RNA–Protein interactions for RNA: ENST00000502801.1

CCDC149-203, Transcript of coiled-coil domain containing 149, humanhuman

TSL 1 (best) BASIC

Gene CCDC149, Length 1,079 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-203ENST00000502801 TRAV9-1A0A075B6T8 112 aa16.5■□□□□ 0.23
CCDC149-203ENST00000502801 IGHV3OR16-9A0A0B4J2B5 98 aa16.5■□□□□ 0.23
CCDC149-203ENST00000502801 PKIGQ9Y2B9 76 aa16.5■□□□□ 0.23
CCDC149-203ENST00000502801 Q6ZRU5 148 aa16.49■□□□□ 0.23
CCDC149-203ENST00000502801 J3QL48 77 aa16.48■□□□□ 0.23
CCDC149-203ENST00000502801 KIAA1644Q3SXP7 199 aa16.48■□□□□ 0.23
CCDC149-203ENST00000502801 STPG4Q8N801 248 aa16.48■□□□□ 0.23
CCDC149-203ENST00000502801 TMEM141Q96I45 108 aa16.48■□□□□ 0.23
CCDC149-203ENST00000502801 CAMK2N2Q96S95 79 aa16.48■□□□□ 0.23
CCDC149-203ENST00000502801 CYSLTR1Q9Y271 337 aa16.48■□□□□ 0.23
CCDC149-203ENST00000502801 KRTAP29-1A8MX34 341 aaPredicted RBP16.47■□□□□ 0.23
CCDC149-203ENST00000502801 S100PP25815 95 aa16.47■□□□□ 0.23
CCDC149-203ENST00000502801 ORMDL2Q53FV1 153 aa16.47■□□□□ 0.23
CCDC149-203ENST00000502801 C2orf66Q6UXQ4 117 aa16.47■□□□□ 0.23
CCDC149-203ENST00000502801 C2orf48Q96LS8 159 aa16.47■□□□□ 0.23
CCDC149-203ENST00000502801 NXT2Q9NPJ8 142 aaKnown RBP16.47■□□□□ 0.23
CCDC149-203ENST00000502801 HNRNPA3P51991 378 aaKnown RBP16.46■□□□□ 0.23
CCDC149-203ENST00000502801 SPAG11BQ08648 103 aa16.46■□□□□ 0.23
CCDC149-203ENST00000502801 C10orf91Q5T1B1 145 aa16.46■□□□□ 0.23
CCDC149-203ENST00000502801 LINC00474Q9P2X8 69 aa16.46■□□□□ 0.23
CCDC149-203ENST00000502801 K7EMI3 77 aa16.45■□□□□ 0.22
CCDC149-203ENST00000502801 OR10D4PQ8NGN7 298 aa16.44■□□□□ 0.22
CCDC149-203ENST00000502801 ORAOV1Q8WV07 137 aa16.44■□□□□ 0.22
CCDC149-203ENST00000502801 PKHD1L1Q86WI1 4243 aa16.43■□□□□ 0.22
CCDC149-203ENST00000502801 LINC00242Q5T6M2 205 aa16.43■□□□□ 0.22
CCDC149-203ENST00000502801 TEX43Q6ZNM6 134 aa16.43■□□□□ 0.22
CCDC149-203ENST00000502801 CARHSP1Q9Y2V2 147 aaKnown RBP16.43■□□□□ 0.22
CCDC149-203ENST00000502801 TGIF2-C20orf24A0A0A6YYL0 155 aa16.42■□□□□ 0.22
CCDC149-203ENST00000502801 LOC107984640A0A0U1RRK4 108 aa16.42■□□□□ 0.22
CCDC149-203ENST00000502801 C7orf33Q8WU49 177 aa16.42■□□□□ 0.22
CCDC149-203ENST00000502801 GNB1LQ9BYB4 327 aa16.42■□□□□ 0.22
CCDC149-203ENST00000502801 ZC2HC1BQ5TFG8 222 aa16.41■□□□□ 0.22
CCDC149-203ENST00000502801 RPS10P5Q9NQ39 176 aa16.41■□□□□ 0.22
CCDC149-203ENST00000502801 PTTG1IPP53801 180 aa16.4■□□□□ 0.22
CCDC149-203ENST00000502801 GAGE2BQ13066 116 aa16.4■□□□□ 0.22
CCDC149-203ENST00000502801 Q6ZN92 141 aa16.4■□□□□ 0.22
CCDC149-203ENST00000502801 LRP1Q07954 4544 aaKnown RBP16.4■□□□□ 0.22
CCDC149-203ENST00000502801 A0A087WZ39 114 aa16.39■□□□□ 0.21
CCDC149-203ENST00000502801 IGIPA6NJ69 53 aa16.39■□□□□ 0.21
CCDC149-203ENST00000502801 UBE2D1P51668 147 aa16.39■□□□□ 0.21
CCDC149-203ENST00000502801 RHEBQ15382 184 aa16.39■□□□□ 0.21
CCDC149-203ENST00000502801 LINC00173Q6ZV60 143 aa16.39■□□□□ 0.21
CCDC149-203ENST00000502801 C2orf88Q9BSF0 95 aa16.39■□□□□ 0.21
CCDC149-203ENST00000502801 VCX2Q9H322 139 aa16.39■□□□□ 0.21
CCDC149-203ENST00000502801 AMELXQ99217 191 aa16.38■□□□□ 0.21
CCDC149-203ENST00000502801 A0A0J9YXV3 536 aa16.37■□□□□ 0.21
CCDC149-203ENST00000502801 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.37■□□□□ 0.21
CCDC149-203ENST00000502801 OXTP01178 125 aa16.37■□□□□ 0.21
CCDC149-203ENST00000502801 NPSP0C0P6 89 aa16.37■□□□□ 0.21
CCDC149-203ENST00000502801 G0S2P27469 103 aa16.37■□□□□ 0.21
CCDC149-203ENST00000502801 RNF151Q2KHN1 245 aa16.36■□□□□ 0.21
CCDC149-203ENST00000502801 COX19Q49B96 90 aa16.36■□□□□ 0.21
CCDC149-203ENST00000502801 ALKBH7Q9BT30 221 aaPredicted RBP16.36■□□□□ 0.21
CCDC149-203ENST00000502801 F8WDY8 70 aa16.35■□□□□ 0.21
CCDC149-203ENST00000502801 MRPL35Q9NZE8 188 aaKnown RBP16.35■□□□□ 0.21
CCDC149-203ENST00000502801 NDUFA1O15239 70 aa16.34■□□□□ 0.21
CCDC149-203ENST00000502801 C10orf25Q5T742 122 aa16.34■□□□□ 0.21
CCDC149-203ENST00000502801 TOMM6Q96B49 74 aa16.34■□□□□ 0.21
CCDC149-203ENST00000502801 RPL18AQ02543 176 aaKnown RBP16.33■□□□□ 0.2
CCDC149-203ENST00000502801 UNQ6190/PRO20217Q6UXQ8 127 aa16.33■□□□□ 0.2
CCDC149-203ENST00000502801 MRPL18Q9H0U6 180 aaKnown RBP16.33■□□□□ 0.2
CCDC149-203ENST00000502801 FAT3Q8TDW7 4589 aa16.33■□□□□ 0.2
CCDC149-203ENST00000502801 MT-ND6P03923 174 aa16.32■□□□□ 0.2
CCDC149-203ENST00000502801 FABP9Q0Z7S8 132 aa16.32■□□□□ 0.2
CCDC149-203ENST00000502801 KIAA0087Q14695 138 aa16.32■□□□□ 0.2
CCDC149-203ENST00000502801 TIMM17AQ99595 171 aa16.32■□□□□ 0.2
CCDC149-203ENST00000502801 PAPPA-AS1Q5QFB9 102 aa16.31■□□□□ 0.2
CCDC149-203ENST00000502801 A0A1W2PNN7 141 aa16.3■□□□□ 0.2
CCDC149-203ENST00000502801 LINC01561Q8N1V8 128 aa16.3■□□□□ 0.2
CCDC149-203ENST00000502801 APOC3P02656 99 aa16.29■□□□□ 0.2
CCDC149-203ENST00000502801 PRR3P79522 188 aaKnown RBP16.29■□□□□ 0.2
CCDC149-203ENST00000502801 FAM19A3Q7Z5A8 133 aa16.29■□□□□ 0.2
CCDC149-203ENST00000502801 C6orf48Q9UBA6 75 aa16.29■□□□□ 0.2
CCDC149-203ENST00000502801 LINC01546A6NGU7 62 aa16.28■□□□□ 0.2
CCDC149-203ENST00000502801 ERASQ7Z444 233 aa16.28■□□□□ 0.2
CCDC149-203ENST00000502801 SCGB3A1Q96QR1 104 aa16.28■□□□□ 0.2
CCDC149-203ENST00000502801 C9orf116Q5BN46 136 aaPredicted RBP16.27■□□□□ 0.2
CCDC149-203ENST00000502801 TLX1NBP0CAT3 122 aa16.25■□□□□ 0.19
CCDC149-203ENST00000502801 C2orf82Q6UX34 121 aa16.25■□□□□ 0.19
CCDC149-203ENST00000502801 HERVK_113P63121 156 aa16.24■□□□□ 0.19
CCDC149-203ENST00000502801 SEC11AP67812 179 aa16.24■□□□□ 0.19
CCDC149-203ENST00000502801 FA2HQ7L5A8 372 aa16.24■□□□□ 0.19
CCDC149-203ENST00000502801 SNAPINO95295 136 aa16.23■□□□□ 0.19
CCDC149-203ENST00000502801 NDUFA5Q16718 116 aa16.23■□□□□ 0.19
CCDC149-203ENST00000502801 Q6ZRP5 223 aa16.23■□□□□ 0.19
CCDC149-203ENST00000502801 SVBPQ8N300 66 aa16.23■□□□□ 0.19
CCDC149-203ENST00000502801 GEMIN7Q9H840 131 aaKnown RBP16.23■□□□□ 0.19
CCDC149-203ENST00000502801 SMCO4Q9NRQ5 59 aa16.23■□□□□ 0.19
CCDC149-203ENST00000502801 CDKN2A-AS1Q9UH64 79 aa16.23■□□□□ 0.19
CCDC149-203ENST00000502801 LINC01549A6NIU2 74 aa16.22■□□□□ 0.19
CCDC149-203ENST00000502801 TRAPPC1Q9Y5R8 145 aa16.22■□□□□ 0.19
CCDC149-203ENST00000502801 TRBV30A0A0K0K1B3 111 aa16.21■□□□□ 0.19
CCDC149-203ENST00000502801 TOMM7Q9P0U1 55 aa16.21■□□□□ 0.19
CCDC149-203ENST00000502801 PRSS2P07478 247 aa16.2■□□□□ 0.18
CCDC149-203ENST00000502801 GAGE2EQ4V326 116 aa16.19■□□□□ 0.18
CCDC149-203ENST00000502801 PACRGQ96M98 296 aaPredicted RBP16.19■□□□□ 0.18
CCDC149-203ENST00000502801 GAGE2DQ9UEU5 116 aa16.19■□□□□ 0.18
CCDC149-203ENST00000502801 C6orf226Q5I0X4 101 aa16.17■□□□□ 0.18
CCDC149-203ENST00000502801 PHF5AQ7RTV0 110 aaKnown RBP16.17■□□□□ 0.18
CCDC149-203ENST00000502801 Q8IZM0 81 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms