RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 TMEM189A5PLL7 270 aa2.16□□□□□ -2.06
UBE3D-205ENST00000503942 C19orf71A6NCJ1 209 aa2.16□□□□□ -2.06
UBE3D-205ENST00000503942 ZNF727A8MUV8 499 aa2.16□□□□□ -2.06
UBE3D-205ENST00000503942 TMEM250H0YL14 139 aa2.16□□□□□ -2.06
UBE3D-205ENST00000503942 M0R2P5 195 aa2.16□□□□□ -2.06
UBE3D-205ENST00000503942 IGLV7-43P04211 117 aa2.16□□□□□ -2.06
UBE3D-205ENST00000503942 S100A9P06702 114 aaKnown RBP2.16□□□□□ -2.06
UBE3D-205ENST00000503942 S100A4P26447 101 aaKnown RBP2.16□□□□□ -2.06
UBE3D-205ENST00000503942 GNG4P50150 75 aa2.16□□□□□ -2.06
UBE3D-205ENST00000503942 TAL2Q16559 108 aa2.16□□□□□ -2.06
UBE3D-205ENST00000503942 CLLU1Q5K131 121 aa2.16□□□□□ -2.06
UBE3D-205ENST00000503942 IBA57Q5T440 356 aaKnown RBP2.16□□□□□ -2.06
UBE3D-205ENST00000503942 OR10AG1Q8NH19 301 aa2.16□□□□□ -2.06
UBE3D-205ENST00000503942 SMIM7Q9BQ49 75 aa2.16□□□□□ -2.06
UBE3D-205ENST00000503942 TXNDC17Q9BRA2 123 aa2.16□□□□□ -2.06
UBE3D-205ENST00000503942 TCEAL7Q9BRU2 100 aa2.16□□□□□ -2.06
UBE3D-205ENST00000503942 V9GYY9 64 aa2.16□□□□□ -2.06
UBE3D-205ENST00000503942 NUPR2A6NF83 97 aa2.15□□□□□ -2.07
UBE3D-205ENST00000503942 M0R381 172 aa2.15□□□□□ -2.07
UBE3D-205ENST00000503942 GATCO43716 136 aaKnown RBP2.15□□□□□ -2.07
UBE3D-205ENST00000503942 ATP5G1P05496 136 aa2.15□□□□□ -2.07
UBE3D-205ENST00000503942 CRYGDP07320 174 aa2.15□□□□□ -2.07
UBE3D-205ENST00000503942 IGLC6P0CF74 106 aa2.15□□□□□ -2.07
UBE3D-205ENST00000503942 P0DMU3 169 aa2.15□□□□□ -2.07
UBE3D-205ENST00000503942 FAM231AP0DMU4 169 aa2.15□□□□□ -2.07
UBE3D-205ENST00000503942 FAM231CP0DMU5 169 aa2.15□□□□□ -2.07
UBE3D-205ENST00000503942 ADCYAP1P18509 176 aa2.15□□□□□ -2.07
UBE3D-205ENST00000503942 ASIPP42127 132 aa2.15□□□□□ -2.07
UBE3D-205ENST00000503942 FOXA3P55318 350 aaPredicted RBP2.15□□□□□ -2.07
UBE3D-205ENST00000503942 RAB14P61106 215 aa2.15□□□□□ -2.07
UBE3D-205ENST00000503942 PEA15Q15121 130 aa2.15□□□□□ -2.07
UBE3D-205ENST00000503942 CFAP126Q5VTH2 177 aa2.15□□□□□ -2.07
UBE3D-205ENST00000503942 LYZL1Q6UWQ5 148 aa2.15□□□□□ -2.07
UBE3D-205ENST00000503942 COMMD7Q86VX2 200 aa2.15□□□□□ -2.07
UBE3D-205ENST00000503942 OR2D3Q8NGH3 330 aa2.15□□□□□ -2.07
UBE3D-205ENST00000503942 ORAOV1Q8WV07 137 aa2.15□□□□□ -2.07
UBE3D-205ENST00000503942 IL36BQ9NZH7 164 aa2.15□□□□□ -2.07
UBE3D-205ENST00000503942 DNAH11Q96DT5 4516 aa2.15□□□□□ -2.07
UBE3D-205ENST00000503942 FAT2Q9NYQ8 4349 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 TRAV4A0A0B4J268 109 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 TRGV4A0A0C4DH28 118 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 LCE6AA0A183 80 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 LINC00862A6NCI5 91 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 NDUFS6O75380 124 aaKnown RBP2.14□□□□□ -2.07
UBE3D-205ENST00000503942 LY6G6CO95867 125 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 CXCL1P09341 107 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 PSMB2P49721 201 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 CRYBA4P53673 196 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 PMVKQ15126 192 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 ADIRFQ15847 76 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 ESRGQ1W209 222 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 TMEM241Q24JQ0 296 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 LGALS9BQ3B8N2 356 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 FAM74A4Q5TZK3 123 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 SPANXN1Q5VSR9 72 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 DEFB104AQ8WTQ1 72 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 NAT8Q9UHE5 227 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 PRO0628Q9UI54 55 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 HHLA3Q9XRX5 114 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 KLK5Q9Y337 293 aaPredicted RBP2.14□□□□□ -2.07
UBE3D-205ENST00000503942 PHLDA3Q9Y5J5 127 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 V9GYV3 84 aa2.14□□□□□ -2.07
UBE3D-205ENST00000503942 TMEM218A2RU14 115 aa2.13□□□□□ -2.07
UBE3D-205ENST00000503942 M0R2N4 97 aa2.13□□□□□ -2.07
UBE3D-205ENST00000503942 EVI2AP22794 236 aa2.13□□□□□ -2.07
UBE3D-205ENST00000503942 FAM231DQ6ZW35 169 aa2.13□□□□□ -2.07
UBE3D-205ENST00000503942 ZFP82Q8N141 532 aa2.13□□□□□ -2.07
UBE3D-205ENST00000503942 FER1L6-AS1Q8NA97 138 aa2.13□□□□□ -2.07
UBE3D-205ENST00000503942 NUP35Q8NFH5 326 aa2.13□□□□□ -2.07
UBE3D-205ENST00000503942 PTH2Q96A98 100 aa2.13□□□□□ -2.07
UBE3D-205ENST00000503942 SMIM12Q96EX1 92 aa2.13□□□□□ -2.07
UBE3D-205ENST00000503942 SFRP2Q96HF1 295 aa2.13□□□□□ -2.07
UBE3D-205ENST00000503942 OSTCQ9NRP0 149 aa2.13□□□□□ -2.07
UBE3D-205ENST00000503942 PRO0255Q9UI72 69 aa2.13□□□□□ -2.07
UBE3D-205ENST00000503942 LINC00588Q9Y4M8 146 aa2.13□□□□□ -2.07
UBE3D-205ENST00000503942 LY96Q9Y6Y9 160 aa2.13□□□□□ -2.07
UBE3D-205ENST00000503942 HECTD4Q9Y4D8 3996 aa2.12□□□□□ -2.07
UBE3D-205ENST00000503942 TRAV26-2A0A0B4J265 109 aa2.12□□□□□ -2.07
UBE3D-205ENST00000503942 HIGD1CA8MV81 97 aa2.12□□□□□ -2.07
UBE3D-205ENST00000503942 A8MWV9 139 aa2.12□□□□□ -2.07
UBE3D-205ENST00000503942 F8W036 122 aa2.12□□□□□ -2.07
UBE3D-205ENST00000503942 MGPP08493 103 aa2.12□□□□□ -2.07
UBE3D-205ENST00000503942 INAFM2P0DMQ5 153 aa2.12□□□□□ -2.07
UBE3D-205ENST00000503942 RPS20P60866 119 aaKnown RBP2.12□□□□□ -2.07
UBE3D-205ENST00000503942 LGALS9CQ6DKI2 356 aa2.12□□□□□ -2.07
UBE3D-205ENST00000503942 LYPD5Q6UWN5 251 aa2.12□□□□□ -2.07
UBE3D-205ENST00000503942 FA2HQ7L5A8 372 aa2.12□□□□□ -2.07
UBE3D-205ENST00000503942 FAM19A1Q7Z5A9 133 aa2.12□□□□□ -2.07
UBE3D-205ENST00000503942 GATD1Q8NB37 220 aa2.12□□□□□ -2.07
UBE3D-205ENST00000503942 ZNRF2Q8NHG8 242 aa2.12□□□□□ -2.07
UBE3D-205ENST00000503942 TSKUQ8WUA8 353 aa2.12□□□□□ -2.07
UBE3D-205ENST00000503942 CNFNQ9BYD5 112 aa2.12□□□□□ -2.07
UBE3D-205ENST00000503942 SMDT1Q9H4I9 107 aa2.12□□□□□ -2.07
UBE3D-205ENST00000503942 BIN3Q9NQY0 253 aa2.12□□□□□ -2.07
UBE3D-205ENST00000503942 ICOSQ9Y6W8 199 aa2.12□□□□□ -2.07
UBE3D-205ENST00000503942 DYNC1H1Q14204 4646 aaKnown RBP2.12□□□□□ -2.07
UBE3D-205ENST00000503942 DNAH5Q8TE73 4624 aa2.11□□□□□ -2.07
UBE3D-205ENST00000503942 A0A1B0GUT8 65 aa2.11□□□□□ -2.07
UBE3D-205ENST00000503942 TRBV6-4A0A1B0GX49 114 aa2.11□□□□□ -2.07
UBE3D-205ENST00000503942 A0A1W2PNN7 141 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms