RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 NEGR1Q7Z3B1 354 aa3.74□□□□□ -1.81
HMGXB4-208ENST00000498325 ERASQ7Z444 233 aa3.74□□□□□ -1.81
HMGXB4-208ENST00000498325 BOD1L2Q8IYS8 172 aa3.74□□□□□ -1.81
HMGXB4-208ENST00000498325 NEXN-AS1Q8NBZ9 246 aa3.74□□□□□ -1.81
HMGXB4-208ENST00000498325 SCGB3A1Q96QR1 104 aa3.74□□□□□ -1.81
HMGXB4-208ENST00000498325 HIGD1BQ9P298 99 aa3.74□□□□□ -1.81
HMGXB4-208ENST00000498325 TRAV12-1A0A0B4J245 112 aa3.73□□□□□ -1.81
HMGXB4-208ENST00000498325 IGHV4-28A0A0C4DH34 117 aa3.73□□□□□ -1.81
HMGXB4-208ENST00000498325 TMEM238C9JI98 176 aa3.73□□□□□ -1.81
HMGXB4-208ENST00000498325 H0Y8G0 127 aa3.73□□□□□ -1.81
HMGXB4-208ENST00000498325 SPART-AS1P0CW21 52 aa3.73□□□□□ -1.81
HMGXB4-208ENST00000498325 DEFB130BP0DP73 79 aa3.73□□□□□ -1.81
HMGXB4-208ENST00000498325 DEFB130AP0DP74 79 aa3.73□□□□□ -1.81
HMGXB4-208ENST00000498325 FGF6P10767 208 aa3.73□□□□□ -1.81
HMGXB4-208ENST00000498325 PAPPA-AS1Q5QFB9 102 aa3.73□□□□□ -1.81
HMGXB4-208ENST00000498325 CFAP161Q6P656 301 aa3.73□□□□□ -1.81
HMGXB4-208ENST00000498325 Q6ZVH6 145 aa3.73□□□□□ -1.81
HMGXB4-208ENST00000498325 DAZ4Q86SG3 579 aaKnown RBP3.73□□□□□ -1.81
HMGXB4-208ENST00000498325 LINC00612Q8N6U2 182 aa3.73□□□□□ -1.81
HMGXB4-208ENST00000498325 SLC25A29Q8N8R3 303 aa3.73□□□□□ -1.81
HMGXB4-208ENST00000498325 ZNRF2Q8NHG8 242 aa3.73□□□□□ -1.81
HMGXB4-208ENST00000498325 TMEM141Q96I45 108 aa3.73□□□□□ -1.81
HMGXB4-208ENST00000498325 PRADC1Q9BSG0 188 aa3.73□□□□□ -1.81
HMGXB4-208ENST00000498325 DAZ3Q9NR90 486 aaKnown RBP3.73□□□□□ -1.81
HMGXB4-208ENST00000498325 A0A087WX48 190 aa3.72□□□□□ -1.81
HMGXB4-208ENST00000498325 A0A1W2PPM0 123 aa3.72□□□□□ -1.81
HMGXB4-208ENST00000498325 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
HMGXB4-208ENST00000498325 TSHBP01222 138 aa3.72□□□□□ -1.81
HMGXB4-208ENST00000498325 ATP5G1P05496 136 aa3.72□□□□□ -1.81
HMGXB4-208ENST00000498325 SMIM13P0DJ93 91 aa3.72□□□□□ -1.81
HMGXB4-208ENST00000498325 P0DMU3 169 aa3.72□□□□□ -1.81
HMGXB4-208ENST00000498325 FAM231AP0DMU4 169 aa3.72□□□□□ -1.81
HMGXB4-208ENST00000498325 FAM231CP0DMU5 169 aa3.72□□□□□ -1.81
HMGXB4-208ENST00000498325 FABP2P12104 132 aa3.72□□□□□ -1.81
HMGXB4-208ENST00000498325 DAD1P61803 113 aa3.72□□□□□ -1.81
HMGXB4-208ENST00000498325 TAL2Q16559 108 aa3.72□□□□□ -1.81
HMGXB4-208ENST00000498325 FAM222AQ5U5X8 452 aa3.72□□□□□ -1.81
HMGXB4-208ENST00000498325 Q8NAQ8 132 aa3.72□□□□□ -1.81
HMGXB4-208ENST00000498325 C20orf203Q8NBC4 194 aa3.72□□□□□ -1.81
HMGXB4-208ENST00000498325 PHLDA1Q8WV24 401 aaPredicted RBP3.72□□□□□ -1.81
HMGXB4-208ENST00000498325 TIMM17AQ99595 171 aa3.72□□□□□ -1.81
HMGXB4-208ENST00000498325 PRO0255Q9UI72 69 aa3.72□□□□□ -1.81
HMGXB4-208ENST00000498325 HHLA3Q9XRX5 114 aa3.72□□□□□ -1.81
HMGXB4-208ENST00000498325 DYNC1H1Q14204 4646 aaKnown RBP3.71□□□□□ -1.81
HMGXB4-208ENST00000498325 GAGE12JA6NER3 117 aa3.71□□□□□ -1.82
HMGXB4-208ENST00000498325 DPM2O94777 84 aa3.71□□□□□ -1.82
HMGXB4-208ENST00000498325 CRYBA4P53673 196 aa3.71□□□□□ -1.82
HMGXB4-208ENST00000498325 UBE2D3P61077 147 aa3.71□□□□□ -1.82
HMGXB4-208ENST00000498325 UBE2D2P62837 147 aa3.71□□□□□ -1.82
HMGXB4-208ENST00000498325 GAGE4Q13068 117 aa3.71□□□□□ -1.82
HMGXB4-208ENST00000498325 GAGE5Q13069 117 aa3.71□□□□□ -1.82
HMGXB4-208ENST00000498325 PMVKQ15126 192 aa3.71□□□□□ -1.82
HMGXB4-208ENST00000498325 MTURNQ8N3F0 131 aa3.71□□□□□ -1.82
HMGXB4-208ENST00000498325 GTSF1LQ9H1H1 148 aa3.71□□□□□ -1.82
HMGXB4-208ENST00000498325 PYGO1Q9Y3Y4 419 aa3.71□□□□□ -1.82
HMGXB4-208ENST00000498325 SPCS1Q9Y6A9 102 aa3.71□□□□□ -1.82
HMGXB4-208ENST00000498325 IGHV3-38A0A0C4DH36 116 aa3.7□□□□□ -1.82
HMGXB4-208ENST00000498325 A0A1B0GV72 72 aa3.7□□□□□ -1.82
HMGXB4-208ENST00000498325 IGIPA6NJ69 53 aa3.7□□□□□ -1.82
HMGXB4-208ENST00000498325 F8VRH5 84 aa3.7□□□□□ -1.82
HMGXB4-208ENST00000498325 F8W1H4 67 aa3.7□□□□□ -1.82
HMGXB4-208ENST00000498325 H3BUT2 72 aa3.7□□□□□ -1.82
HMGXB4-208ENST00000498325 H7C423 109 aa3.7□□□□□ -1.82
HMGXB4-208ENST00000498325 DEFB4AO15263 64 aa3.7□□□□□ -1.82
HMGXB4-208ENST00000498325 IGKCP01834 107 aa3.7□□□□□ -1.82
HMGXB4-208ENST00000498325 PLNP26678 52 aa3.7□□□□□ -1.82
HMGXB4-208ENST00000498325 RPL39P62891 51 aaKnown RBP3.7□□□□□ -1.82
HMGXB4-208ENST00000498325 DEFB104AQ8WTQ1 72 aa3.7□□□□□ -1.82
HMGXB4-208ENST00000498325 BAALCQ8WXS3 180 aa3.7□□□□□ -1.82
HMGXB4-208ENST00000498325 SIGMAR1Q99720 223 aa3.7□□□□□ -1.82
HMGXB4-208ENST00000498325 TIMM21Q9BVV7 248 aa3.7□□□□□ -1.82
HMGXB4-208ENST00000498325 VCX2Q9H322 139 aa3.7□□□□□ -1.82
HMGXB4-208ENST00000498325 SPANXA1Q9NS26 97 aa3.7□□□□□ -1.82
HMGXB4-208ENST00000498325 Q9UF83 564 aa3.7□□□□□ -1.82
HMGXB4-208ENST00000498325 NACAE9PAV3 2078 aa3.7□□□□□ -1.82
HMGXB4-208ENST00000498325 KMT2AQ03164 3969 aa3.69□□□□□ -1.82
HMGXB4-208ENST00000498325 TRBV25-1A0A075B6N4 114 aa3.69□□□□□ -1.82
HMGXB4-208ENST00000498325 F5H768 121 aa3.69□□□□□ -1.82
HMGXB4-208ENST00000498325 UBE2L6O14933 153 aa3.69□□□□□ -1.82
HMGXB4-208ENST00000498325 SH2D6Q7Z4S9 175 aa3.69□□□□□ -1.82
HMGXB4-208ENST00000498325 ATP6V0E2Q8NHE4 81 aa3.69□□□□□ -1.82
HMGXB4-208ENST00000498325 TMEM101Q96IK0 257 aa3.69□□□□□ -1.82
HMGXB4-208ENST00000498325 CHCHD7Q9BUK0 85 aa3.69□□□□□ -1.82
HMGXB4-208ENST00000498325 TM2D2Q9BX73 214 aa3.69□□□□□ -1.82
HMGXB4-208ENST00000498325 C11orf68Q9H3H3 251 aaKnown RBP3.69□□□□□ -1.82
HMGXB4-208ENST00000498325 MRPL35Q9NZE8 188 aaKnown RBP3.69□□□□□ -1.82
HMGXB4-208ENST00000498325 IGLV4-3A0A075B6K6 122 aa3.68□□□□□ -1.82
HMGXB4-208ENST00000498325 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.68□□□□□ -1.82
HMGXB4-208ENST00000498325 LOC100131303A0A0U1RQF7 123 aa3.68□□□□□ -1.82
HMGXB4-208ENST00000498325 IGKV2-29A2NJV5 120 aaPredicted RBP3.68□□□□□ -1.82
HMGXB4-208ENST00000498325 MRPS36P82909 103 aaKnown RBP3.68□□□□□ -1.82
HMGXB4-208ENST00000498325 MRPL23Q16540 153 aaKnown RBP3.68□□□□□ -1.82
HMGXB4-208ENST00000498325 SBSPONQ8IVN8 264 aa3.68□□□□□ -1.82
HMGXB4-208ENST00000498325 TMEM243Q9BU79 118 aa3.68□□□□□ -1.82
HMGXB4-208ENST00000498325 CELA1Q9UNI1 258 aa3.68□□□□□ -1.82
HMGXB4-208ENST00000498325 UBE2D4Q9Y2X8 147 aa3.68□□□□□ -1.82
HMGXB4-208ENST00000498325 CSDC2Q9Y534 153 aaKnown RBP3.68□□□□□ -1.82
HMGXB4-208ENST00000498325 HSPG2P98160 4391 aa3.68□□□□□ -1.82
HMGXB4-208ENST00000498325 DNAH11Q96DT5 4516 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 TRAV26-1A0A087WT03 109 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms