RNA–Protein interactions for RNA: ENST00000507536.1

PDGFRA-205, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 1,146 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-205ENST00000507536 TMEM250H0YL14 139 aa6.25□□□□□ -1.41
PDGFRA-205ENST00000507536 SMKR1H3BMG3 65 aa6.25□□□□□ -1.41
PDGFRA-205ENST00000507536 COX7A2LO14548 114 aa6.25□□□□□ -1.41
PDGFRA-205ENST00000507536 RAB4AP20338 218 aa6.25□□□□□ -1.41
PDGFRA-205ENST00000507536 PHF5AQ7RTV0 110 aaKnown RBP6.25□□□□□ -1.41
PDGFRA-205ENST00000507536 AMN1Q8IY45 258 aa6.25□□□□□ -1.41
PDGFRA-205ENST00000507536 NRACQ8N912 160 aa6.25□□□□□ -1.41
PDGFRA-205ENST00000507536 CSDC2Q9Y534 153 aaKnown RBP6.25□□□□□ -1.41
PDGFRA-205ENST00000507536 A0A1B0GUT8 65 aa6.24□□□□□ -1.41
PDGFRA-205ENST00000507536 HIGD1CA8MV81 97 aa6.24□□□□□ -1.41
PDGFRA-205ENST00000507536 C1orf196B1AJZ1 125 aa6.24□□□□□ -1.41
PDGFRA-205ENST00000507536 MT-ND6P03923 174 aa6.24□□□□□ -1.41
PDGFRA-205ENST00000507536 Q6ZUT4 128 aa6.24□□□□□ -1.41
PDGFRA-205ENST00000507536 TCTE3Q8IZS6 198 aa6.24□□□□□ -1.41
PDGFRA-205ENST00000507536 ISOC2Q96AB3 205 aa6.24□□□□□ -1.41
PDGFRA-205ENST00000507536 C2orf48Q96LS8 159 aa6.24□□□□□ -1.41
PDGFRA-205ENST00000507536 CAMK2N2Q96S95 79 aa6.24□□□□□ -1.41
PDGFRA-205ENST00000507536 OPRPNQ99935 248 aaPredicted RBP6.24□□□□□ -1.41
PDGFRA-205ENST00000507536 MALP21145 153 aa6.23□□□□□ -1.41
PDGFRA-205ENST00000507536 CTAG1AP78358 180 aa6.23□□□□□ -1.41
PDGFRA-205ENST00000507536 BLOC1S1P78537 153 aa6.23□□□□□ -1.41
PDGFRA-205ENST00000507536 RPL18AQ02543 176 aaKnown RBP6.23□□□□□ -1.41
PDGFRA-205ENST00000507536 C1orf137Q5JT78 98 aa6.23□□□□□ -1.41
PDGFRA-205ENST00000507536 C5orf38Q86SI9 138 aa6.23□□□□□ -1.41
PDGFRA-205ENST00000507536 LINC01551Q86U37 167 aa6.23□□□□□ -1.41
PDGFRA-205ENST00000507536 KRTAP7-1Q8IUC3 87 aa6.23□□□□□ -1.41
PDGFRA-205ENST00000507536 PRR26Q8N8Z3 221 aa6.23□□□□□ -1.41
PDGFRA-205ENST00000507536 TSKUQ8WUA8 353 aa6.23□□□□□ -1.41
PDGFRA-205ENST00000507536 TRAV13-1A0A0B4J241 112 aa6.22□□□□□ -1.41
PDGFRA-205ENST00000507536 FAM168BA1KXE4 195 aa6.22□□□□□ -1.41
PDGFRA-205ENST00000507536 KRTAP1-4P0C5Y4 121 aa6.22□□□□□ -1.41
PDGFRA-205ENST00000507536 SPAG11BQ08648 103 aa6.22□□□□□ -1.41
PDGFRA-205ENST00000507536 VCYO14598 125 aa6.21□□□□□ -1.42
PDGFRA-205ENST00000507536 IGLV7-43P04211 117 aa6.21□□□□□ -1.42
PDGFRA-205ENST00000507536 SUMO2P61956 95 aaKnown RBP6.21□□□□□ -1.42
PDGFRA-205ENST00000507536 C10orf25Q5T742 122 aa6.21□□□□□ -1.42
PDGFRA-205ENST00000507536 TIMM21Q9BVV7 248 aa6.21□□□□□ -1.42
PDGFRA-205ENST00000507536 IGHV3OR16-9A0A0B4J2B5 98 aa6.2□□□□□ -1.42
PDGFRA-205ENST00000507536 H0Y9J4 135 aa6.2□□□□□ -1.42
PDGFRA-205ENST00000507536 FCER1GP30273 86 aa6.2□□□□□ -1.42
PDGFRA-205ENST00000507536 RPL39P62891 51 aaKnown RBP6.2□□□□□ -1.42
PDGFRA-205ENST00000507536 ALKAL2Q6UX46 152 aa6.2□□□□□ -1.42
PDGFRA-205ENST00000507536 OR10D4PQ8NGN7 298 aa6.2□□□□□ -1.42
PDGFRA-205ENST00000507536 DIRC1Q969H9 104 aa6.2□□□□□ -1.42
PDGFRA-205ENST00000507536 BORCS7Q96B45 105 aa6.2□□□□□ -1.42
PDGFRA-205ENST00000507536 SMIM7Q9BQ49 75 aa6.2□□□□□ -1.42
PDGFRA-205ENST00000507536 OSTCQ9NRP0 149 aa6.2□□□□□ -1.42
PDGFRA-205ENST00000507536 MRPL35Q9NZE8 188 aaKnown RBP6.2□□□□□ -1.42
PDGFRA-205ENST00000507536 V9GYV3 84 aa6.2□□□□□ -1.42
PDGFRA-205ENST00000507536 TLX1NBP0CAT3 122 aa6.19□□□□□ -1.42
PDGFRA-205ENST00000507536 CEBPGP53567 150 aa6.19□□□□□ -1.42
PDGFRA-205ENST00000507536 MRPL51Q4U2R6 128 aaKnown RBP6.19□□□□□ -1.42
PDGFRA-205ENST00000507536 ORAOV1Q8WV07 137 aa6.18□□□□□ -1.42
PDGFRA-205ENST00000507536 KIR2DL4Q99706 377 aa6.18□□□□□ -1.42
PDGFRA-205ENST00000507536 C6orf48Q9UBA6 75 aa6.18□□□□□ -1.42
PDGFRA-205ENST00000507536 TRBV24-1A0A075B6N3 115 aa6.17□□□□□ -1.42
PDGFRA-205ENST00000507536 A0A087WZ39 114 aa6.17□□□□□ -1.42
PDGFRA-205ENST00000507536 SRP19P09132 144 aaKnown RBP6.17□□□□□ -1.42
PDGFRA-205ENST00000507536 RPL32P62910 135 aaKnown RBP6.17□□□□□ -1.42
PDGFRA-205ENST00000507536 RIGQ13278 110 aa6.17□□□□□ -1.42
PDGFRA-205ENST00000507536 KIAA0087Q14695 138 aa6.17□□□□□ -1.42
PDGFRA-205ENST00000507536 FAM104BQ5XKR9 115 aa6.17□□□□□ -1.42
PDGFRA-205ENST00000507536 UNQ6190/PRO20217Q6UXQ8 127 aa6.17□□□□□ -1.42
PDGFRA-205ENST00000507536 FAM19A5Q7Z5A7 132 aaPredicted RBP6.17□□□□□ -1.42
PDGFRA-205ENST00000507536 SMDT1Q9H4I9 107 aa6.17□□□□□ -1.42
PDGFRA-205ENST00000507536 IGLV1-50A0A075B6I6 118 aa6.16□□□□□ -1.42
PDGFRA-205ENST00000507536 ZNF727A8MUV8 499 aa6.16□□□□□ -1.42
PDGFRA-205ENST00000507536 F8WDY8 70 aa6.16□□□□□ -1.42
PDGFRA-205ENST00000507536 PPP1R2P9O14990 202 aa6.16□□□□□ -1.42
PDGFRA-205ENST00000507536 NDUFA1O15239 70 aa6.16□□□□□ -1.42
PDGFRA-205ENST00000507536 PPP1R17O96001 155 aa6.16□□□□□ -1.42
PDGFRA-205ENST00000507536 SMAGPQ0VAQ4 97 aa6.16□□□□□ -1.42
PDGFRA-205ENST00000507536 LINC00862A6NCI5 91 aa6.15□□□□□ -1.42
PDGFRA-205ENST00000507536 S100A12P80511 92 aa6.15□□□□□ -1.42
PDGFRA-205ENST00000507536 MRPS36P82909 103 aaKnown RBP6.15□□□□□ -1.42
PDGFRA-205ENST00000507536 IMMP2LQ96T52 175 aa6.15□□□□□ -1.42
PDGFRA-205ENST00000507536 C20orf78Q9BR46 151 aa6.15□□□□□ -1.42
PDGFRA-205ENST00000507536 SMIM2Q9BVW6 85 aa6.15□□□□□ -1.42
PDGFRA-205ENST00000507536 KRTAP9-8Q9BYQ0 159 aa6.15□□□□□ -1.42
PDGFRA-205ENST00000507536 SMIM27A0A1W2PRY6 76 aa6.14□□□□□ -1.43
PDGFRA-205ENST00000507536 M0QXV9 152 aa6.14□□□□□ -1.43
PDGFRA-205ENST00000507536 TNFRSF6BO95407 300 aa6.14□□□□□ -1.43
PDGFRA-205ENST00000507536 RPL23P62829 140 aaKnown RBP6.14□□□□□ -1.43
PDGFRA-205ENST00000507536 GAGE2EQ4V326 116 aa6.14□□□□□ -1.43
PDGFRA-205ENST00000507536 FAM74A3Q4VXF1 159 aa6.14□□□□□ -1.43
PDGFRA-205ENST00000507536 C9orf129Q5T035 196 aaKnown RBP6.14□□□□□ -1.43
PDGFRA-205ENST00000507536 TMEM18Q96B42 140 aa6.14□□□□□ -1.43
PDGFRA-205ENST00000507536 EIF5A2Q9GZV4 153 aaKnown RBP6.14□□□□□ -1.43
PDGFRA-205ENST00000507536 SPANXA1Q9NS26 97 aa6.14□□□□□ -1.43
PDGFRA-205ENST00000507536 GAGE2DQ9UEU5 116 aa6.14□□□□□ -1.43
PDGFRA-205ENST00000507536 NAT8BQ9UHF3 227 aa6.14□□□□□ -1.43
PDGFRA-205ENST00000507536 IFITM10A6NMD0 228 aa6.13□□□□□ -1.43
PDGFRA-205ENST00000507536 PRSS47A8MTI9 375 aa6.13□□□□□ -1.43
PDGFRA-205ENST00000507536 C9JQL5 133 aa6.13□□□□□ -1.43
PDGFRA-205ENST00000507536 NPYP01303 97 aa6.13□□□□□ -1.43
PDGFRA-205ENST00000507536 TMEM241Q24JQ0 296 aa6.13□□□□□ -1.43
PDGFRA-205ENST00000507536 C2orf82Q6UX34 121 aa6.13□□□□□ -1.43
PDGFRA-205ENST00000507536 FAT4Q6V0I7 4981 aa6.13□□□□□ -1.43
PDGFRA-205ENST00000507536 D6R8Y8 96 aa6.12□□□□□ -1.43
PDGFRA-205ENST00000507536 TCAPO15273 167 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms