RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 RAB19A4D1S5 217 aa6.36□□□□□ -1.39
NEDD9-212ENST00000508800 CENPWQ5EE01 88 aa6.36□□□□□ -1.39
NEDD9-212ENST00000508800 UBE2D4Q9Y2X8 147 aa6.36□□□□□ -1.39
NEDD9-212ENST00000508800 C22orf24Q9Y442 160 aa6.36□□□□□ -1.39
NEDD9-212ENST00000508800 FCER1GP30273 86 aa6.35□□□□□ -1.39
NEDD9-212ENST00000508800 POLR2KP53803 58 aaKnown RBP6.35□□□□□ -1.39
NEDD9-212ENST00000508800 DEFA1P59665 94 aa6.35□□□□□ -1.39
NEDD9-212ENST00000508800 C11orf52Q96A22 123 aa6.35□□□□□ -1.39
NEDD9-212ENST00000508800 TIMM21Q9BVV7 248 aa6.35□□□□□ -1.39
NEDD9-212ENST00000508800 RNASE7Q9H1E1 156 aaKnown RBP6.35□□□□□ -1.39
NEDD9-212ENST00000508800 RNASE13Q5GAN3 156 aaKnown RBP6.34□□□□□ -1.39
NEDD9-212ENST00000508800 MRPL55Q7Z7F7 128 aaKnown RBP6.34□□□□□ -1.39
NEDD9-212ENST00000508800 TMEM18Q96B42 140 aa6.34□□□□□ -1.39
NEDD9-212ENST00000508800 GNG4P50150 75 aa6.33□□□□□ -1.4
NEDD9-212ENST00000508800 KRTAP19-2Q3LHN2 52 aa6.33□□□□□ -1.4
NEDD9-212ENST00000508800 Q6ZUT4 128 aa6.33□□□□□ -1.4
NEDD9-212ENST00000508800 KCNRGQ8N5I3 272 aa6.33□□□□□ -1.4
NEDD9-212ENST00000508800 SFT2D1Q8WV19 159 aa6.33□□□□□ -1.4
NEDD9-212ENST00000508800 MBD3L1Q8WWY6 194 aa6.33□□□□□ -1.4
NEDD9-212ENST00000508800 UBE2AP49459 152 aa6.32□□□□□ -1.4
NEDD9-212ENST00000508800 FOXA3P55318 350 aaPredicted RBP6.32□□□□□ -1.4
NEDD9-212ENST00000508800 KIAA0087Q14695 138 aa6.32□□□□□ -1.4
NEDD9-212ENST00000508800 LINC00299Q6ZSB3 139 aa6.32□□□□□ -1.4
NEDD9-212ENST00000508800 TGIF2-C20orf24A0A0A6YYL0 155 aa6.31□□□□□ -1.4
NEDD9-212ENST00000508800 VCYO14598 125 aa6.31□□□□□ -1.4
NEDD9-212ENST00000508800 UPK1BO75841 260 aa6.31□□□□□ -1.4
NEDD9-212ENST00000508800 CCL20P78556 96 aa6.31□□□□□ -1.4
NEDD9-212ENST00000508800 KRTAP13-1Q8IUC0 172 aa6.31□□□□□ -1.4
NEDD9-212ENST00000508800 S100ZQ8WXG8 99 aa6.31□□□□□ -1.4
NEDD9-212ENST00000508800 KIR2DL4Q99706 377 aa6.31□□□□□ -1.4
NEDD9-212ENST00000508800 ZNF727A8MUV8 499 aa6.3□□□□□ -1.4
NEDD9-212ENST00000508800 UMAD1C9J7I0 102 aa6.3□□□□□ -1.4
NEDD9-212ENST00000508800 DAND5Q8N907 189 aa6.3□□□□□ -1.4
NEDD9-212ENST00000508800 MANBALQ9NQG1 85 aa6.3□□□□□ -1.4
NEDD9-212ENST00000508800 NDUFA12Q9UI09 145 aa6.3□□□□□ -1.4
NEDD9-212ENST00000508800 PPP1R17O96001 155 aa6.29□□□□□ -1.4
NEDD9-212ENST00000508800 XP32Q5T750 250 aa6.29□□□□□ -1.4
NEDD9-212ENST00000508800 NUDT10Q8NFP7 164 aa6.29□□□□□ -1.4
NEDD9-212ENST00000508800 NUDT11Q96G61 164 aa6.29□□□□□ -1.4
NEDD9-212ENST00000508800 A0A1B0GV50 99 aa6.28□□□□□ -1.4
NEDD9-212ENST00000508800 M0R2T5 61 aa6.28□□□□□ -1.4
NEDD9-212ENST00000508800 C2orf82Q6UX34 121 aa6.28□□□□□ -1.4
NEDD9-212ENST00000508800 FAM213BQ8TBF2 198 aa6.28□□□□□ -1.4
NEDD9-212ENST00000508800 FXYD6-FXYD2A0A087WZ82 144 aa6.27□□□□□ -1.41
NEDD9-212ENST00000508800 IFITM10A6NMD0 228 aa6.27□□□□□ -1.41
NEDD9-212ENST00000508800 TCAPO15273 167 aa6.27□□□□□ -1.41
NEDD9-212ENST00000508800 HBBP68871 147 aa6.27□□□□□ -1.41
NEDD9-212ENST00000508800 MRPS36P82909 103 aaKnown RBP6.27□□□□□ -1.41
NEDD9-212ENST00000508800 FAM19A2Q8N3H0 131 aa6.27□□□□□ -1.41
NEDD9-212ENST00000508800 XAGE1AQ9HD64 81 aa6.27□□□□□ -1.41
NEDD9-212ENST00000508800 SPANXA1Q9NS26 97 aa6.27□□□□□ -1.41
NEDD9-212ENST00000508800 H2AFB1P0C5Y9 115 aa6.26□□□□□ -1.41
NEDD9-212ENST00000508800 LINC00469Q8N7U9 141 aa6.26□□□□□ -1.41
NEDD9-212ENST00000508800 LINC00167Q96N53 147 aa6.26□□□□□ -1.41
NEDD9-212ENST00000508800 SSPOA2VEC9 5147 aa6.26□□□□□ -1.41
NEDD9-212ENST00000508800 TRBV20OR9-2A0A075B6H5 130 aa6.25□□□□□ -1.41
NEDD9-212ENST00000508800 RPL37AP8A6NKH3 93 aa6.25□□□□□ -1.41
NEDD9-212ENST00000508800 PPP1R2P9O14990 202 aa6.25□□□□□ -1.41
NEDD9-212ENST00000508800 PDE6DO43924 150 aa6.25□□□□□ -1.41
NEDD9-212ENST00000508800 GIPP09681 153 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-212ENST00000508800 CKS1BP61024 79 aa6.25□□□□□ -1.41
NEDD9-212ENST00000508800 SUMO2P61956 95 aaKnown RBP6.25□□□□□ -1.41
NEDD9-212ENST00000508800 LINC01561Q8N1V8 128 aa6.25□□□□□ -1.41
NEDD9-212ENST00000508800 C3orf22Q8N5N4 141 aa6.25□□□□□ -1.41
NEDD9-212ENST00000508800 BORCS7Q96B45 105 aa6.25□□□□□ -1.41
NEDD9-212ENST00000508800 TMEM191AQ9H0A3 160 aa6.25□□□□□ -1.41
NEDD9-212ENST00000508800 SPINK1P00995 79 aa6.24□□□□□ -1.41
NEDD9-212ENST00000508800 PRSS2P07478 247 aa6.24□□□□□ -1.41
NEDD9-212ENST00000508800 A8MWL6 223 aa6.23□□□□□ -1.41
NEDD9-212ENST00000508800 PNRC1Q12796 327 aaPredicted RBP6.23□□□□□ -1.41
NEDD9-212ENST00000508800 Q5BKY6 102 aa6.23□□□□□ -1.41
NEDD9-212ENST00000508800 GNG13Q9P2W3 67 aa6.23□□□□□ -1.41
NEDD9-212ENST00000508800 FLGP20930 4061 aaPredicted RBP6.22□□□□□ -1.41
NEDD9-212ENST00000508800 RAB4AP20338 218 aa6.22□□□□□ -1.41
NEDD9-212ENST00000508800 FAM104AQ969W3 186 aa6.22□□□□□ -1.41
NEDD9-212ENST00000508800 GNB1LQ9BYB4 327 aa6.22□□□□□ -1.41
NEDD9-212ENST00000508800 FCGBPQ9Y6R7 5405 aaPredicted RBP6.21□□□□□ -1.42
NEDD9-212ENST00000508800 RPL39P62891 51 aaKnown RBP6.21□□□□□ -1.42
NEDD9-212ENST00000508800 RPL32P62910 135 aaKnown RBP6.21□□□□□ -1.42
NEDD9-212ENST00000508800 IFITM3Q01628 133 aa6.21□□□□□ -1.42
NEDD9-212ENST00000508800 C6orf226Q5I0X4 101 aa6.21□□□□□ -1.42
NEDD9-212ENST00000508800 Q8IZM0 81 aa6.21□□□□□ -1.42
NEDD9-212ENST00000508800 MED9Q9NWA0 146 aa6.21□□□□□ -1.42
NEDD9-212ENST00000508800 NDUFA13Q9P0J0 144 aa6.21□□□□□ -1.42
NEDD9-212ENST00000508800 IGLV5-37A0A075B6J1 123 aa6.2□□□□□ -1.42
NEDD9-212ENST00000508800 A0A1B0GUT8 65 aa6.2□□□□□ -1.42
NEDD9-212ENST00000508800 RPS29P62273 56 aaKnown RBP6.2□□□□□ -1.42
NEDD9-212ENST00000508800 CT83Q5H943 113 aa6.2□□□□□ -1.42
NEDD9-212ENST00000508800 NKAPP1Q8N9T2 125 aa6.2□□□□□ -1.42
NEDD9-212ENST00000508800 PLEKHB2Q96CS7 222 aa6.2□□□□□ -1.42
NEDD9-212ENST00000508800 USH2AO75445 5202 aa6.2□□□□□ -1.42
NEDD9-212ENST00000508800 IGLV8-61A0A075B6I0 122 aa6.19□□□□□ -1.42
NEDD9-212ENST00000508800 GAGE10A6NGK3 116 aa6.19□□□□□ -1.42
NEDD9-212ENST00000508800 F8VRH5 84 aa6.19□□□□□ -1.42
NEDD9-212ENST00000508800 TEX46H3BTG2 121 aa6.19□□□□□ -1.42
NEDD9-212ENST00000508800 PRLHP81277 87 aa6.19□□□□□ -1.42
NEDD9-212ENST00000508800 Q6ZN92 141 aa6.19□□□□□ -1.42
NEDD9-212ENST00000508800 AMN1Q8IY45 258 aa6.19□□□□□ -1.42
NEDD9-212ENST00000508800 NRACQ8N912 160 aa6.19□□□□□ -1.42
NEDD9-212ENST00000508800 C20orf78Q9BR46 151 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms