RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 SPINK8P0C7L1 97 aa6.73□□□□□ -1.33
POLR2J3-215ENST00000511313 ATXN8Q156A1 80 aa6.73□□□□□ -1.33
POLR2J3-215ENST00000511313 MPV17L2Q567V2 206 aa6.73□□□□□ -1.33
POLR2J3-215ENST00000511313 Q6ZUT4 128 aa6.73□□□□□ -1.33
POLR2J3-215ENST00000511313 SPANXDQ9BXN6 97 aa6.73□□□□□ -1.33
POLR2J3-215ENST00000511313 MRPL35Q9NZE8 188 aaKnown RBP6.73□□□□□ -1.33
POLR2J3-215ENST00000511313 A0A1B0GXF2 115 aa6.72□□□□□ -1.33
POLR2J3-215ENST00000511313 BATFQ16520 125 aa6.72□□□□□ -1.33
POLR2J3-215ENST00000511313 SPANXB1Q9NS25 103 aaPredicted RBP6.72□□□□□ -1.33
POLR2J3-215ENST00000511313 KIF25-AS1Q9Y6Z4 181 aa6.72□□□□□ -1.33
POLR2J3-215ENST00000511313 ITPR3Q14573 2671 aa6.72□□□□□ -1.33
POLR2J3-215ENST00000511313 SPATA45Q537H7 98 aa6.72□□□□□ -1.33
POLR2J3-215ENST00000511313 IGLV2-8P01709 118 aa6.71□□□□□ -1.33
POLR2J3-215ENST00000511313 PRB4P10163 310 aaPredicted RBP6.71□□□□□ -1.33
POLR2J3-215ENST00000511313 HSD52Q0P140 79 aa6.71□□□□□ -1.33
POLR2J3-215ENST00000511313 FAM19A2Q8N3H0 131 aa6.71□□□□□ -1.33
POLR2J3-215ENST00000511313 ZFHX4Q86UP3 3567 aa6.71□□□□□ -1.34
POLR2J3-215ENST00000511313 INAFM2P0DMQ5 153 aa6.71□□□□□ -1.34
POLR2J3-215ENST00000511313 PAM16Q9Y3D7 125 aa6.71□□□□□ -1.34
POLR2J3-215ENST00000511313 A0A1B0GWB2 263 aa6.7□□□□□ -1.34
POLR2J3-215ENST00000511313 TSHBP01222 138 aa6.7□□□□□ -1.34
POLR2J3-215ENST00000511313 Q6ZSN1 163 aa6.7□□□□□ -1.34
POLR2J3-215ENST00000511313 FAM19A1Q7Z5A9 133 aa6.7□□□□□ -1.34
POLR2J3-215ENST00000511313 A0A0J9YXV3 536 aa6.7□□□□□ -1.34
POLR2J3-215ENST00000511313 EPM2AB3EWF7 344 aa6.7□□□□□ -1.34
POLR2J3-215ENST00000511313 FLNAP21333 2647 aaKnown RBP6.7□□□□□ -1.34
POLR2J3-215ENST00000511313 RPL37AP61513 92 aaKnown RBP6.7□□□□□ -1.34
POLR2J3-215ENST00000511313 UBE2D4Q9Y2X8 147 aa6.7□□□□□ -1.34
POLR2J3-215ENST00000511313 TCL1BO95988 128 aa6.7□□□□□ -1.34
POLR2J3-215ENST00000511313 TIMM17BO60830 172 aa6.69□□□□□ -1.34
POLR2J3-215ENST00000511313 CRIP1P50238 77 aa6.69□□□□□ -1.34
POLR2J3-215ENST00000511313 IGLV4-3A0A075B6K6 122 aa6.69□□□□□ -1.34
POLR2J3-215ENST00000511313 LOC100131303A0A0U1RQF7 123 aa6.69□□□□□ -1.34
POLR2J3-215ENST00000511313 LIMD2Q9BT23 127 aa6.69□□□□□ -1.34
POLR2J3-215ENST00000511313 CHD6Q8TD26 2715 aa6.69□□□□□ -1.34
POLR2J3-215ENST00000511313 PLAC8L1A1L4L8 177 aa6.69□□□□□ -1.34
POLR2J3-215ENST00000511313 FABP2P12104 132 aa6.69□□□□□ -1.34
POLR2J3-215ENST00000511313 SND1-IT1Q9HBX3 110 aa6.69□□□□□ -1.34
POLR2J3-215ENST00000511313 NDUFB1O75438 58 aa6.69□□□□□ -1.34
POLR2J3-215ENST00000511313 COX7BP24311 80 aa6.69□□□□□ -1.34
POLR2J3-215ENST00000511313 OPRPNQ99935 248 aaPredicted RBP6.69□□□□□ -1.34
POLR2J3-215ENST00000511313 B5MCH6 92 aa6.68□□□□□ -1.34
POLR2J3-215ENST00000511313 ZNF575Q86XF7 245 aa6.68□□□□□ -1.34
POLR2J3-215ENST00000511313 NDUFC2-KCTD14E9PQ53 114 aa6.68□□□□□ -1.34
POLR2J3-215ENST00000511313 IGLC3P0DOY3 106 aa6.68□□□□□ -1.34
POLR2J3-215ENST00000511313 HIST1H2BKO60814 126 aa6.68□□□□□ -1.34
POLR2J3-215ENST00000511313 HIST1H2BJP06899 126 aa6.68□□□□□ -1.34
POLR2J3-215ENST00000511313 PDE6GP18545 87 aa6.68□□□□□ -1.34
POLR2J3-215ENST00000511313 HIST1H2BOP23527 126 aa6.68□□□□□ -1.34
POLR2J3-215ENST00000511313 HIST1H2BBP33778 126 aa6.68□□□□□ -1.34
POLR2J3-215ENST00000511313 FUSP35637 526 aaKnown RBP eCLIP6.68□□□□□ -1.34
POLR2J3-215ENST00000511313 HIST1H2BDP58876 126 aa6.68□□□□□ -1.34
POLR2J3-215ENST00000511313 HIST1H2BCP62807 126 aa6.68□□□□□ -1.34
POLR2J3-215ENST00000511313 HIST2H2BEQ16778 126 aa6.68□□□□□ -1.34
POLR2J3-215ENST00000511313 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.68□□□□□ -1.34
POLR2J3-215ENST00000511313 HIST1H2BHQ93079 126 aa6.68□□□□□ -1.34
POLR2J3-215ENST00000511313 HIST1H2BNQ99877 126 aa6.68□□□□□ -1.34
POLR2J3-215ENST00000511313 HIST1H2BMQ99879 126 aa6.68□□□□□ -1.34
POLR2J3-215ENST00000511313 C11orf21Q9P2W6 132 aa6.68□□□□□ -1.34
POLR2J3-215ENST00000511313 A0A087WTM6 91 aa6.67□□□□□ -1.34
POLR2J3-215ENST00000511313 LOC107984156A0A0G2JMH3 177 aa6.67□□□□□ -1.34
POLR2J3-215ENST00000511313 A0A0U1RRA0 63 aa6.67□□□□□ -1.34
POLR2J3-215ENST00000511313 ARL17AQ8IVW1 177 aa6.67□□□□□ -1.34
POLR2J3-215ENST00000511313 PRYO14603 147 aa6.67□□□□□ -1.34
POLR2J3-215ENST00000511313 H7C2G1 150 aa6.67□□□□□ -1.34
POLR2J3-215ENST00000511313 M0QXV9 152 aa6.67□□□□□ -1.34
POLR2J3-215ENST00000511313 SPANXCQ9NY87 97 aa6.66□□□□□ -1.34
POLR2J3-215ENST00000511313 DDTP30046 118 aa6.66□□□□□ -1.34
POLR2J3-215ENST00000511313 GVQW2A0A096LPI5 108 aaPredicted RBP6.65□□□□□ -1.34
POLR2J3-215ENST00000511313 C9orf153Q5TBE3 101 aa6.65□□□□□ -1.34
POLR2J3-215ENST00000511313 FAM19A5Q7Z5A7 132 aaPredicted RBP6.65□□□□□ -1.34
POLR2J3-215ENST00000511313 NACAE9PAV3 2078 aa6.65□□□□□ -1.34
POLR2J3-215ENST00000511313 TRBV10-2A0A0K0K1G8 114 aa6.65□□□□□ -1.34
POLR2J3-215ENST00000511313 VPS25Q9BRG1 176 aa6.65□□□□□ -1.34
POLR2J3-215ENST00000511313 PLXNB1O43157 2135 aa6.65□□□□□ -1.35
POLR2J3-215ENST00000511313 DSCAML1Q8TD84 2053 aa6.64□□□□□ -1.35
POLR2J3-215ENST00000511313 E9PLD3 99 aa6.64□□□□□ -1.35
POLR2J3-215ENST00000511313 RNASE13Q5GAN3 156 aaKnown RBP6.64□□□□□ -1.35
POLR2J3-215ENST00000511313 ZNF625Q96I27 306 aaPredicted RBP6.64□□□□□ -1.35
POLR2J3-215ENST00000511313 SPAG11AQ6PDA7 123 aa6.64□□□□□ -1.35
POLR2J3-215ENST00000511313 LECT2O14960 151 aa6.63□□□□□ -1.35
POLR2J3-215ENST00000511313 RPL39P62891 51 aaKnown RBP6.63□□□□□ -1.35
POLR2J3-215ENST00000511313 LRCOL1A6NCL2 159 aa6.63□□□□□ -1.35
POLR2J3-215ENST00000511313 Q8N814 137 aa6.63□□□□□ -1.35
POLR2J3-215ENST00000511313 DEFB104AQ8WTQ1 72 aa6.63□□□□□ -1.35
POLR2J3-215ENST00000511313 TP73-AS1Q9UF72 201 aa6.63□□□□□ -1.35
POLR2J3-215ENST00000511313 NRACQ8N912 160 aa6.62□□□□□ -1.35
POLR2J3-215ENST00000511313 HIGD2AQ9BW72 106 aa6.62□□□□□ -1.35
POLR2J3-215ENST00000511313 KMT2BQ9UMN6 2715 aaPredicted RBP6.62□□□□□ -1.35
POLR2J3-215ENST00000511313 C1orf137Q5JT78 98 aa6.62□□□□□ -1.35
POLR2J3-215ENST00000511313 FREM2Q5SZK8 3169 aa6.62□□□□□ -1.35
POLR2J3-215ENST00000511313 PRO1933Q9H354 126 aa6.62□□□□□ -1.35
POLR2J3-215ENST00000511313 HIST3H2BBQ8N257 126 aa6.61□□□□□ -1.35
POLR2J3-215ENST00000511313 RPL37AP8A6NKH3 93 aa6.61□□□□□ -1.35
POLR2J3-215ENST00000511313 Q6JHZ5 121 aa6.61□□□□□ -1.35
POLR2J3-215ENST00000511313 GCN1Q92616 2671 aaKnown RBP6.61□□□□□ -1.35
POLR2J3-215ENST00000511313 MIR7-3HGQ8N6C7 128 aa6.61□□□□□ -1.35
POLR2J3-215ENST00000511313 DSCR8Q96T75 97 aa6.61□□□□□ -1.35
POLR2J3-215ENST00000511313 GIG44P09565 113 aaPredicted RBP6.6□□□□□ -1.35
POLR2J3-215ENST00000511313 A0A1B0GX51 115 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 1544.4 ms