RNA–Protein interactions for RNA: ENST00000508940.1

PROM1-209, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-209ENST00000508940 PLAC8Q9NZF1 115 aa15.47■□□□□ 0.07
PROM1-209ENST00000508940 CYSLTR1Q9Y271 337 aa15.47■□□□□ 0.07
PROM1-209ENST00000508940 J3QL48 77 aa15.46■□□□□ 0.07
PROM1-209ENST00000508940 TMEM141Q96I45 108 aa15.46■□□□□ 0.07
PROM1-209ENST00000508940 CAMK2N2Q96S95 79 aa15.46■□□□□ 0.07
PROM1-209ENST00000508940 LINC00474Q9P2X8 69 aa15.46■□□□□ 0.07
PROM1-209ENST00000508940 K7EMI3 77 aa15.45■□□□□ 0.06
PROM1-209ENST00000508940 KIAA1644Q3SXP7 199 aa15.45■□□□□ 0.06
PROM1-209ENST00000508940 C2orf66Q6UXQ4 117 aa15.45■□□□□ 0.06
PROM1-209ENST00000508940 IGLV4-3A0A075B6K6 122 aa15.44■□□□□ 0.06
PROM1-209ENST00000508940 A0A096LNI7 61 aa15.44■□□□□ 0.06
PROM1-209ENST00000508940 STPG4Q8N801 248 aa15.44■□□□□ 0.06
PROM1-209ENST00000508940 C2orf48Q96LS8 159 aa15.44■□□□□ 0.06
PROM1-209ENST00000508940 TGIF2-C20orf24A0A0A6YYL0 155 aa15.43■□□□□ 0.06
PROM1-209ENST00000508940 IGHV3OR16-9A0A0B4J2B5 98 aa15.43■□□□□ 0.06
PROM1-209ENST00000508940 SPAG11BQ08648 103 aa15.43■□□□□ 0.06
PROM1-209ENST00000508940 Q6ZN92 141 aa15.43■□□□□ 0.06
PROM1-209ENST00000508940 TEX43Q6ZNM6 134 aa15.43■□□□□ 0.06
PROM1-209ENST00000508940 Q6ZRU5 148 aa15.43■□□□□ 0.06
PROM1-209ENST00000508940 G0S2P27469 103 aa15.42■□□□□ 0.06
PROM1-209ENST00000508940 OR10D4PQ8NGN7 298 aa15.42■□□□□ 0.06
PROM1-209ENST00000508940 C7orf33Q8WU49 177 aa15.42■□□□□ 0.06
PROM1-209ENST00000508940 ORAOV1Q8WV07 137 aa15.42■□□□□ 0.06
PROM1-209ENST00000508940 RPS10P5Q9NQ39 176 aa15.42■□□□□ 0.06
PROM1-209ENST00000508940 LOC107984640A0A0U1RRK4 108 aa15.41■□□□□ 0.06
PROM1-209ENST00000508940 C10orf91Q5T1B1 145 aa15.41■□□□□ 0.06
PROM1-209ENST00000508940 C2orf88Q9BSF0 95 aa15.41■□□□□ 0.06
PROM1-209ENST00000508940 GNB1LQ9BYB4 327 aa15.41■□□□□ 0.06
PROM1-209ENST00000508940 RHEBQ15382 184 aa15.4■□□□□ 0.06
PROM1-209ENST00000508940 COX19Q49B96 90 aa15.4■□□□□ 0.06
PROM1-209ENST00000508940 CARHSP1Q9Y2V2 147 aaKnown RBP15.4■□□□□ 0.06
PROM1-209ENST00000508940 KRTAP29-1A8MX34 341 aaPredicted RBP15.39■□□□□ 0.05
PROM1-209ENST00000508940 VCX2Q9H322 139 aa15.39■□□□□ 0.05
PROM1-209ENST00000508940 GAGE2BQ13066 116 aa15.38■□□□□ 0.05
PROM1-209ENST00000508940 F8WDY8 70 aa15.37■□□□□ 0.05
PROM1-209ENST00000508940 NPSP0C0P6 89 aa15.37■□□□□ 0.05
PROM1-209ENST00000508940 LINC00242Q5T6M2 205 aa15.37■□□□□ 0.05
PROM1-209ENST00000508940 PTTG1IPP53801 180 aa15.36■□□□□ 0.05
PROM1-209ENST00000508940 DMBT1Q9UGM3 2413 aaPredicted RBP15.36■□□□□ 0.05
PROM1-209ENST00000508940 A0A087WZ39 114 aa15.35■□□□□ 0.05
PROM1-209ENST00000508940 UBE2D1P51668 147 aa15.35■□□□□ 0.05
PROM1-209ENST00000508940 PAPPA-AS1Q5QFB9 102 aa15.35■□□□□ 0.05
PROM1-209ENST00000508940 IGIPA6NJ69 53 aa15.34■□□□□ 0.05
PROM1-209ENST00000508940 NDUFA1O15239 70 aa15.34■□□□□ 0.05
PROM1-209ENST00000508940 MT-ND6P03923 174 aa15.34■□□□□ 0.05
PROM1-209ENST00000508940 RNF151Q2KHN1 245 aa15.34■□□□□ 0.05
PROM1-209ENST00000508940 ZC2HC1BQ5TFG8 222 aa15.34■□□□□ 0.05
PROM1-209ENST00000508940 AMELXQ99217 191 aa15.34■□□□□ 0.05
PROM1-209ENST00000508940 FABP9Q0Z7S8 132 aa15.33■□□□□ 0.04
PROM1-209ENST00000508940 ALKBH7Q9BT30 221 aaPredicted RBP15.33■□□□□ 0.04
PROM1-209ENST00000508940 MRPL18Q9H0U6 180 aaKnown RBP15.33■□□□□ 0.04
PROM1-209ENST00000508940 OXTP01178 125 aa15.32■□□□□ 0.04
PROM1-209ENST00000508940 HNRNPA3P51991 378 aaKnown RBP15.32■□□□□ 0.04
PROM1-209ENST00000508940 RPL18AQ02543 176 aaKnown RBP15.32■□□□□ 0.04
PROM1-209ENST00000508940 TOMM6Q96B49 74 aa15.32■□□□□ 0.04
PROM1-209ENST00000508940 MRPL35Q9NZE8 188 aaKnown RBP15.32■□□□□ 0.04
PROM1-209ENST00000508940 MYCBP2O75592 4640 aa15.32■□□□□ 0.04
PROM1-209ENST00000508940 A0A0J9YXV3 536 aa15.31■□□□□ 0.04
PROM1-209ENST00000508940 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.31■□□□□ 0.04
PROM1-209ENST00000508940 NDUFA5Q16718 116 aa15.31■□□□□ 0.04
PROM1-209ENST00000508940 LINC00173Q6ZV60 143 aa15.31■□□□□ 0.04
PROM1-209ENST00000508940 APOC3P02656 99 aa15.3■□□□□ 0.04
PROM1-209ENST00000508940 TIMM17AQ99595 171 aa15.3■□□□□ 0.04
PROM1-209ENST00000508940 LINC01561Q8N1V8 128 aa15.29■□□□□ 0.04
PROM1-209ENST00000508940 SCGB3A1Q96QR1 104 aa15.29■□□□□ 0.04
PROM1-209ENST00000508940 LINC01549A6NIU2 74 aa15.28■□□□□ 0.04
PROM1-209ENST00000508940 SEC11AP67812 179 aa15.28■□□□□ 0.04
PROM1-209ENST00000508940 UNQ6190/PRO20217Q6UXQ8 127 aa15.28■□□□□ 0.04
PROM1-209ENST00000508940 FA2HQ7L5A8 372 aa15.28■□□□□ 0.04
PROM1-209ENST00000508940 ERASQ7Z444 233 aa15.28■□□□□ 0.04
PROM1-209ENST00000508940 SMCO4Q9NRQ5 59 aa15.28■□□□□ 0.04
PROM1-209ENST00000508940 SNAPINO95295 136 aa15.27■□□□□ 0.04
PROM1-209ENST00000508940 C10orf25Q5T742 122 aa15.26■□□□□ 0.03
PROM1-209ENST00000508940 SVBPQ8N300 66 aa15.26■□□□□ 0.03
PROM1-209ENST00000508940 HERVK_113P63121 156 aa15.25■□□□□ 0.03
PROM1-209ENST00000508940 KIAA0087Q14695 138 aa15.25■□□□□ 0.03
PROM1-209ENST00000508940 FAM19A3Q7Z5A8 133 aa15.25■□□□□ 0.03
PROM1-209ENST00000508940 GEMIN7Q9H840 131 aaKnown RBP15.25■□□□□ 0.03
PROM1-209ENST00000508940 LINC01546A6NGU7 62 aa15.24■□□□□ 0.03
PROM1-209ENST00000508940 PRSS2P07478 247 aa15.24■□□□□ 0.03
PROM1-209ENST00000508940 C6orf48Q9UBA6 75 aa15.24■□□□□ 0.03
PROM1-209ENST00000508940 TRAPPC1Q9Y5R8 145 aa15.24■□□□□ 0.03
PROM1-209ENST00000508940 PRR3P79522 188 aaKnown RBP15.23■□□□□ 0.03
PROM1-209ENST00000508940 A0A1W2PNN7 141 aa15.22■□□□□ 0.03
PROM1-209ENST00000508940 C9orf116Q5BN46 136 aaPredicted RBP15.22■□□□□ 0.03
PROM1-209ENST00000508940 PACRGQ96M98 296 aaPredicted RBP15.22■□□□□ 0.03
PROM1-209ENST00000508940 TOMM7Q9P0U1 55 aa15.22■□□□□ 0.03
PROM1-209ENST00000508940 TRBV30A0A0K0K1B3 111 aa15.2■□□□□ 0.02
PROM1-209ENST00000508940 TLX1NBP0CAT3 122 aa15.2■□□□□ 0.02
PROM1-209ENST00000508940 C6orf226Q5I0X4 101 aa15.2■□□□□ 0.02
PROM1-209ENST00000508940 C2orf82Q6UX34 121 aa15.2■□□□□ 0.02
PROM1-209ENST00000508940 CKS1BP61024 79 aa15.19■□□□□ 0.02
PROM1-209ENST00000508940 Q6ZRP5 223 aa15.19■□□□□ 0.02
PROM1-209ENST00000508940 CDKN2A-AS1Q9UH64 79 aa15.19■□□□□ 0.02
PROM1-209ENST00000508940 PKHD1L1Q86WI1 4243 aa15.19■□□□□ 0.02
PROM1-209ENST00000508940 GAGE2EQ4V326 116 aa15.18■□□□□ 0.02
PROM1-209ENST00000508940 GAGE2DQ9UEU5 116 aa15.18■□□□□ 0.02
PROM1-209ENST00000508940 HERC1Q15751 4861 aa15.17■□□□□ 0.02
PROM1-209ENST00000508940 Q8IZM0 81 aa15.17■□□□□ 0.02
PROM1-209ENST00000508940 LINC00469Q8N7U9 141 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms