RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 HIST1H2BJP06899 126 aa11.91□□□□□ -0.5
DDR1-254ENST00000504679 HIST1H2BOP23527 126 aa11.91□□□□□ -0.5
DDR1-254ENST00000504679 HIST1H2BBP33778 126 aa11.91□□□□□ -0.5
DDR1-254ENST00000504679 HIST1H2BDP58876 126 aa11.91□□□□□ -0.5
DDR1-254ENST00000504679 HIST1H2BCP62807 126 aa11.91□□□□□ -0.5
DDR1-254ENST00000504679 PMVKQ15126 192 aa11.91□□□□□ -0.5
DDR1-254ENST00000504679 HIST2H2BEQ16778 126 aa11.91□□□□□ -0.5
DDR1-254ENST00000504679 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.91□□□□□ -0.5
DDR1-254ENST00000504679 C5orf38Q86SI9 138 aa11.91□□□□□ -0.5
DDR1-254ENST00000504679 HIST1H2BHQ93079 126 aa11.91□□□□□ -0.5
DDR1-254ENST00000504679 HIST1H2BNQ99877 126 aa11.91□□□□□ -0.5
DDR1-254ENST00000504679 HIST1H2BMQ99879 126 aa11.91□□□□□ -0.5
DDR1-254ENST00000504679 CST9LQ9H4G1 147 aa11.91□□□□□ -0.5
DDR1-254ENST00000504679 IGHV3OR16-9A0A0B4J2B5 98 aa11.9□□□□□ -0.5
DDR1-254ENST00000504679 APOMO95445 188 aa11.9□□□□□ -0.5
DDR1-254ENST00000504679 NDUFA6P56556 154 aa11.9□□□□□ -0.5
DDR1-254ENST00000504679 FAM19A3Q7Z5A8 133 aa11.9□□□□□ -0.5
DDR1-254ENST00000504679 FAM19A2Q8N3H0 131 aa11.9□□□□□ -0.5
DDR1-254ENST00000504679 C15orf56Q8N910 161 aa11.9□□□□□ -0.5
DDR1-254ENST00000504679 GCSHP23434 173 aa11.89□□□□□ -0.51
DDR1-254ENST00000504679 COX6A2Q02221 97 aa11.89□□□□□ -0.51
DDR1-254ENST00000504679 GEMIN7Q9H840 131 aaKnown RBP11.88□□□□□ -0.51
DDR1-254ENST00000504679 PKHD1P08F94 4074 aa11.88□□□□□ -0.51
DDR1-254ENST00000504679 LINC00310P59036 64 aa11.87□□□□□ -0.51
DDR1-254ENST00000504679 HERVK_113P63121 156 aa11.87□□□□□ -0.51
DDR1-254ENST00000504679 HIGD2BQ4VC39 106 aa11.87□□□□□ -0.51
DDR1-254ENST00000504679 A0A087WZ39 114 aa11.86□□□□□ -0.51
DDR1-254ENST00000504679 GVQW2A0A096LPI5 108 aaPredicted RBP11.86□□□□□ -0.51
DDR1-254ENST00000504679 A0A0J9YXV3 536 aa11.86□□□□□ -0.51
DDR1-254ENST00000504679 ZNF561-AS1K7EIQ3 104 aa11.86□□□□□ -0.51
DDR1-254ENST00000504679 NUPR1O60356 82 aa11.86□□□□□ -0.51
DDR1-254ENST00000504679 IFI27L1Q96BM0 104 aa11.86□□□□□ -0.51
DDR1-254ENST00000504679 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.85□□□□□ -0.51
DDR1-254ENST00000504679 TINCRA0A1B0GVN0 87 aa11.84□□□□□ -0.51
DDR1-254ENST00000504679 LEPROTL1O95214 131 aa11.84□□□□□ -0.51
DDR1-254ENST00000504679 CNBPP62633 177 aaKnown RBP11.84□□□□□ -0.51
DDR1-254ENST00000504679 LINC01561Q8N1V8 128 aa11.84□□□□□ -0.51
DDR1-254ENST00000504679 IGHV3-64A0A075B6Q5 118 aa11.83□□□□□ -0.52
DDR1-254ENST00000504679 OR10D4PQ8NGN7 298 aa11.83□□□□□ -0.52
DDR1-254ENST00000504679 C9orf163Q8N9P6 203 aa11.82□□□□□ -0.52
DDR1-254ENST00000504679 ORAOV1Q8WV07 137 aa11.82□□□□□ -0.52
DDR1-254ENST00000504679 CDKN2A-AS1Q9UH64 79 aa11.82□□□□□ -0.52
DDR1-254ENST00000504679 HSPB8Q9UJY1 196 aa11.82□□□□□ -0.52
DDR1-254ENST00000504679 SLPIP03973 132 aa11.81□□□□□ -0.52
DDR1-254ENST00000504679 FABP4P15090 132 aa11.81□□□□□ -0.52
DDR1-254ENST00000504679 KRTAP10-1P60331 282 aa11.81□□□□□ -0.52
DDR1-254ENST00000504679 LINC00526Q96FQ7 95 aa11.81□□□□□ -0.52
DDR1-254ENST00000504679 IGLV4-69A0A075B6H9 119 aa11.8□□□□□ -0.52
DDR1-254ENST00000504679 TRAV12-1A0A0B4J245 112 aa11.8□□□□□ -0.52
DDR1-254ENST00000504679 COA6Q5JTJ3 125 aaKnown RBP11.8□□□□□ -0.52
DDR1-254ENST00000504679 LINC00469Q8N7U9 141 aa11.8□□□□□ -0.52
DDR1-254ENST00000504679 PACRGQ96M98 296 aaPredicted RBP11.8□□□□□ -0.52
DDR1-254ENST00000504679 IGLC3P0DOY3 106 aa11.79□□□□□ -0.52
DDR1-254ENST00000504679 SPAG11BQ08648 103 aa11.79□□□□□ -0.52
DDR1-254ENST00000504679 LINC01620Q4KN68 170 aa11.79□□□□□ -0.52
DDR1-254ENST00000504679 C2orf48Q96LS8 159 aa11.79□□□□□ -0.52
DDR1-254ENST00000504679 CHTOPQ9Y3Y2 248 aaKnown RBP11.79□□□□□ -0.52
DDR1-254ENST00000504679 F8WDY8 70 aa11.78□□□□□ -0.52
DDR1-254ENST00000504679 SYCNQ0VAF6 134 aa11.78□□□□□ -0.52
DDR1-254ENST00000504679 DYNC1H1Q14204 4646 aaKnown RBP11.78□□□□□ -0.52
DDR1-254ENST00000504679 DNAH5Q8TE73 4624 aa11.77□□□□□ -0.52
DDR1-254ENST00000504679 IGLV5-45A0A087WSX0 123 aa11.77□□□□□ -0.53
DDR1-254ENST00000504679 H3BRM9 83 aa11.77□□□□□ -0.53
DDR1-254ENST00000504679 CAMK2N2Q96S95 79 aa11.77□□□□□ -0.53
DDR1-254ENST00000504679 CHAC1Q9BUX1 264 aa11.77□□□□□ -0.53
DDR1-254ENST00000504679 MAP1LC3CQ9BXW4 147 aa11.76□□□□□ -0.53
DDR1-254ENST00000504679 H0Y8G0 127 aa11.75□□□□□ -0.53
DDR1-254ENST00000504679 PRSS2P07478 247 aa11.75□□□□□ -0.53
DDR1-254ENST00000504679 C6orf226Q5I0X4 101 aa11.75□□□□□ -0.53
DDR1-254ENST00000504679 CARD19Q96LW7 228 aa11.75□□□□□ -0.53
DDR1-254ENST00000504679 F8VRH5 84 aa11.74□□□□□ -0.53
DDR1-254ENST00000504679 KIAA0087Q14695 138 aa11.74□□□□□ -0.53
DDR1-254ENST00000504679 SDIM1Q6ZPB5 146 aa11.74□□□□□ -0.53
DDR1-254ENST00000504679 TOMM7Q9P0U1 55 aa11.74□□□□□ -0.53
DDR1-254ENST00000504679 NDUFA1O15239 70 aa11.73□□□□□ -0.53
DDR1-254ENST00000504679 Q6ZRU5 148 aa11.73□□□□□ -0.53
DDR1-254ENST00000504679 MRPL35Q9NZE8 188 aaKnown RBP11.73□□□□□ -0.53
DDR1-254ENST00000504679 BIRC6Q9NR09 4857 aa11.72□□□□□ -0.53
DDR1-254ENST00000504679 C11orf86A6NJI1 115 aa11.72□□□□□ -0.53
DDR1-254ENST00000504679 CDK2AP2O75956 126 aa11.72□□□□□ -0.53
DDR1-254ENST00000504679 SPINK8P0C7L1 97 aa11.72□□□□□ -0.53
DDR1-254ENST00000504679 ZNF22P17026 224 aaPredicted RBP11.72□□□□□ -0.53
DDR1-254ENST00000504679 TMEM170BQ5T4T1 132 aa11.72□□□□□ -0.53
DDR1-254ENST00000504679 Q8IZM0 81 aa11.72□□□□□ -0.53
DDR1-254ENST00000504679 PKIGQ9Y2B9 76 aa11.72□□□□□ -0.53
DDR1-254ENST00000504679 LRP1BQ9NZR2 4599 aa11.71□□□□□ -0.53
DDR1-254ENST00000504679 SMIM1B2RUZ4 78 aa11.71□□□□□ -0.53
DDR1-254ENST00000504679 S100A6P06703 90 aa11.71□□□□□ -0.53
DDR1-254ENST00000504679 CKS1BP61024 79 aa11.71□□□□□ -0.53
DDR1-254ENST00000504679 ODF1Q14990 250 aa11.71□□□□□ -0.53
DDR1-254ENST00000504679 RNF151Q2KHN1 245 aa11.71□□□□□ -0.53
DDR1-254ENST00000504679 UNQ6190/PRO20217Q6UXQ8 127 aa11.7□□□□□ -0.54
DDR1-254ENST00000504679 FAM30AQ9NZY2 134 aa11.7□□□□□ -0.54
DDR1-254ENST00000504679 COX7B2Q8TF08 81 aa11.69□□□□□ -0.54
DDR1-254ENST00000504679 DPH3Q96FX2 82 aa11.69□□□□□ -0.54
DDR1-254ENST00000504679 Q6ZSA8 131 aa11.68□□□□□ -0.54
DDR1-254ENST00000504679 LOC107984640A0A0U1RRK4 108 aa11.67□□□□□ -0.54
DDR1-254ENST00000504679 SYS1-DBNDD2H3BUS1 97 aa11.67□□□□□ -0.54
DDR1-254ENST00000504679 PLNP26678 52 aa11.67□□□□□ -0.54
DDR1-254ENST00000504679 C10orf25Q5T742 122 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms