RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 IFITM10A6NMD0 228 aa6.83□□□□□ -1.32
CDK9-205ENST00000498339 NDUFC2-KCTD14E9PQ53 114 aa6.83□□□□□ -1.32
CDK9-205ENST00000498339 RAB4AP20338 218 aa6.83□□□□□ -1.32
CDK9-205ENST00000498339 SUMO2P61956 95 aaKnown RBP6.83□□□□□ -1.32
CDK9-205ENST00000498339 C9orf129Q5T035 196 aaKnown RBP6.83□□□□□ -1.32
CDK9-205ENST00000498339 PACRGQ96M98 296 aaPredicted RBP6.83□□□□□ -1.32
CDK9-205ENST00000498339 CTDSP1Q9GZU7 261 aa6.83□□□□□ -1.32
CDK9-205ENST00000498339 TMEM191AQ9H0A3 160 aa6.83□□□□□ -1.32
CDK9-205ENST00000498339 CRCT1Q9UGL9 99 aa6.83□□□□□ -1.32
CDK9-205ENST00000498339 TGIF2-C20orf24A0A0A6YYL0 155 aa6.82□□□□□ -1.32
CDK9-205ENST00000498339 IGHV3OR16-9A0A0B4J2B5 98 aa6.82□□□□□ -1.32
CDK9-205ENST00000498339 TRBV30A0A0K0K1B3 111 aa6.82□□□□□ -1.32
CDK9-205ENST00000498339 A0A1B0GUT8 65 aa6.82□□□□□ -1.32
CDK9-205ENST00000498339 RPL28P46779 137 aaKnown RBP6.82□□□□□ -1.32
CDK9-205ENST00000498339 TPRXLQ17RH7 258 aa6.82□□□□□ -1.32
CDK9-205ENST00000498339 TIMM21Q9BVV7 248 aa6.82□□□□□ -1.32
CDK9-205ENST00000498339 IGLV7-46A0A075B6I9 117 aa6.81□□□□□ -1.32
CDK9-205ENST00000498339 PPP1R2P9O14990 202 aa6.81□□□□□ -1.32
CDK9-205ENST00000498339 PPP1R17O96001 155 aa6.81□□□□□ -1.32
CDK9-205ENST00000498339 LINC01547P58512 204 aaPredicted RBP6.81□□□□□ -1.32
CDK9-205ENST00000498339 RPL39P62891 51 aaKnown RBP6.81□□□□□ -1.32
CDK9-205ENST00000498339 HBBP68871 147 aa6.81□□□□□ -1.32
CDK9-205ENST00000498339 C2orf82Q6UX34 121 aa6.81□□□□□ -1.32
CDK9-205ENST00000498339 LINC00173Q6ZV60 143 aa6.81□□□□□ -1.32
CDK9-205ENST00000498339 LINC00469Q8N7U9 141 aa6.81□□□□□ -1.32
CDK9-205ENST00000498339 LINC00304Q8N9R0 145 aa6.81□□□□□ -1.32
CDK9-205ENST00000498339 HIGD1CA8MV81 97 aa6.8□□□□□ -1.32
CDK9-205ENST00000498339 LBHQ53QV2 105 aaPredicted RBP6.8□□□□□ -1.32
CDK9-205ENST00000498339 ANAPC11Q9NYG5 84 aa6.8□□□□□ -1.32
CDK9-205ENST00000498339 C22orf24Q9Y442 160 aa6.8□□□□□ -1.32
CDK9-205ENST00000498339 HMSDA8MTL9 139 aa6.79□□□□□ -1.32
CDK9-205ENST00000498339 CEBPGP53567 150 aa6.79□□□□□ -1.32
CDK9-205ENST00000498339 CT83Q5H943 113 aa6.79□□□□□ -1.32
CDK9-205ENST00000498339 LCE2DQ5TA82 110 aaPredicted RBP6.79□□□□□ -1.32
CDK9-205ENST00000498339 FAM231DQ6ZW35 169 aa6.79□□□□□ -1.32
CDK9-205ENST00000498339 NRACQ8N912 160 aa6.79□□□□□ -1.32
CDK9-205ENST00000498339 BCE1O60756 84 aa6.78□□□□□ -1.32
CDK9-205ENST00000498339 TAGLN2P37802 199 aaKnown RBP6.78□□□□□ -1.32
CDK9-205ENST00000498339 LINC00242Q5T6M2 205 aa6.78□□□□□ -1.32
CDK9-205ENST00000498339 SPANXA1Q9NS26 97 aa6.78□□□□□ -1.32
CDK9-205ENST00000498339 PRSS2P07478 247 aa6.77□□□□□ -1.33
CDK9-205ENST00000498339 RIGQ13278 110 aa6.77□□□□□ -1.33
CDK9-205ENST00000498339 KIAA0087Q14695 138 aa6.77□□□□□ -1.33
CDK9-205ENST00000498339 XAGE1AQ9HD64 81 aa6.77□□□□□ -1.33
CDK9-205ENST00000498339 ZNF727A8MUV8 499 aa6.76□□□□□ -1.33
CDK9-205ENST00000498339 TCAPO15273 167 aa6.76□□□□□ -1.33
CDK9-205ENST00000498339 CKS1BP61024 79 aa6.76□□□□□ -1.33
CDK9-205ENST00000498339 KRTAP13-2Q52LG2 175 aa6.76□□□□□ -1.33
CDK9-205ENST00000498339 MRPL55Q7Z7F7 128 aaKnown RBP6.76□□□□□ -1.33
CDK9-205ENST00000498339 TOMM7Q9P0U1 55 aa6.76□□□□□ -1.33
CDK9-205ENST00000498339 IGKV2D-26A0A0A0MRZ7 120 aa6.75□□□□□ -1.33
CDK9-205ENST00000498339 UBE2AP49459 152 aa6.75□□□□□ -1.33
CDK9-205ENST00000498339 MRPS36P82909 103 aaKnown RBP6.75□□□□□ -1.33
CDK9-205ENST00000498339 SRSF3P84103 164 aaKnown RBP6.75□□□□□ -1.33
CDK9-205ENST00000498339 PPDPFQ9H3Y8 114 aa6.75□□□□□ -1.33
CDK9-205ENST00000498339 RPL37AP8A6NKH3 93 aa6.74□□□□□ -1.33
CDK9-205ENST00000498339 IFI27P40305 119 aaPredicted RBP6.74□□□□□ -1.33
CDK9-205ENST00000498339 MRPL51Q4U2R6 128 aaKnown RBP6.74□□□□□ -1.33
CDK9-205ENST00000498339 FAM104AQ969W3 186 aa6.74□□□□□ -1.33
CDK9-205ENST00000498339 C20orf78Q9BR46 151 aa6.74□□□□□ -1.33
CDK9-205ENST00000498339 CKS2P33552 79 aa6.73□□□□□ -1.33
CDK9-205ENST00000498339 RGS21Q2M5E4 152 aa6.73□□□□□ -1.33
CDK9-205ENST00000498339 SMIM2Q9BVW6 85 aa6.73□□□□□ -1.33
CDK9-205ENST00000498339 GAGE10A6NGK3 116 aa6.72□□□□□ -1.33
CDK9-205ENST00000498339 TMEM250H0YL14 139 aa6.72□□□□□ -1.33
CDK9-205ENST00000498339 FAM229BQ4G0N7 80 aa6.72□□□□□ -1.33
CDK9-205ENST00000498339 LINC00337Q8N6G1 96 aa6.72□□□□□ -1.33
CDK9-205ENST00000498339 TP73-AS1Q9UF72 201 aa6.72□□□□□ -1.33
CDK9-205ENST00000498339 TNFRSF6BO95407 300 aa6.71□□□□□ -1.34
CDK9-205ENST00000498339 C6orf226Q5I0X4 101 aa6.71□□□□□ -1.34
CDK9-205ENST00000498339 FAM104BQ5XKR9 115 aa6.71□□□□□ -1.34
CDK9-205ENST00000498339 TEX43Q6ZNM6 134 aa6.71□□□□□ -1.34
CDK9-205ENST00000498339 SMIM7Q9BQ49 75 aa6.71□□□□□ -1.34
CDK9-205ENST00000498339 C2orf88Q9BSF0 95 aa6.71□□□□□ -1.34
CDK9-205ENST00000498339 LINC00862A6NCI5 91 aa6.7□□□□□ -1.34
CDK9-205ENST00000498339 LINC01551Q86U37 167 aa6.7□□□□□ -1.34
CDK9-205ENST00000498339 TMEM141Q96I45 108 aa6.7□□□□□ -1.34
CDK9-205ENST00000498339 ALKBH7Q9BT30 221 aaPredicted RBP6.7□□□□□ -1.34
CDK9-205ENST00000498339 IGLV4-3A0A075B6K6 122 aa6.69□□□□□ -1.34
CDK9-205ENST00000498339 TRBV24-1A0A075B6N3 115 aa6.69□□□□□ -1.34
CDK9-205ENST00000498339 D6R8Y8 96 aa6.69□□□□□ -1.34
CDK9-205ENST00000498339 RAB5AP20339 215 aa6.69□□□□□ -1.34
CDK9-205ENST00000498339 RPL32P62910 135 aaKnown RBP6.69□□□□□ -1.34
CDK9-205ENST00000498339 Q6ZN92 141 aa6.69□□□□□ -1.34
CDK9-205ENST00000498339 Q8IZM0 81 aa6.69□□□□□ -1.34
CDK9-205ENST00000498339 LINC00167Q96N53 147 aa6.69□□□□□ -1.34
CDK9-205ENST00000498339 OSTCQ9NRP0 149 aa6.69□□□□□ -1.34
CDK9-205ENST00000498339 NAT8BQ9UHF3 227 aa6.69□□□□□ -1.34
CDK9-205ENST00000498339 LINC01561Q8N1V8 128 aa6.68□□□□□ -1.34
CDK9-205ENST00000498339 F8VRH5 84 aa6.67□□□□□ -1.34
CDK9-205ENST00000498339 NPYP01303 97 aa6.67□□□□□ -1.34
CDK9-205ENST00000498339 NKAPP1Q8N9T2 125 aa6.67□□□□□ -1.34
CDK9-205ENST00000498339 EIF5A2Q9GZV4 153 aaKnown RBP6.67□□□□□ -1.34
CDK9-205ENST00000498339 V9GYV3 84 aa6.67□□□□□ -1.34
CDK9-205ENST00000498339 PRLHP81277 87 aa6.66□□□□□ -1.34
CDK9-205ENST00000498339 PNRC1Q12796 327 aaPredicted RBP6.66□□□□□ -1.34
CDK9-205ENST00000498339 ASB16-AS1Q495Z4 193 aa6.66□□□□□ -1.34
CDK9-205ENST00000498339 ZC2HC1BQ5TFG8 222 aa6.66□□□□□ -1.34
CDK9-205ENST00000498339 SLC51BQ86UW2 128 aa6.66□□□□□ -1.34
CDK9-205ENST00000498339 PYGO1Q9Y3Y4 419 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms