RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 NHP2Q9NX24 153 aaKnown RBP4.02□□□□□ -1.77
CACNA1C-229ENST00000496818 TRBV7-3A0A075B6L6 115 aa4.01□□□□□ -1.77
CACNA1C-229ENST00000496818 SMKR1H3BMG3 65 aa4.01□□□□□ -1.77
CACNA1C-229ENST00000496818 IGKV2-30P06310 120 aa4.01□□□□□ -1.77
CACNA1C-229ENST00000496818 PRSS2P07478 247 aa4.01□□□□□ -1.77
CACNA1C-229ENST00000496818 LEPP41159 167 aa4.01□□□□□ -1.77
CACNA1C-229ENST00000496818 UBE2D1P51668 147 aa4.01□□□□□ -1.77
CACNA1C-229ENST00000496818 UBE2D3P61077 147 aa4.01□□□□□ -1.77
CACNA1C-229ENST00000496818 UBE2D2P62837 147 aa4.01□□□□□ -1.77
CACNA1C-229ENST00000496818 PCP2Q8IVA1 136 aa4.01□□□□□ -1.77
CACNA1C-229ENST00000496818 C1orf158Q8N1D5 194 aa4.01□□□□□ -1.77
CACNA1C-229ENST00000496818 RAB37Q96AX2 223 aa4.01□□□□□ -1.77
CACNA1C-229ENST00000496818 FAM19A4Q96LR4 140 aa4.01□□□□□ -1.77
CACNA1C-229ENST00000496818 LINC00477Q96M19 166 aa4.01□□□□□ -1.77
CACNA1C-229ENST00000496818 HIST1H4GQ99525 98 aa4.01□□□□□ -1.77
CACNA1C-229ENST00000496818 GTSF1LQ9H1H1 148 aa4.01□□□□□ -1.77
CACNA1C-229ENST00000496818 GEMIN7Q9H840 131 aaKnown RBP4.01□□□□□ -1.77
CACNA1C-229ENST00000496818 PRO0461Q9UI25 63 aa4.01□□□□□ -1.77
CACNA1C-229ENST00000496818 ERG28Q9UKR5 140 aa4.01□□□□□ -1.77
CACNA1C-229ENST00000496818 VPS13DQ5THJ4 4388 aa4□□□□□ -1.77
CACNA1C-229ENST00000496818 DNAH10Q8IVF4 4471 aa4□□□□□ -1.77
CACNA1C-229ENST00000496818 IGLV5-52A0A0A0MRZ9 124 aa4□□□□□ -1.77
CACNA1C-229ENST00000496818 TRAV21A0A0B4J279 112 aa4□□□□□ -1.77
CACNA1C-229ENST00000496818 FAM240AA0A1B0GVK7 77 aa4□□□□□ -1.77
CACNA1C-229ENST00000496818 A8MWV9 139 aa4□□□□□ -1.77
CACNA1C-229ENST00000496818 LINC01587Q99440 93 aa4□□□□□ -1.77
CACNA1C-229ENST00000496818 TIMM8BQ9Y5J9 83 aaPredicted RBP4□□□□□ -1.77
CACNA1C-229ENST00000496818 TRAV12-2A0A075B6T6 113 aa3.99□□□□□ -1.77
CACNA1C-229ENST00000496818 A8MTW9 85 aa3.99□□□□□ -1.77
CACNA1C-229ENST00000496818 EPM2AB3EWF7 344 aa3.99□□□□□ -1.77
CACNA1C-229ENST00000496818 SPINK8P0C7L1 97 aa3.99□□□□□ -1.77
CACNA1C-229ENST00000496818 HTN1P15515 57 aa3.99□□□□□ -1.77
CACNA1C-229ENST00000496818 GAGE5Q13069 117 aa3.99□□□□□ -1.77
CACNA1C-229ENST00000496818 GAGE6Q13070 117 aa3.99□□□□□ -1.77
CACNA1C-229ENST00000496818 ETDBQ3ZM63 59 aa3.99□□□□□ -1.77
CACNA1C-229ENST00000496818 SPANXN1Q5VSR9 72 aa3.99□□□□□ -1.77
CACNA1C-229ENST00000496818 AMTNQ6UX39 209 aa3.99□□□□□ -1.77
CACNA1C-229ENST00000496818 Q6ZUT4 128 aa3.99□□□□□ -1.77
CACNA1C-229ENST00000496818 ZFAND2AQ8N6M9 145 aa3.99□□□□□ -1.77
CACNA1C-229ENST00000496818 TMEM263Q8WUH6 116 aaKnown RBP3.99□□□□□ -1.77
CACNA1C-229ENST00000496818 TOMM6Q96B49 74 aa3.99□□□□□ -1.77
CACNA1C-229ENST00000496818 TMEM141Q96I45 108 aa3.99□□□□□ -1.77
CACNA1C-229ENST00000496818 SMIM2Q9BVW6 85 aa3.99□□□□□ -1.77
CACNA1C-229ENST00000496818 Q9H8V8 135 aa3.99□□□□□ -1.77
CACNA1C-229ENST00000496818 LINC00588Q9Y4M8 146 aa3.99□□□□□ -1.77
CACNA1C-229ENST00000496818 DNAH6Q9C0G6 4158 aa3.99□□□□□ -1.77
CACNA1C-229ENST00000496818 FAT2Q9NYQ8 4349 aa3.98□□□□□ -1.77
CACNA1C-229ENST00000496818 TRAV26-1A0A087WT03 109 aa3.98□□□□□ -1.77
CACNA1C-229ENST00000496818 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.98□□□□□ -1.77
CACNA1C-229ENST00000496818 A0A0B4J2C4 111 aa3.98□□□□□ -1.77
CACNA1C-229ENST00000496818 NXPH4O95158 308 aa3.98□□□□□ -1.77
CACNA1C-229ENST00000496818 GAS8-AS1O95177 125 aa3.98□□□□□ -1.77
CACNA1C-229ENST00000496818 SCGB1C2P0DMR2 95 aa3.98□□□□□ -1.77
CACNA1C-229ENST00000496818 RPL13AP40429 203 aaKnown RBP3.98□□□□□ -1.77
CACNA1C-229ENST00000496818 WFDC2Q14508 124 aa3.98□□□□□ -1.77
CACNA1C-229ENST00000496818 PRR9Q5T870 116 aa3.98□□□□□ -1.77
CACNA1C-229ENST00000496818 C10orf126Q8N4M7 172 aa3.98□□□□□ -1.77
CACNA1C-229ENST00000496818 TIMM17AQ99595 171 aa3.98□□□□□ -1.77
CACNA1C-229ENST00000496818 UPK3BQ9BT76 320 aa3.98□□□□□ -1.77
CACNA1C-229ENST00000496818 KRTAP4-2Q9BYR5 136 aa3.98□□□□□ -1.77
CACNA1C-229ENST00000496818 IMUPQ9GZP8 106 aa3.98□□□□□ -1.77
CACNA1C-229ENST00000496818 MRPL35Q9NZE8 188 aaKnown RBP3.98□□□□□ -1.77
CACNA1C-229ENST00000496818 PKHD1P08F94 4074 aa3.98□□□□□ -1.77
CACNA1C-229ENST00000496818 DNAH2Q9P225 4427 aa3.98□□□□□ -1.77
CACNA1C-229ENST00000496818 DNAH11Q96DT5 4516 aa3.97□□□□□ -1.77
CACNA1C-229ENST00000496818 IGKV2D-26A0A0A0MRZ7 120 aa3.97□□□□□ -1.77
CACNA1C-229ENST00000496818 A0A0J9YY99 117 aa3.97□□□□□ -1.77
CACNA1C-229ENST00000496818 PLAC8L1A1L4L8 177 aa3.97□□□□□ -1.77
CACNA1C-229ENST00000496818 C11orf86A6NJI1 115 aa3.97□□□□□ -1.77
CACNA1C-229ENST00000496818 H3BVH4 76 aa3.97□□□□□ -1.77
CACNA1C-229ENST00000496818 ACYP1P07311 99 aa3.97□□□□□ -1.77
CACNA1C-229ENST00000496818 GATA1P15976 413 aaPredicted RBP3.97□□□□□ -1.77
CACNA1C-229ENST00000496818 SEC61BP60468 96 aaKnown RBP3.97□□□□□ -1.77
CACNA1C-229ENST00000496818 COPS9Q8WXC6 57 aa3.97□□□□□ -1.77
CACNA1C-229ENST00000496818 C18orf15Q96N68 181 aa3.97□□□□□ -1.77
CACNA1C-229ENST00000496818 ODF3Q96PU9 254 aa3.97□□□□□ -1.77
CACNA1C-229ENST00000496818 ANAPC13Q9BS18 74 aa3.97□□□□□ -1.77
CACNA1C-229ENST00000496818 DPH3P1Q9H4G8 78 aa3.97□□□□□ -1.77
CACNA1C-229ENST00000496818 NOP10Q9NPE3 64 aaKnown RBP3.97□□□□□ -1.77
CACNA1C-229ENST00000496818 TRAV26-2A0A0B4J265 109 aa3.96□□□□□ -1.78
CACNA1C-229ENST00000496818 SDHAF1A6NFY7 115 aa3.96□□□□□ -1.78
CACNA1C-229ENST00000496818 KLLNB2CW77 178 aa3.96□□□□□ -1.78
CACNA1C-229ENST00000496818 H3BNG1 76 aa3.96□□□□□ -1.78
CACNA1C-229ENST00000496818 SNCGO76070 127 aa3.96□□□□□ -1.78
CACNA1C-229ENST00000496818 PRM2P04554 102 aa3.96□□□□□ -1.78
CACNA1C-229ENST00000496818 S100A4P26447 101 aaKnown RBP3.96□□□□□ -1.78
CACNA1C-229ENST00000496818 RNASE4P34096 147 aaKnown RBP3.96□□□□□ -1.78
CACNA1C-229ENST00000496818 LINC00315P59091 139 aa3.96□□□□□ -1.78
CACNA1C-229ENST00000496818 SRSF9Q13242 221 aaKnown RBP eCLIP3.96□□□□□ -1.78
CACNA1C-229ENST00000496818 SCGB1D4Q6XE38 83 aa3.96□□□□□ -1.78
CACNA1C-229ENST00000496818 RASL10AQ92737 203 aa3.96□□□□□ -1.78
CACNA1C-229ENST00000496818 SCGB3A1Q96QR1 104 aa3.96□□□□□ -1.78
CACNA1C-229ENST00000496818 TMEM126AQ9H061 195 aa3.96□□□□□ -1.78
CACNA1C-229ENST00000496818 PPDPFQ9H3Y8 114 aa3.96□□□□□ -1.78
CACNA1C-229ENST00000496818 TRGV2A0A075B6R0 118 aa3.95□□□□□ -1.78
CACNA1C-229ENST00000496818 ZNF815PA8K554 130 aa3.95□□□□□ -1.78
CACNA1C-229ENST00000496818 H3BT86 120 aa3.95□□□□□ -1.78
CACNA1C-229ENST00000496818 GAGE7O76087 117 aa3.95□□□□□ -1.78
CACNA1C-229ENST00000496818 COX6CP09669 75 aa3.95□□□□□ -1.78
CACNA1C-229ENST00000496818 GAGE12FP0CL80 117 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms