RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 APC2O95996 2303 aa4.41□□□□□ -1.7
LINC02397-201ENST00000504409 FAM19A4Q96LR4 140 aa4.41□□□□□ -1.7
LINC02397-201ENST00000504409 H0Y9J4 135 aa4.41□□□□□ -1.7
LINC02397-201ENST00000504409 LINC01548A6NM66 108 aa4.4□□□□□ -1.7
LINC02397-201ENST00000504409 IGHV4-31P0DP07 118 aa4.4□□□□□ -1.7
LINC02397-201ENST00000504409 LINC00242Q5T6M2 205 aa4.4□□□□□ -1.7
LINC02397-201ENST00000504409 TRBV7-4A0A0J9YYF1 115 aa4.4□□□□□ -1.71
LINC02397-201ENST00000504409 NOP10Q9NPE3 64 aaKnown RBP4.4□□□□□ -1.71
LINC02397-201ENST00000504409 ZNF503-AS2A6NEH8 195 aa4.4□□□□□ -1.71
LINC02397-201ENST00000504409 AVPP01185 164 aa4.4□□□□□ -1.71
LINC02397-201ENST00000504409 C9orf116Q5BN46 136 aaPredicted RBP4.4□□□□□ -1.71
LINC02397-201ENST00000504409 GVQW2A0A096LPI5 108 aaPredicted RBP4.39□□□□□ -1.71
LINC02397-201ENST00000504409 LINC00205P59089 165 aa4.39□□□□□ -1.71
LINC02397-201ENST00000504409 IL17DQ8TAD2 202 aa4.39□□□□□ -1.71
LINC02397-201ENST00000504409 CHCHD10Q8WYQ3 142 aaPredicted RBP4.39□□□□□ -1.71
LINC02397-201ENST00000504409 PKDREJQ9NTG1 2253 aa4.39□□□□□ -1.71
LINC02397-201ENST00000504409 SPTBN2O15020 2390 aa4.39□□□□□ -1.71
LINC02397-201ENST00000504409 IGHV3OR16-8A0A075B7F1 116 aa4.39□□□□□ -1.71
LINC02397-201ENST00000504409 UQCR11O14957 56 aa4.39□□□□□ -1.71
LINC02397-201ENST00000504409 FHL2Q14192 279 aa4.39□□□□□ -1.71
LINC02397-201ENST00000504409 DAZAP2Q15038 168 aaPredicted RBP4.39□□□□□ -1.71
LINC02397-201ENST00000504409 LELP1Q5T871 98 aa4.39□□□□□ -1.71
LINC02397-201ENST00000504409 C1orf137Q5JT78 98 aa4.38□□□□□ -1.71
LINC02397-201ENST00000504409 LINC00336Q6ZUF6 198 aa4.38□□□□□ -1.71
LINC02397-201ENST00000504409 ZNRD1Q9P1U0 126 aa4.38□□□□□ -1.71
LINC02397-201ENST00000504409 IGHV4-28A0A0C4DH34 117 aa4.38□□□□□ -1.71
LINC02397-201ENST00000504409 PRAC2D3DTV9 90 aa4.38□□□□□ -1.71
LINC02397-201ENST00000504409 Q75L30 129 aa4.38□□□□□ -1.71
LINC02397-201ENST00000504409 Q8N2B8 174 aa4.38□□□□□ -1.71
LINC02397-201ENST00000504409 TNFRSF13BO14836 293 aaPredicted RBP4.38□□□□□ -1.71
LINC02397-201ENST00000504409 C4orf48Q5BLP8 95 aa4.38□□□□□ -1.71
LINC02397-201ENST00000504409 DEFB124Q8NES8 71 aa4.38□□□□□ -1.71
LINC02397-201ENST00000504409 TRAV22A0A0B4J277 110 aa4.38□□□□□ -1.71
LINC02397-201ENST00000504409 IGFL4Q6B9Z1 124 aa4.37□□□□□ -1.71
LINC02397-201ENST00000504409 Q96MF0 132 aa4.37□□□□□ -1.71
LINC02397-201ENST00000504409 A0A087WYN8 130 aa4.37□□□□□ -1.71
LINC02397-201ENST00000504409 Q6ZTC4 211 aa4.37□□□□□ -1.71
LINC02397-201ENST00000504409 PTPRZ1P23471 2315 aaPredicted RBP4.37□□□□□ -1.71
LINC02397-201ENST00000504409 DEFB130BP0DP73 79 aa4.37□□□□□ -1.71
LINC02397-201ENST00000504409 DEFB130AP0DP74 79 aa4.37□□□□□ -1.71
LINC02397-201ENST00000504409 CDSNQ15517 529 aa4.37□□□□□ -1.71
LINC02397-201ENST00000504409 KPRPQ5T749 579 aaPredicted RBP4.37□□□□□ -1.71
LINC02397-201ENST00000504409 MAP6D1Q9H9H5 199 aa4.37□□□□□ -1.71
LINC02397-201ENST00000504409 TRIOBPQ9H2D6 2365 aa4.37□□□□□ -1.71
LINC02397-201ENST00000504409 CACNA1HO95180 2353 aa4.37□□□□□ -1.71
LINC02397-201ENST00000504409 IGHV3-38A0A0C4DH36 116 aa4.36□□□□□ -1.71
LINC02397-201ENST00000504409 TM2D3Q9BRN9 247 aa4.36□□□□□ -1.71
LINC02397-201ENST00000504409 TSPEAR-AS2P59090 65 aa4.36□□□□□ -1.71
LINC02397-201ENST00000504409 NANOS2P60321 138 aaKnown RBP4.36□□□□□ -1.71
LINC02397-201ENST00000504409 ZNF702PQ9H963 129 aa4.36□□□□□ -1.71
LINC02397-201ENST00000504409 E7EUB6 86 aa4.36□□□□□ -1.71
LINC02397-201ENST00000504409 G3V318 75 aa4.36□□□□□ -1.71
LINC02397-201ENST00000504409 PSPHP1O15172 72 aa4.36□□□□□ -1.71
LINC02397-201ENST00000504409 SPINK2P20155 84 aa4.36□□□□□ -1.71
LINC02397-201ENST00000504409 IGLV1-40P01703 118 aa4.36□□□□□ -1.71
LINC02397-201ENST00000504409 A0A1B0GU69 56 aa4.35□□□□□ -1.71
LINC02397-201ENST00000504409 LINC00959A0A1B0GUT2 108 aa4.35□□□□□ -1.71
LINC02397-201ENST00000504409 ADAMTSL4-AS1Q5T5F5 129 aa4.35□□□□□ -1.71
LINC02397-201ENST00000504409 SEM1Q6ZVN7 128 aa4.35□□□□□ -1.71
LINC02397-201ENST00000504409 KIF25-AS1Q9Y6Z4 181 aa4.35□□□□□ -1.71
LINC02397-201ENST00000504409 ROS1P08922 2347 aa4.35□□□□□ -1.71
LINC02397-201ENST00000504409 C10orf142B7Z368 130 aa4.35□□□□□ -1.71
LINC02397-201ENST00000504409 RNASE13Q5GAN3 156 aaKnown RBP4.35□□□□□ -1.71
LINC02397-201ENST00000504409 A6NDX4 124 aa4.35□□□□□ -1.71
LINC02397-201ENST00000504409 UBE2DNLQ8IWF7 75 aa4.35□□□□□ -1.71
LINC02397-201ENST00000504409 FAM215AQ9Y5M1 114 aa4.35□□□□□ -1.71
LINC02397-201ENST00000504409 DNAJC9-AS1A6NH13 148 aa4.35□□□□□ -1.71
LINC02397-201ENST00000504409 CEP290O15078 2479 aa4.34□□□□□ -1.71
LINC02397-201ENST00000504409 LY6G6EA0A0G2JKS1 128 aa4.34□□□□□ -1.71
LINC02397-201ENST00000504409 H3BNG1 76 aa4.34□□□□□ -1.71
LINC02397-201ENST00000504409 U3KQA8 63 aa4.34□□□□□ -1.71
LINC02397-201ENST00000504409 SOSTDC1Q6X4U4 206 aa4.34□□□□□ -1.71
LINC02397-201ENST00000504409 LINC01560Q8TB33 94 aa4.34□□□□□ -1.71
LINC02397-201ENST00000504409 Q6ZSV7 163 aa4.34□□□□□ -1.71
LINC02397-201ENST00000504409 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.34□□□□□ -1.71
LINC02397-201ENST00000504409 A0A087WVE0 104 aa4.34□□□□□ -1.71
LINC02397-201ENST00000504409 RSPO4Q2I0M5 234 aaPredicted RBP4.34□□□□□ -1.71
LINC02397-201ENST00000504409 Q8NBF4 154 aa4.34□□□□□ -1.71
LINC02397-201ENST00000504409 ACACAQ13085 2346 aa4.34□□□□□ -1.71
LINC02397-201ENST00000504409 LINC00337Q8N6G1 96 aa4.34□□□□□ -1.72
LINC02397-201ENST00000504409 CLPSL1A2RUU4 121 aa4.34□□□□□ -1.72
LINC02397-201ENST00000504409 C1orf64Q8NEQ6 169 aa4.34□□□□□ -1.72
LINC02397-201ENST00000504409 LITAFQ99732 161 aa4.34□□□□□ -1.72
LINC02397-201ENST00000504409 SYCNQ0VAF6 134 aa4.33□□□□□ -1.72
LINC02397-201ENST00000504409 PHF5AQ7RTV0 110 aaKnown RBP4.33□□□□□ -1.72
LINC02397-201ENST00000504409 WFDC10BQ8IUB3 73 aa4.33□□□□□ -1.72
LINC02397-201ENST00000504409 IGKV2D-24A0A075B6R9 120 aa4.33□□□□□ -1.72
LINC02397-201ENST00000504409 FAM19A1Q7Z5A9 133 aa4.32□□□□□ -1.72
LINC02397-201ENST00000504409 DEFB105AQ8NG35 78 aa4.32□□□□□ -1.72
LINC02397-201ENST00000504409 PCNX1Q96RV3 2341 aa4.32□□□□□ -1.72
LINC02397-201ENST00000504409 TRAV10A0A0B4J240 114 aa4.32□□□□□ -1.72
LINC02397-201ENST00000504409 TFF1P04155 84 aa4.32□□□□□ -1.72
LINC02397-201ENST00000504409 FHL3Q13643 280 aa4.32□□□□□ -1.72
LINC02397-201ENST00000504409 IGLV6-57P01721 117 aa4.32□□□□□ -1.72
LINC02397-201ENST00000504409 A0A0J9YWU9 116 aa4.31□□□□□ -1.72
LINC02397-201ENST00000504409 IGHV4-30-4P0DP06 118 aa4.31□□□□□ -1.72
LINC02397-201ENST00000504409 DEFB131BA0A096LNP1 70 aa4.31□□□□□ -1.72
LINC02397-201ENST00000504409 REG3GQ6UW15 175 aa4.31□□□□□ -1.72
LINC02397-201ENST00000504409 IGHV3OR16-9A0A0B4J2B5 98 aa4.31□□□□□ -1.72
LINC02397-201ENST00000504409 C3orf84H3BNL1 204 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms