RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 RHEBQ15382 184 aa9.88□□□□□ -0.83
MED28-204ENST00000506409 KIAA1644Q3SXP7 199 aa9.88□□□□□ -0.83
MED28-204ENST00000506409 ORMDL2Q53FV1 153 aa9.88□□□□□ -0.83
MED28-204ENST00000506409 NXT2Q9NPJ8 142 aaKnown RBP9.88□□□□□ -0.83
MED28-204ENST00000506409 CYSLTR1Q9Y271 337 aa9.88□□□□□ -0.83
MED28-204ENST00000506409 PKIGQ9Y2B9 76 aa9.88□□□□□ -0.83
MED28-204ENST00000506409 MAJINQ3KP22 176 aa9.87□□□□□ -0.83
MED28-204ENST00000506409 C2orf66Q6UXQ4 117 aa9.87□□□□□ -0.83
MED28-204ENST00000506409 TMEM141Q96I45 108 aa9.87□□□□□ -0.83
MED28-204ENST00000506409 RPS10P5Q9NQ39 176 aa9.87□□□□□ -0.83
MED28-204ENST00000506409 MYCBP2O75592 4640 aa9.86□□□□□ -0.83
MED28-204ENST00000506409 A0A096LNI7 61 aa9.86□□□□□ -0.83
MED28-204ENST00000506409 IGHV3OR16-9A0A0B4J2B5 98 aa9.86□□□□□ -0.83
MED28-204ENST00000506409 CAMK2N2Q96S95 79 aa9.86□□□□□ -0.83
MED28-204ENST00000506409 GNB1LQ9BYB4 327 aa9.86□□□□□ -0.83
MED28-204ENST00000506409 PLAC8Q9NZF1 115 aa9.86□□□□□ -0.83
MED28-204ENST00000506409 DMBT1Q9UGM3 2413 aaPredicted RBP9.86□□□□□ -0.83
MED28-204ENST00000506409 SPAG11BQ08648 103 aa9.85□□□□□ -0.83
MED28-204ENST00000506409 Q6ZN92 141 aa9.85□□□□□ -0.83
MED28-204ENST00000506409 TEX43Q6ZNM6 134 aa9.85□□□□□ -0.83
MED28-204ENST00000506409 Q6ZRU5 148 aa9.85□□□□□ -0.83
MED28-204ENST00000506409 OR10D4PQ8NGN7 298 aa9.85□□□□□ -0.83
MED28-204ENST00000506409 LINC00474Q9P2X8 69 aa9.85□□□□□ -0.83
MED28-204ENST00000506409 TGIF2-C20orf24A0A0A6YYL0 155 aa9.84□□□□□ -0.83
MED28-204ENST00000506409 COX19Q49B96 90 aa9.84□□□□□ -0.83
MED28-204ENST00000506409 ORAOV1Q8WV07 137 aa9.84□□□□□ -0.83
MED28-204ENST00000506409 C2orf48Q96LS8 159 aa9.84□□□□□ -0.83
MED28-204ENST00000506409 C2orf88Q9BSF0 95 aa9.84□□□□□ -0.83
MED28-204ENST00000506409 G0S2P27469 103 aa9.83□□□□□ -0.84
MED28-204ENST00000506409 STPG4Q8N801 248 aa9.83□□□□□ -0.84
MED28-204ENST00000506409 MT-ND6P03923 174 aa9.82□□□□□ -0.84
MED28-204ENST00000506409 NPSP0C0P6 89 aa9.82□□□□□ -0.84
MED28-204ENST00000506409 LINC00242Q5T6M2 205 aa9.82□□□□□ -0.84
MED28-204ENST00000506409 VCX2Q9H322 139 aa9.82□□□□□ -0.84
MED28-204ENST00000506409 LOC107984640A0A0U1RRK4 108 aa9.81□□□□□ -0.84
MED28-204ENST00000506409 IGIPA6NJ69 53 aa9.81□□□□□ -0.84
MED28-204ENST00000506409 APOC3P02656 99 aa9.81□□□□□ -0.84
MED28-204ENST00000506409 UBE2D1P51668 147 aa9.81□□□□□ -0.84
MED28-204ENST00000506409 ZC2HC1BQ5TFG8 222 aa9.81□□□□□ -0.84
MED28-204ENST00000506409 LINC00173Q6ZV60 143 aa9.81□□□□□ -0.84
MED28-204ENST00000506409 C7orf33Q8WU49 177 aa9.81□□□□□ -0.84
MED28-204ENST00000506409 AMELXQ99217 191 aa9.81□□□□□ -0.84
MED28-204ENST00000506409 ALKBH7Q9BT30 221 aaPredicted RBP9.81□□□□□ -0.84
MED28-204ENST00000506409 A0A087WZ39 114 aa9.8□□□□□ -0.84
MED28-204ENST00000506409 J3QL48 77 aa9.8□□□□□ -0.84
MED28-204ENST00000506409 FABP9Q0Z7S8 132 aa9.8□□□□□ -0.84
MED28-204ENST00000506409 NDUFA5Q16718 116 aa9.8□□□□□ -0.84
MED28-204ENST00000506409 PAPPA-AS1Q5QFB9 102 aa9.8□□□□□ -0.84
MED28-204ENST00000506409 MRPL18Q9H0U6 180 aaKnown RBP9.8□□□□□ -0.84
MED28-204ENST00000506409 F8WDY8 70 aa9.79□□□□□ -0.84
MED28-204ENST00000506409 PTTG1IPP53801 180 aa9.79□□□□□ -0.84
MED28-204ENST00000506409 GAGE2BQ13066 116 aa9.79□□□□□ -0.84
MED28-204ENST00000506409 TOMM6Q96B49 74 aa9.79□□□□□ -0.84
MED28-204ENST00000506409 TIMM17AQ99595 171 aa9.79□□□□□ -0.84
MED28-204ENST00000506409 KRTAP29-1A8MX34 341 aaPredicted RBP9.78□□□□□ -0.84
MED28-204ENST00000506409 NDUFA1O15239 70 aa9.78□□□□□ -0.84
MED28-204ENST00000506409 SNAPINO95295 136 aa9.78□□□□□ -0.84
MED28-204ENST00000506409 SVBPQ8N300 66 aa9.78□□□□□ -0.84
MED28-204ENST00000506409 MRPL35Q9NZE8 188 aaKnown RBP9.78□□□□□ -0.84
MED28-204ENST00000506409 A0A0J9YXV3 536 aa9.77□□□□□ -0.85
MED28-204ENST00000506409 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.77□□□□□ -0.85
MED28-204ENST00000506409 HNRNPA3P51991 378 aaKnown RBP9.77□□□□□ -0.85
MED28-204ENST00000506409 RPL18AQ02543 176 aaKnown RBP9.77□□□□□ -0.85
MED28-204ENST00000506409 RNF151Q2KHN1 245 aa9.77□□□□□ -0.85
MED28-204ENST00000506409 ERASQ7Z444 233 aa9.77□□□□□ -0.85
MED28-204ENST00000506409 SCGB3A1Q96QR1 104 aa9.77□□□□□ -0.85
MED28-204ENST00000506409 LINC01546A6NGU7 62 aa9.76□□□□□ -0.85
MED28-204ENST00000506409 FA2HQ7L5A8 372 aa9.76□□□□□ -0.85
MED28-204ENST00000506409 LINC01549A6NIU2 74 aa9.75□□□□□ -0.85
MED28-204ENST00000506409 SEC11AP67812 179 aa9.75□□□□□ -0.85
MED28-204ENST00000506409 LINC01561Q8N1V8 128 aa9.75□□□□□ -0.85
MED28-204ENST00000506409 SMCO4Q9NRQ5 59 aa9.75□□□□□ -0.85
MED28-204ENST00000506409 TRAPPC1Q9Y5R8 145 aa9.75□□□□□ -0.85
MED28-204ENST00000506409 HERC1Q15751 4861 aa9.74□□□□□ -0.85
MED28-204ENST00000506409 KIAA0087Q14695 138 aa9.74□□□□□ -0.85
MED28-204ENST00000506409 C10orf25Q5T742 122 aa9.74□□□□□ -0.85
MED28-204ENST00000506409 UNQ6190/PRO20217Q6UXQ8 127 aa9.74□□□□□ -0.85
MED28-204ENST00000506409 FAM19A3Q7Z5A8 133 aa9.74□□□□□ -0.85
MED28-204ENST00000506409 OXTP01178 125 aa9.73□□□□□ -0.85
MED28-204ENST00000506409 HERVK_113P63121 156 aa9.73□□□□□ -0.85
MED28-204ENST00000506409 GEMIN7Q9H840 131 aaKnown RBP9.73□□□□□ -0.85
MED28-204ENST00000506409 C6orf48Q9UBA6 75 aa9.73□□□□□ -0.85
MED28-204ENST00000506409 A0A1W2PNN7 141 aa9.71□□□□□ -0.86
MED28-204ENST00000506409 PRSS2P07478 247 aa9.71□□□□□ -0.86
MED28-204ENST00000506409 PRR3P79522 188 aaKnown RBP9.71□□□□□ -0.86
MED28-204ENST00000506409 C9orf116Q5BN46 136 aaPredicted RBP9.71□□□□□ -0.86
MED28-204ENST00000506409 C2orf82Q6UX34 121 aa9.71□□□□□ -0.86
MED28-204ENST00000506409 PACRGQ96M98 296 aaPredicted RBP9.71□□□□□ -0.86
MED28-204ENST00000506409 TOMM7Q9P0U1 55 aa9.71□□□□□ -0.86
MED28-204ENST00000506409 CDKN2A-AS1Q9UH64 79 aa9.71□□□□□ -0.86
MED28-204ENST00000506409 TRBV30A0A0K0K1B3 111 aa9.7□□□□□ -0.86
MED28-204ENST00000506409 TLX1NBP0CAT3 122 aa9.7□□□□□ -0.86
MED28-204ENST00000506409 C18orf32Q8TCD1 76 aa9.7□□□□□ -0.86
MED28-204ENST00000506409 LRP1Q07954 4544 aaKnown RBP9.69□□□□□ -0.86
MED28-204ENST00000506409 CKS1BP61024 79 aa9.69□□□□□ -0.86
MED28-204ENST00000506409 Q6ZRP5 223 aa9.69□□□□□ -0.86
MED28-204ENST00000506409 LINC00469Q8N7U9 141 aa9.69□□□□□ -0.86
MED28-204ENST00000506409 LINC00614P0C842 121 aa9.68□□□□□ -0.86
MED28-204ENST00000506409 C6orf226Q5I0X4 101 aa9.68□□□□□ -0.86
MED28-204ENST00000506409 Q8IZM0 81 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms