RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 C7orf33Q8WU49 177 aa14.02□□□□□ -0.17
LSM6-203ENST00000503982 UBE2D4Q9Y2X8 147 aa14.02□□□□□ -0.17
LSM6-203ENST00000503982 IGHV1-58A0A0C4DH39 117 aa14.01□□□□□ -0.17
LSM6-203ENST00000503982 FABP9Q0Z7S8 132 aa14.01□□□□□ -0.17
LSM6-203ENST00000503982 PRSS3P2Q8NHM4 247 aa14.01□□□□□ -0.17
LSM6-203ENST00000503982 TRAPPC1Q9Y5R8 145 aa14.01□□□□□ -0.17
LSM6-203ENST00000503982 RAB5AP20339 215 aa14□□□□□ -0.17
LSM6-203ENST00000503982 ZNF664Q8N3J9 261 aa14□□□□□ -0.17
LSM6-203ENST00000503982 CDC42SE2Q9NRR3 84 aa14□□□□□ -0.17
LSM6-203ENST00000503982 ORMDL2Q53FV1 153 aa13.99□□□□□ -0.17
LSM6-203ENST00000503982 SERTAD4-AS1Q5TG53 156 aa13.99□□□□□ -0.17
LSM6-203ENST00000503982 LINC00526Q96FQ7 95 aa13.99□□□□□ -0.17
LSM6-203ENST00000503982 ZNF561-AS1K7EIQ3 104 aa13.98□□□□□ -0.17
LSM6-203ENST00000503982 STPG4Q8N801 248 aa13.98□□□□□ -0.17
LSM6-203ENST00000503982 SPANXA1Q9NS26 97 aa13.98□□□□□ -0.17
LSM6-203ENST00000503982 LOC389332A0A1B0GUA5 103 aa13.97□□□□□ -0.17
LSM6-203ENST00000503982 MALP21145 153 aa13.97□□□□□ -0.17
LSM6-203ENST00000503982 PLAC8Q9NZF1 115 aa13.97□□□□□ -0.17
LSM6-203ENST00000503982 PKIGQ9Y2B9 76 aa13.97□□□□□ -0.17
LSM6-203ENST00000503982 PYGO1Q9Y3Y4 419 aa13.97□□□□□ -0.17
LSM6-203ENST00000503982 NPSP0C0P6 89 aa13.96□□□□□ -0.17
LSM6-203ENST00000503982 G0S2P27469 103 aa13.96□□□□□ -0.17
LSM6-203ENST00000503982 IFI27P40305 119 aaPredicted RBP13.96□□□□□ -0.17
LSM6-203ENST00000503982 MRPS36P82909 103 aaKnown RBP13.96□□□□□ -0.17
LSM6-203ENST00000503982 RNASE13Q5GAN3 156 aaKnown RBP13.96□□□□□ -0.17
LSM6-203ENST00000503982 CD164L2Q6UWJ8 174 aa13.96□□□□□ -0.17
LSM6-203ENST00000503982 CARD19Q96LW7 228 aa13.96□□□□□ -0.17
LSM6-203ENST00000503982 A0A096LNI7 61 aa13.94□□□□□ -0.18
LSM6-203ENST00000503982 TRAV13-1A0A0B4J241 112 aa13.93□□□□□ -0.18
LSM6-203ENST00000503982 LINC01549A6NIU2 74 aa13.93□□□□□ -0.18
LSM6-203ENST00000503982 COLCA2A8K830 154 aa13.93□□□□□ -0.18
LSM6-203ENST00000503982 C1orf196B1AJZ1 125 aa13.93□□□□□ -0.18
LSM6-203ENST00000503982 RPL39P62891 51 aaKnown RBP13.93□□□□□ -0.18
LSM6-203ENST00000503982 SYCNQ0VAF6 134 aa13.93□□□□□ -0.18
LSM6-203ENST00000503982 C18orf32Q8TCD1 76 aa13.93□□□□□ -0.18
LSM6-203ENST00000503982 FAM104AQ969W3 186 aa13.93□□□□□ -0.18
LSM6-203ENST00000503982 COX7A2LO14548 114 aa13.92□□□□□ -0.18
LSM6-203ENST00000503982 Q6ZRU5 148 aa13.92□□□□□ -0.18
LSM6-203ENST00000503982 CYSLTR1Q9Y271 337 aa13.92□□□□□ -0.18
LSM6-203ENST00000503982 C2orf66Q6UXQ4 117 aa13.91□□□□□ -0.18
LSM6-203ENST00000503982 LINC00474Q9P2X8 69 aa13.91□□□□□ -0.18
LSM6-203ENST00000503982 Q6ZUT4 128 aa13.9□□□□□ -0.18
LSM6-203ENST00000503982 S100A1P23297 94 aa13.89□□□□□ -0.19
LSM6-203ENST00000503982 TOMM6Q96B49 74 aa13.89□□□□□ -0.19
LSM6-203ENST00000503982 IGLV4-69A0A075B6H9 119 aa13.88□□□□□ -0.19
LSM6-203ENST00000503982 C5orf38Q86SI9 138 aa13.88□□□□□ -0.19
LSM6-203ENST00000503982 PLA2G2DQ9UNK4 145 aa13.88□□□□□ -0.19
LSM6-203ENST00000503982 IGIPA6NJ69 53 aa13.87□□□□□ -0.19
LSM6-203ENST00000503982 FA2HQ7L5A8 372 aa13.87□□□□□ -0.19
LSM6-203ENST00000503982 URB1-AS1Q96HZ7 61 aa13.87□□□□□ -0.19
LSM6-203ENST00000503982 CAMK2N2Q96S95 79 aa13.87□□□□□ -0.19
LSM6-203ENST00000503982 TIMM17AQ99595 171 aa13.87□□□□□ -0.19
LSM6-203ENST00000503982 IGLV4-3A0A075B6K6 122 aa13.86□□□□□ -0.19
LSM6-203ENST00000503982 APOMO95445 188 aa13.86□□□□□ -0.19
LSM6-203ENST00000503982 RAB5BP61020 215 aa13.86□□□□□ -0.19
LSM6-203ENST00000503982 GAGE2BQ13066 116 aa13.86□□□□□ -0.19
LSM6-203ENST00000503982 LOC107984640A0A0U1RRK4 108 aa13.85□□□□□ -0.19
LSM6-203ENST00000503982 LINC00614P0C842 121 aa13.85□□□□□ -0.19
LSM6-203ENST00000503982 TRGC2P03986 189 aa13.84□□□□□ -0.19
LSM6-203ENST00000503982 TMEM141Q96I45 108 aa13.84□□□□□ -0.19
LSM6-203ENST00000503982 SCO1O75880 301 aa13.83□□□□□ -0.2
LSM6-203ENST00000503982 PRR3P79522 188 aaKnown RBP13.83□□□□□ -0.2
LSM6-203ENST00000503982 ERASQ7Z444 233 aa13.83□□□□□ -0.2
LSM6-203ENST00000503982 AMELXQ99217 191 aa13.83□□□□□ -0.2
LSM6-203ENST00000503982 ATP6V1G1O75348 118 aa13.82□□□□□ -0.2
LSM6-203ENST00000503982 SPAG11BQ08648 103 aa13.82□□□□□ -0.2
LSM6-203ENST00000503982 PAPPA-AS1Q5QFB9 102 aa13.82□□□□□ -0.2
LSM6-203ENST00000503982 PTTG1IPP53801 180 aa13.81□□□□□ -0.2
LSM6-203ENST00000503982 RPL18AQ02543 176 aaKnown RBP13.81□□□□□ -0.2
LSM6-203ENST00000503982 CHCHD1Q96BP2 118 aaKnown RBP13.81□□□□□ -0.2
LSM6-203ENST00000503982 A0A096LNJ9 63 aa13.8□□□□□ -0.2
LSM6-203ENST00000503982 LINC00173Q6ZV60 143 aa13.8□□□□□ -0.2
LSM6-203ENST00000503982 FAM19A3Q7Z5A8 133 aa13.8□□□□□ -0.2
LSM6-203ENST00000503982 OPRPNQ99935 248 aaPredicted RBP13.8□□□□□ -0.2
LSM6-203ENST00000503982 IFITM10A6NMD0 228 aa13.79□□□□□ -0.2
LSM6-203ENST00000503982 Q6ZN92 141 aa13.79□□□□□ -0.2
LSM6-203ENST00000503982 TEX43Q6ZNM6 134 aa13.79□□□□□ -0.2
LSM6-203ENST00000503982 ORAOV1Q8WV07 137 aa13.78□□□□□ -0.2
LSM6-203ENST00000503982 C2orf48Q96LS8 159 aa13.78□□□□□ -0.2
LSM6-203ENST00000503982 HMCN2Q8NDA2 5059 aa13.78□□□□□ -0.2
LSM6-203ENST00000503982 HBDP02042 147 aa13.77□□□□□ -0.21
LSM6-203ENST00000503982 MT1HL1P0DM35 61 aa13.77□□□□□ -0.21
LSM6-203ENST00000503982 SCGB3A1Q96QR1 104 aa13.77□□□□□ -0.21
LSM6-203ENST00000503982 C2orf88Q9BSF0 95 aa13.77□□□□□ -0.21
LSM6-203ENST00000503982 A0A0J9YXV3 536 aa13.76□□□□□ -0.21
LSM6-203ENST00000503982 UBE2D1P51668 147 aa13.76□□□□□ -0.21
LSM6-203ENST00000503982 PDZD11Q5EBL8 140 aa13.76□□□□□ -0.21
LSM6-203ENST00000503982 OR10D4PQ8NGN7 298 aa13.76□□□□□ -0.21
LSM6-203ENST00000503982 VCX2Q9H322 139 aa13.76□□□□□ -0.21
LSM6-203ENST00000503982 IGHV3OR16-9A0A0B4J2B5 98 aa13.75□□□□□ -0.21
LSM6-203ENST00000503982 Q6ZRP5 223 aa13.75□□□□□ -0.21
LSM6-203ENST00000503982 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.73□□□□□ -0.21
LSM6-203ENST00000503982 LINC00242Q5T6M2 205 aa13.73□□□□□ -0.21
LSM6-203ENST00000503982 NDUFA1O15239 70 aa13.72□□□□□ -0.21
LSM6-203ENST00000503982 SPINK6Q6UWN8 80 aa13.72□□□□□ -0.21
LSM6-203ENST00000503982 LINC01561Q8N1V8 128 aa13.72□□□□□ -0.21
LSM6-203ENST00000503982 LINC00310P59036 64 aa13.71□□□□□ -0.21
LSM6-203ENST00000503982 SEC11AP67812 179 aa13.71□□□□□ -0.21
LSM6-203ENST00000503982 C9orf116Q5BN46 136 aaPredicted RBP13.71□□□□□ -0.21
LSM6-203ENST00000503982 REG3GQ6UW15 175 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 231.1 ms