RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 Q6ZSA8 131 aa4.97□□□□□ -1.61
CDHR3-214ENST00000496633 GNB1LQ9BYB4 327 aa4.97□□□□□ -1.61
CDHR3-214ENST00000496633 LINC00474Q9P2X8 69 aa4.97□□□□□ -1.61
CDHR3-214ENST00000496633 UBE2D4Q9Y2X8 147 aa4.97□□□□□ -1.61
CDHR3-214ENST00000496633 PYGO1Q9Y3Y4 419 aa4.97□□□□□ -1.61
CDHR3-214ENST00000496633 IGHV3-64A0A075B6Q5 118 aa4.96□□□□□ -1.62
CDHR3-214ENST00000496633 IGKV3OR2-268A0A0C4DH90 116 aa4.96□□□□□ -1.62
CDHR3-214ENST00000496633 F8WDY8 70 aa4.96□□□□□ -1.62
CDHR3-214ENST00000496633 NPYP01303 97 aa4.96□□□□□ -1.62
CDHR3-214ENST00000496633 PRSS1P07477 247 aa4.96□□□□□ -1.62
CDHR3-214ENST00000496633 XGP55808 180 aa4.96□□□□□ -1.62
CDHR3-214ENST00000496633 WFDC2Q14508 124 aa4.96□□□□□ -1.62
CDHR3-214ENST00000496633 PYY3Q5JQD4 70 aa4.96□□□□□ -1.62
CDHR3-214ENST00000496633 Q8N8P6 123 aa4.96□□□□□ -1.62
CDHR3-214ENST00000496633 CHAC1Q9BUX1 264 aa4.96□□□□□ -1.62
CDHR3-214ENST00000496633 GVQW2A0A096LPI5 108 aaPredicted RBP4.95□□□□□ -1.62
CDHR3-214ENST00000496633 COX7A2LO14548 114 aa4.95□□□□□ -1.62
CDHR3-214ENST00000496633 HIST1H2BKO60814 126 aa4.95□□□□□ -1.62
CDHR3-214ENST00000496633 GAS8-AS1O95177 125 aa4.95□□□□□ -1.62
CDHR3-214ENST00000496633 HIST1H2BJP06899 126 aa4.95□□□□□ -1.62
CDHR3-214ENST00000496633 HIST1H2BOP23527 126 aa4.95□□□□□ -1.62
CDHR3-214ENST00000496633 HIST1H2BBP33778 126 aa4.95□□□□□ -1.62
CDHR3-214ENST00000496633 XCL1P47992 114 aa4.95□□□□□ -1.62
CDHR3-214ENST00000496633 HIST1H2BDP58876 126 aa4.95□□□□□ -1.62
CDHR3-214ENST00000496633 HIST1H2BCP62807 126 aa4.95□□□□□ -1.62
CDHR3-214ENST00000496633 SEC11AP67812 179 aa4.95□□□□□ -1.62
CDHR3-214ENST00000496633 HIST2H2BEQ16778 126 aa4.95□□□□□ -1.62
CDHR3-214ENST00000496633 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.95□□□□□ -1.62
CDHR3-214ENST00000496633 HIST3H2BBQ8N257 126 aa4.95□□□□□ -1.62
CDHR3-214ENST00000496633 DEFB104AQ8WTQ1 72 aa4.95□□□□□ -1.62
CDHR3-214ENST00000496633 HIST1H2BHQ93079 126 aa4.95□□□□□ -1.62
CDHR3-214ENST00000496633 PACRGQ96M98 296 aaPredicted RBP4.95□□□□□ -1.62
CDHR3-214ENST00000496633 HIST1H2BNQ99877 126 aa4.95□□□□□ -1.62
CDHR3-214ENST00000496633 HIST1H2BMQ99879 126 aa4.95□□□□□ -1.62
CDHR3-214ENST00000496633 C2orf88Q9BSF0 95 aa4.95□□□□□ -1.62
CDHR3-214ENST00000496633 CYSLTR1Q9Y271 337 aa4.95□□□□□ -1.62
CDHR3-214ENST00000496633 RYR1P21817 5038 aa4.94□□□□□ -1.62
CDHR3-214ENST00000496633 PCP4L1A6NKN8 68 aa4.94□□□□□ -1.62
CDHR3-214ENST00000496633 FOXI1Q12951 378 aa4.94□□□□□ -1.62
CDHR3-214ENST00000496633 JOSD1Q15040 202 aaPredicted RBP4.94□□□□□ -1.62
CDHR3-214ENST00000496633 SERTAD4-AS1Q5TG53 156 aa4.94□□□□□ -1.62
CDHR3-214ENST00000496633 TMEM141Q96I45 108 aa4.94□□□□□ -1.62
CDHR3-214ENST00000496633 TGIF2-C20orf24A0A0A6YYL0 155 aa4.93□□□□□ -1.62
CDHR3-214ENST00000496633 TRAV13-1A0A0B4J241 112 aa4.93□□□□□ -1.62
CDHR3-214ENST00000496633 TEX43Q6ZNM6 134 aa4.93□□□□□ -1.62
CDHR3-214ENST00000496633 OR10D4PQ8NGN7 298 aa4.93□□□□□ -1.62
CDHR3-214ENST00000496633 PRSS3P2Q8NHM4 247 aa4.93□□□□□ -1.62
CDHR3-214ENST00000496633 PLA2G2DQ9UNK4 145 aa4.93□□□□□ -1.62
CDHR3-214ENST00000496633 APOBP04114 4563 aaKnown RBP4.92□□□□□ -1.62
CDHR3-214ENST00000496633 LOC389332A0A1B0GUA5 103 aa4.92□□□□□ -1.62
CDHR3-214ENST00000496633 TRIAP1O43715 76 aa4.92□□□□□ -1.62
CDHR3-214ENST00000496633 S100A2P29034 98 aa4.92□□□□□ -1.62
CDHR3-214ENST00000496633 FUSP35637 526 aaKnown RBP eCLIP4.92□□□□□ -1.62
CDHR3-214ENST00000496633 Q5VSD8 79 aa4.92□□□□□ -1.62
CDHR3-214ENST00000496633 C2orf66Q6UXQ4 117 aa4.92□□□□□ -1.62
CDHR3-214ENST00000496633 SDIM1Q6ZPB5 146 aa4.92□□□□□ -1.62
CDHR3-214ENST00000496633 LINC01561Q8N1V8 128 aa4.92□□□□□ -1.62
CDHR3-214ENST00000496633 C15orf56Q8N910 161 aa4.92□□□□□ -1.62
CDHR3-214ENST00000496633 DPH3Q96FX2 82 aa4.92□□□□□ -1.62
CDHR3-214ENST00000496633 C2orf48Q96LS8 159 aa4.92□□□□□ -1.62
CDHR3-214ENST00000496633 VCX2Q9H322 139 aa4.92□□□□□ -1.62
CDHR3-214ENST00000496633 HSPG2P98160 4391 aa4.92□□□□□ -1.62
CDHR3-214ENST00000496633 IGLV4-69A0A075B6H9 119 aa4.91□□□□□ -1.62
CDHR3-214ENST00000496633 RPL39P62891 51 aaKnown RBP4.91□□□□□ -1.62
CDHR3-214ENST00000496633 Q6ZUT4 128 aa4.91□□□□□ -1.62
CDHR3-214ENST00000496633 SCXQ7RTU7 201 aa4.91□□□□□ -1.62
CDHR3-214ENST00000496633 C14orf144Q96I85 54 aa4.91□□□□□ -1.62
CDHR3-214ENST00000496633 CARD19Q96LW7 228 aa4.91□□□□□ -1.62
CDHR3-214ENST00000496633 TIMM17AQ99595 171 aa4.91□□□□□ -1.62
CDHR3-214ENST00000496633 TRGC2P03986 189 aa4.9□□□□□ -1.63
CDHR3-214ENST00000496633 INAFM2P0DMQ5 153 aa4.9□□□□□ -1.63
CDHR3-214ENST00000496633 SYCNQ0VAF6 134 aa4.9□□□□□ -1.63
CDHR3-214ENST00000496633 CIRBPQ14011 172 aaKnown RBP4.9□□□□□ -1.63
CDHR3-214ENST00000496633 RNF151Q2KHN1 245 aa4.9□□□□□ -1.63
CDHR3-214ENST00000496633 FA2HQ7L5A8 372 aa4.9□□□□□ -1.63
CDHR3-214ENST00000496633 ERASQ7Z444 233 aa4.9□□□□□ -1.63
CDHR3-214ENST00000496633 CIRBP-AS1Q8TBR5 109 aa4.9□□□□□ -1.63
CDHR3-214ENST00000496633 HIST1H2BLQ99880 126 aa4.9□□□□□ -1.63
CDHR3-214ENST00000496633 IGLV4-3A0A075B6K6 122 aa4.89□□□□□ -1.63
CDHR3-214ENST00000496633 IGHV3OR16-9A0A0B4J2B5 98 aa4.89□□□□□ -1.63
CDHR3-214ENST00000496633 LOC107984640A0A0U1RRK4 108 aa4.89□□□□□ -1.63
CDHR3-214ENST00000496633 TSTD3H0UI37 97 aa4.89□□□□□ -1.63
CDHR3-214ENST00000496633 DDTP30046 118 aa4.89□□□□□ -1.63
CDHR3-214ENST00000496633 NDUFA6P56556 154 aa4.89□□□□□ -1.63
CDHR3-214ENST00000496633 HERVK_113P63121 156 aa4.89□□□□□ -1.63
CDHR3-214ENST00000496633 HIGD2BQ4VC39 106 aa4.89□□□□□ -1.63
CDHR3-214ENST00000496633 C7orf33Q8WU49 177 aa4.89□□□□□ -1.63
CDHR3-214ENST00000496633 TOMM6Q96B49 74 aa4.89□□□□□ -1.63
CDHR3-214ENST00000496633 CAMK2N2Q96S95 79 aa4.89□□□□□ -1.63
CDHR3-214ENST00000496633 ALKBH7Q9BT30 221 aaPredicted RBP4.89□□□□□ -1.63
CDHR3-214ENST00000496633 TRAPPC1Q9Y5R8 145 aa4.89□□□□□ -1.63
CDHR3-214ENST00000496633 A0A087WZ39 114 aa4.88□□□□□ -1.63
CDHR3-214ENST00000496633 LINC01546A6NGU7 62 aa4.88□□□□□ -1.63
CDHR3-214ENST00000496633 IGIPA6NJ69 53 aa4.88□□□□□ -1.63
CDHR3-214ENST00000496633 NDUFA1O15239 70 aa4.88□□□□□ -1.63
CDHR3-214ENST00000496633 SMR3BP02814 79 aaPredicted RBP4.88□□□□□ -1.63
CDHR3-214ENST00000496633 SPAG11BQ08648 103 aa4.88□□□□□ -1.63
CDHR3-214ENST00000496633 LINC01620Q4KN68 170 aa4.88□□□□□ -1.63
CDHR3-214ENST00000496633 FAM19A3Q7Z5A8 133 aa4.88□□□□□ -1.63
CDHR3-214ENST00000496633 SCGB3A1Q96QR1 104 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms