RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 TEX261Q6UWH6 196 aa2.58□□□□□ -2
CALCOCO2-213ENST00000509112 MRPL52Q86TS9 123 aaKnown RBP2.58□□□□□ -2
CALCOCO2-213ENST00000509112 MBD3L1Q8WWY6 194 aa2.58□□□□□ -2
CALCOCO2-213ENST00000509112 OCR1Q9BZK8 76 aa2.58□□□□□ -2
CALCOCO2-213ENST00000509112 G3V3Q6 166 aa2.57□□□□□ -2
CALCOCO2-213ENST00000509112 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.57□□□□□ -2
CALCOCO2-213ENST00000509112 PFDN1O60925 122 aa2.57□□□□□ -2
CALCOCO2-213ENST00000509112 CTRLP40313 264 aa2.57□□□□□ -2
CALCOCO2-213ENST00000509112 UBE2D1P51668 147 aa2.57□□□□□ -2
CALCOCO2-213ENST00000509112 KRTAP10-6P60371 365 aaPredicted RBP2.57□□□□□ -2
CALCOCO2-213ENST00000509112 IFITM3Q01628 133 aa2.57□□□□□ -2
CALCOCO2-213ENST00000509112 MEF2BQ02080 365 aaPredicted RBP2.57□□□□□ -2
CALCOCO2-213ENST00000509112 TMUB2Q71RG4 321 aa2.57□□□□□ -2
CALCOCO2-213ENST00000509112 Q8N377 158 aa2.57□□□□□ -2
CALCOCO2-213ENST00000509112 C9orf62Q8N4C0 152 aa2.57□□□□□ -2
CALCOCO2-213ENST00000509112 TMEM101Q96IK0 257 aa2.57□□□□□ -2
CALCOCO2-213ENST00000509112 BTF3L4Q96K17 158 aa2.57□□□□□ -2
CALCOCO2-213ENST00000509112 BIN3Q9NQY0 253 aa2.57□□□□□ -2
CALCOCO2-213ENST00000509112 CDC42SE2Q9NRR3 84 aa2.57□□□□□ -2
CALCOCO2-213ENST00000509112 MRPL35Q9NZE8 188 aaKnown RBP2.57□□□□□ -2
CALCOCO2-213ENST00000509112 CSDC2Q9Y534 153 aaKnown RBP2.57□□□□□ -2
CALCOCO2-213ENST00000509112 IGKV3OR2-268A0A0C4DH90 116 aa2.56□□□□□ -2
CALCOCO2-213ENST00000509112 MUC21A0A140T8X8 626 aa2.56□□□□□ -2
CALCOCO2-213ENST00000509112 C1orf196B1AJZ1 125 aa2.56□□□□□ -2
CALCOCO2-213ENST00000509112 UMAD1C9J7I0 102 aa2.56□□□□□ -2
CALCOCO2-213ENST00000509112 I3L3M4 83 aa2.56□□□□□ -2
CALCOCO2-213ENST00000509112 GIPP09681 153 aaPredicted RBP2.56□□□□□ -2
CALCOCO2-213ENST00000509112 RPL35P42766 123 aaKnown RBP2.56□□□□□ -2
CALCOCO2-213ENST00000509112 XCL1P47992 114 aa2.56□□□□□ -2
CALCOCO2-213ENST00000509112 DEFA1P59665 94 aa2.56□□□□□ -2
CALCOCO2-213ENST00000509112 DEFA3P59666 94 aa2.56□□□□□ -2
CALCOCO2-213ENST00000509112 SMAGPQ0VAQ4 97 aa2.56□□□□□ -2
CALCOCO2-213ENST00000509112 TPRXLQ17RH7 258 aa2.56□□□□□ -2
CALCOCO2-213ENST00000509112 RNASEKQ6P5S7 137 aaKnown RBP2.56□□□□□ -2
CALCOCO2-213ENST00000509112 PHF5AQ7RTV0 110 aaKnown RBP2.56□□□□□ -2
CALCOCO2-213ENST00000509112 GATD1Q8NB37 220 aa2.56□□□□□ -2
CALCOCO2-213ENST00000509112 OR2D3Q8NGH3 330 aa2.56□□□□□ -2
CALCOCO2-213ENST00000509112 OR10D4PQ8NGN7 298 aa2.56□□□□□ -2
CALCOCO2-213ENST00000509112 CAMK2N2Q96S95 79 aa2.56□□□□□ -2
CALCOCO2-213ENST00000509112 IMMP2LQ96T52 175 aa2.56□□□□□ -2
CALCOCO2-213ENST00000509112 RPP21Q9H633 154 aaKnown RBP2.56□□□□□ -2
CALCOCO2-213ENST00000509112 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.55□□□□□ -2
CALCOCO2-213ENST00000509112 IGKV2-29A2NJV5 120 aaPredicted RBP2.55□□□□□ -2
CALCOCO2-213ENST00000509112 SDHAF1A6NFY7 115 aa2.55□□□□□ -2
CALCOCO2-213ENST00000509112 COX7A2LO14548 114 aa2.55□□□□□ -2
CALCOCO2-213ENST00000509112 BCL2L11O43521 198 aa2.55□□□□□ -2
CALCOCO2-213ENST00000509112 NUPR1O60356 82 aa2.55□□□□□ -2
CALCOCO2-213ENST00000509112 BCL2P10415 239 aa2.55□□□□□ -2
CALCOCO2-213ENST00000509112 CCL20P78556 96 aa2.55□□□□□ -2
CALCOCO2-213ENST00000509112 TMEM241Q24JQ0 296 aa2.55□□□□□ -2
CALCOCO2-213ENST00000509112 LYZL1Q6UWQ5 148 aa2.55□□□□□ -2
CALCOCO2-213ENST00000509112 LINC00526Q96FQ7 95 aa2.55□□□□□ -2
CALCOCO2-213ENST00000509112 MRAP2Q96G30 205 aa2.55□□□□□ -2
CALCOCO2-213ENST00000509112 CYTL1Q9NRR1 136 aa2.55□□□□□ -2
CALCOCO2-213ENST00000509112 CRCT1Q9UGL9 99 aa2.55□□□□□ -2
CALCOCO2-213ENST00000509112 TRBV27A0A0K0K1C4 114 aa2.54□□□□□ -2
CALCOCO2-213ENST00000509112 ZNF861PO60384 105 aa2.54□□□□□ -2
CALCOCO2-213ENST00000509112 IFNA1P01562 189 aa2.54□□□□□ -2
CALCOCO2-213ENST00000509112 PMCHP20382 165 aa2.54□□□□□ -2
CALCOCO2-213ENST00000509112 POLR2KP53803 58 aaKnown RBP2.54□□□□□ -2
CALCOCO2-213ENST00000509112 SSTP61278 116 aa2.54□□□□□ -2
CALCOCO2-213ENST00000509112 RPL18AQ02543 176 aaKnown RBP2.54□□□□□ -2
CALCOCO2-213ENST00000509112 Q5BKY6 102 aa2.54□□□□□ -2
CALCOCO2-213ENST00000509112 CENPWQ5EE01 88 aa2.54□□□□□ -2
CALCOCO2-213ENST00000509112 SMIM15Q7Z3B0 74 aa2.54□□□□□ -2
CALCOCO2-213ENST00000509112 KCNRGQ8N5I3 272 aa2.54□□□□□ -2
CALCOCO2-213ENST00000509112 TIMM21Q9BVV7 248 aa2.54□□□□□ -2
CALCOCO2-213ENST00000509112 TPPP3Q9BW30 176 aa2.54□□□□□ -2
CALCOCO2-213ENST00000509112 MANBALQ9NQG1 85 aa2.54□□□□□ -2
CALCOCO2-213ENST00000509112 ALG5Q9Y673 324 aa2.54□□□□□ -2
CALCOCO2-213ENST00000509112 FSIP2Q5CZC0 6907 aa2.54□□□□□ -2
CALCOCO2-213ENST00000509112 C7orf77A4D0Y5 90 aa2.53□□□□□ -2
CALCOCO2-213ENST00000509112 NDUFA1O15239 70 aa2.53□□□□□ -2
CALCOCO2-213ENST00000509112 GNG4P50150 75 aa2.53□□□□□ -2
CALCOCO2-213ENST00000509112 FOXA3P55318 350 aaPredicted RBP2.53□□□□□ -2
CALCOCO2-213ENST00000509112 SPAG11BQ08648 103 aa2.53□□□□□ -2
CALCOCO2-213ENST00000509112 ZNF345Q14585 488 aa2.53□□□□□ -2
CALCOCO2-213ENST00000509112 KRTAP11-1Q8IUC1 163 aa2.53□□□□□ -2
CALCOCO2-213ENST00000509112 SFT2D1Q8WV19 159 aa2.53□□□□□ -2
CALCOCO2-213ENST00000509112 RPL39LQ96EH5 51 aaKnown RBP2.53□□□□□ -2
CALCOCO2-213ENST00000509112 SMDT1Q9H4I9 107 aa2.53□□□□□ -2
CALCOCO2-213ENST00000509112 ST20Q9HBF5 79 aa2.53□□□□□ -2
CALCOCO2-213ENST00000509112 UBE2D4Q9Y2X8 147 aa2.53□□□□□ -2
CALCOCO2-213ENST00000509112 FXYD6-FXYD2A0A087WZ82 144 aa2.52□□□□□ -2.01
CALCOCO2-213ENST00000509112 IGHV3OR16-9A0A0B4J2B5 98 aa2.52□□□□□ -2.01
CALCOCO2-213ENST00000509112 TRBV30A0A0K0K1B3 111 aa2.52□□□□□ -2.01
CALCOCO2-213ENST00000509112 RAB19A4D1S5 217 aa2.52□□□□□ -2.01
CALCOCO2-213ENST00000509112 M0QXV9 152 aa2.52□□□□□ -2.01
CALCOCO2-213ENST00000509112 PDE6DO43924 150 aa2.52□□□□□ -2.01
CALCOCO2-213ENST00000509112 PPP1R17O96001 155 aa2.52□□□□□ -2.01
CALCOCO2-213ENST00000509112 CRYGAP11844 174 aa2.52□□□□□ -2.01
CALCOCO2-213ENST00000509112 TAGLN2P37802 199 aaKnown RBP2.52□□□□□ -2.01
CALCOCO2-213ENST00000509112 FAM213BQ8TBF2 198 aa2.52□□□□□ -2.01
CALCOCO2-213ENST00000509112 TRBV20OR9-2A0A075B6H5 130 aa2.51□□□□□ -2.01
CALCOCO2-213ENST00000509112 FAM168BA1KXE4 195 aa2.51□□□□□ -2.01
CALCOCO2-213ENST00000509112 NDUFC2-KCTD14E9PQ53 114 aa2.51□□□□□ -2.01
CALCOCO2-213ENST00000509112 TEX46H3BTG2 121 aa2.51□□□□□ -2.01
CALCOCO2-213ENST00000509112 PPP1R2P9O14990 202 aa2.51□□□□□ -2.01
CALCOCO2-213ENST00000509112 TCAPO15273 167 aa2.51□□□□□ -2.01
CALCOCO2-213ENST00000509112 NDUFV3P56181 108 aaKnown RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms