RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 RPL39P62891 51 aaKnown RBP12.36□□□□□ -0.43
UBE2D3-220ENST00000505307 TNXBP22105 4242 aa12.35□□□□□ -0.43
UBE2D3-220ENST00000505307 IGHV3OR16-9A0A0B4J2B5 98 aa12.35□□□□□ -0.43
UBE2D3-220ENST00000505307 A0A1B0GXF2 115 aa12.35□□□□□ -0.43
UBE2D3-220ENST00000505307 A0A1W2PNN7 141 aa12.35□□□□□ -0.43
UBE2D3-220ENST00000505307 SRSF3P84103 164 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-220ENST00000505307 RPL18AQ02543 176 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-220ENST00000505307 MRPL54Q6P161 138 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-220ENST00000505307 KRTAP10-8P60410 259 aa12.34□□□□□ -0.43
UBE2D3-220ENST00000505307 C9orf116Q5BN46 136 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-220ENST00000505307 IMMP2LQ96T52 175 aa12.34□□□□□ -0.43
UBE2D3-220ENST00000505307 MRPL35Q9NZE8 188 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-220ENST00000505307 NPYP01303 97 aa12.33□□□□□ -0.44
UBE2D3-220ENST00000505307 ATP5L2Q7Z4Y8 100 aa12.33□□□□□ -0.44
UBE2D3-220ENST00000505307 ORAOV1Q8WV07 137 aa12.33□□□□□ -0.44
UBE2D3-220ENST00000505307 FAM104AQ969W3 186 aa12.33□□□□□ -0.44
UBE2D3-220ENST00000505307 IFITM10A6NMD0 228 aa12.32□□□□□ -0.44
UBE2D3-220ENST00000505307 RAB5AP20339 215 aa12.32□□□□□ -0.44
UBE2D3-220ENST00000505307 ORMDL3Q8N138 153 aa12.32□□□□□ -0.44
UBE2D3-220ENST00000505307 A0A1B0GVG6 124 aa12.31□□□□□ -0.44
UBE2D3-220ENST00000505307 NDUFA1O15239 70 aa12.31□□□□□ -0.44
UBE2D3-220ENST00000505307 OPRPNQ99935 248 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-220ENST00000505307 MT-ND6P03923 174 aa12.3□□□□□ -0.44
UBE2D3-220ENST00000505307 IFI27P40305 119 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-220ENST00000505307 ODF1Q14990 250 aa12.3□□□□□ -0.44
UBE2D3-220ENST00000505307 TMEM136Q6ZRR5 245 aa12.3□□□□□ -0.44
UBE2D3-220ENST00000505307 PYGO1Q9Y3Y4 419 aa12.3□□□□□ -0.44
UBE2D3-220ENST00000505307 TGIF2-C20orf24A0A0A6YYL0 155 aa12.29□□□□□ -0.44
UBE2D3-220ENST00000505307 PSORS1C2Q9UIG4 136 aa12.29□□□□□ -0.44
UBE2D3-220ENST00000505307 TLX1NBP0CAT3 122 aa12.28□□□□□ -0.44
UBE2D3-220ENST00000505307 PRELID3AQ96N28 172 aa12.28□□□□□ -0.44
UBE2D3-220ENST00000505307 LAMTOR2Q9Y2Q5 125 aa12.28□□□□□ -0.44
UBE2D3-220ENST00000505307 PRSS47A8MTI9 375 aa12.27□□□□□ -0.45
UBE2D3-220ENST00000505307 A0A087WZ39 114 aa12.26□□□□□ -0.45
UBE2D3-220ENST00000505307 LRP2P98164 4655 aa12.26□□□□□ -0.45
UBE2D3-220ENST00000505307 C1orf137Q5JT78 98 aa12.25□□□□□ -0.45
UBE2D3-220ENST00000505307 PHF5AQ7RTV0 110 aaKnown RBP12.25□□□□□ -0.45
UBE2D3-220ENST00000505307 TMEM141Q96I45 108 aa12.25□□□□□ -0.45
UBE2D3-220ENST00000505307 PNRC1Q12796 327 aaPredicted RBP12.24□□□□□ -0.45
UBE2D3-220ENST00000505307 UNQ6190/PRO20217Q6UXQ8 127 aa12.24□□□□□ -0.45
UBE2D3-220ENST00000505307 IGLV4-3A0A075B6K6 122 aa12.23□□□□□ -0.45
UBE2D3-220ENST00000505307 LINC00242Q5T6M2 205 aa12.23□□□□□ -0.45
UBE2D3-220ENST00000505307 C10orf25Q5T742 122 aa12.23□□□□□ -0.45
UBE2D3-220ENST00000505307 LINC01561Q8N1V8 128 aa12.23□□□□□ -0.45
UBE2D3-220ENST00000505307 MAP1LC3AQ9H492 121 aa12.23□□□□□ -0.45
UBE2D3-220ENST00000505307 C6orf48Q9UBA6 75 aa12.23□□□□□ -0.45
UBE2D3-220ENST00000505307 KIAA0087Q14695 138 aa12.22□□□□□ -0.45
UBE2D3-220ENST00000505307 TEX43Q6ZNM6 134 aa12.22□□□□□ -0.45
UBE2D3-220ENST00000505307 TRBV30A0A0K0K1B3 111 aa12.21□□□□□ -0.45
UBE2D3-220ENST00000505307 DIRC1Q969H9 104 aa12.21□□□□□ -0.45
UBE2D3-220ENST00000505307 ANAPC16Q96DE5 110 aa12.21□□□□□ -0.45
UBE2D3-220ENST00000505307 C2orf88Q9BSF0 95 aa12.21□□□□□ -0.45
UBE2D3-220ENST00000505307 MT-ND4LP03901 98 aa12.2□□□□□ -0.46
UBE2D3-220ENST00000505307 NPSP0C0P6 89 aa12.2□□□□□ -0.46
UBE2D3-220ENST00000505307 Q6ZN92 141 aa12.2□□□□□ -0.46
UBE2D3-220ENST00000505307 CYSLTR1Q9Y271 337 aa12.2□□□□□ -0.46
UBE2D3-220ENST00000505307 LOC389332A0A1B0GUA5 103 aa12.19□□□□□ -0.46
UBE2D3-220ENST00000505307 K7EMI3 77 aa12.19□□□□□ -0.46
UBE2D3-220ENST00000505307 IGLV7-43P04211 117 aa12.19□□□□□ -0.46
UBE2D3-220ENST00000505307 GAGE2EQ4V326 116 aa12.19□□□□□ -0.46
UBE2D3-220ENST00000505307 Q8N8P6 123 aa12.19□□□□□ -0.46
UBE2D3-220ENST00000505307 PACRGQ96M98 296 aaPredicted RBP12.19□□□□□ -0.46
UBE2D3-220ENST00000505307 GAGE2DQ9UEU5 116 aa12.19□□□□□ -0.46
UBE2D3-220ENST00000505307 RNF213Q63HN8 5207 aa12.18□□□□□ -0.46
UBE2D3-220ENST00000505307 UBE2D1P51668 147 aa12.18□□□□□ -0.46
UBE2D3-220ENST00000505307 ORMDL2Q53FV1 153 aa12.18□□□□□ -0.46
UBE2D3-220ENST00000505307 FAM168BA1KXE4 195 aa12.17□□□□□ -0.46
UBE2D3-220ENST00000505307 NDUFC2-KCTD14E9PQ53 114 aa12.17□□□□□ -0.46
UBE2D3-220ENST00000505307 C2orf66Q6UXQ4 117 aa12.17□□□□□ -0.46
UBE2D3-220ENST00000505307 FAM19A5Q7Z5A7 132 aaPredicted RBP12.17□□□□□ -0.46
UBE2D3-220ENST00000505307 VCX2Q9H322 139 aa12.17□□□□□ -0.46
UBE2D3-220ENST00000505307 AMELXQ99217 191 aa12.16□□□□□ -0.46
UBE2D3-220ENST00000505307 G0S2P27469 103 aa12.15□□□□□ -0.46
UBE2D3-220ENST00000505307 RAB14P61106 215 aa12.15□□□□□ -0.46
UBE2D3-220ENST00000505307 PAPPA-AS1Q5QFB9 102 aa12.14□□□□□ -0.47
UBE2D3-220ENST00000505307 C2orf82Q6UX34 121 aa12.14□□□□□ -0.47
UBE2D3-220ENST00000505307 NXT2Q9NPJ8 142 aaKnown RBP12.14□□□□□ -0.47
UBE2D3-220ENST00000505307 H0Y9J4 135 aa12.13□□□□□ -0.47
UBE2D3-220ENST00000505307 M0QXV9 152 aa12.13□□□□□ -0.47
UBE2D3-220ENST00000505307 PRSS2P07478 247 aa12.13□□□□□ -0.47
UBE2D3-220ENST00000505307 SEC11AP67812 179 aa12.13□□□□□ -0.47
UBE2D3-220ENST00000505307 LINC00173Q6ZV60 143 aa12.13□□□□□ -0.47
UBE2D3-220ENST00000505307 FAM19A3Q7Z5A8 133 aa12.13□□□□□ -0.47
UBE2D3-220ENST00000505307 IGIPA6NJ69 53 aa12.12□□□□□ -0.47
UBE2D3-220ENST00000505307 UBE2BP63146 152 aa12.12□□□□□ -0.47
UBE2D3-220ENST00000505307 CKS1BP61024 79 aa12.11□□□□□ -0.47
UBE2D3-220ENST00000505307 KRTAP11-1Q8IUC1 163 aa12.11□□□□□ -0.47
UBE2D3-220ENST00000505307 KRTAP7-1Q8IUC3 87 aa12.11□□□□□ -0.47
UBE2D3-220ENST00000505307 CTDSP1Q9GZU7 261 aa12.11□□□□□ -0.47
UBE2D3-220ENST00000505307 C6orf226Q5I0X4 101 aa12.1□□□□□ -0.47
UBE2D3-220ENST00000505307 Q8IZM0 81 aa12.1□□□□□ -0.47
UBE2D3-220ENST00000505307 IGLV1-50A0A075B6I6 118 aa12.09□□□□□ -0.47
UBE2D3-220ENST00000505307 HERVK_113P63121 156 aa12.09□□□□□ -0.47
UBE2D3-220ENST00000505307 C9orf129Q5T035 196 aaKnown RBP12.09□□□□□ -0.47
UBE2D3-220ENST00000505307 ZC2HC1BQ5TFG8 222 aa12.09□□□□□ -0.47
UBE2D3-220ENST00000505307 PRR26Q8N8Z3 221 aa12.09□□□□□ -0.47
UBE2D3-220ENST00000505307 TOMM7Q9P0U1 55 aa12.09□□□□□ -0.47
UBE2D3-220ENST00000505307 TIMM17AQ99595 171 aa12.08□□□□□ -0.48
UBE2D3-220ENST00000505307 ALKBH7Q9BT30 221 aaPredicted RBP12.08□□□□□ -0.48
UBE2D3-220ENST00000505307 GEMIN7Q9H840 131 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms