 aa10.33□□□□□ -0.76
SIM1-204ENST00000511871 IGHV3OR16-9A0A0B4J2B5 98 aa10.33□□□□□ -0.76
SIM1-204ENST00000511871 MALP21145 153 aa10.33□□□□□ -0.76
SIM1-204ENST00000511871 BATFQ16520 125 aa10.33□□□□□ -0.76
SIM1-204ENST00000511871 SCXQ7RTU7 201 aa10.33□□□□□ -0.76
SIM1-204ENST00000511871 LINC00526Q96FQ7 95 aa10.33□□□□□ -0.76
SIM1-204ENST00000511871 AMELXQ99217 191 aa10.33□□□□□ -0.76
SIM1-204ENST00000511871 ZC2HC1BQ5TFG8 222 aa10.32□□□□□ -0.76
SIM1-204ENST00000511871 STPG4Q8N801 248 aa10.32□□□□□ -0.76
SIM1-204ENST00000511871 PMCHL2Q9BQD1 86 aa10.32□□□□□ -0.76
SIM1-204ENST00000511871 A0A096LNJ9 63 aa10.31□□□□□ -0.76
SIM1-204ENST00000511871 LINC00242Q5T6M2 205 aa10.31□□□□□ -0.76
SIM1-204ENST00000511871 SLC25A34Q6PIV7 304 aa10.31□□□□□ -0.76
SIM1-204ENST00000511871 TIMM17AQ99595 171 aa10.31□□□□□ -0.76
SIM1-204ENST00000511871 VCX2Q9H322 139 aa10.31□□□□□ -0.76
SIM1-204ENST00000511871 EPM2AB3EWF7 344 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms