RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 F8W036 122 aa8.03□□□□□ -1.12
FN1-226ENST00000496542 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.03□□□□□ -1.12
FN1-226ENST00000496542 NPYP01303 97 aa8.03□□□□□ -1.12
FN1-226ENST00000496542 REG3GQ6UW15 175 aa8.03□□□□□ -1.12
FN1-226ENST00000496542 SPINK6Q6UWN8 80 aa8.03□□□□□ -1.12
FN1-226ENST00000496542 OPRPNQ99935 248 aaPredicted RBP8.03□□□□□ -1.12
FN1-226ENST00000496542 SPANXA1Q9NS26 97 aa8.03□□□□□ -1.12
FN1-226ENST00000496542 A0A1B0GXF2 115 aa8.02□□□□□ -1.13
FN1-226ENST00000496542 A0A1W2PNN7 141 aa8.02□□□□□ -1.13
FN1-226ENST00000496542 IFITM10A6NMD0 228 aa8.02□□□□□ -1.13
FN1-226ENST00000496542 ODF1Q14990 250 aa8.02□□□□□ -1.13
FN1-226ENST00000496542 ORAOV1Q8WV07 137 aa8.02□□□□□ -1.13
FN1-226ENST00000496542 SMDT1Q9H4I9 107 aa8.02□□□□□ -1.13
FN1-226ENST00000496542 C9orf116Q5BN46 136 aaPredicted RBP8.01□□□□□ -1.13
FN1-226ENST00000496542 OR10D4PQ8NGN7 298 aa8.01□□□□□ -1.13
FN1-226ENST00000496542 FAM104AQ969W3 186 aa8.01□□□□□ -1.13
FN1-226ENST00000496542 LRP2P98164 4655 aa8□□□□□ -1.13
FN1-226ENST00000496542 PPBPP02775 128 aa8□□□□□ -1.13
FN1-226ENST00000496542 MRPS36P82909 103 aaKnown RBP8□□□□□ -1.13
FN1-226ENST00000496542 IGHV3OR16-9A0A0B4J2B5 98 aa7.99□□□□□ -1.13
FN1-226ENST00000496542 A6NJY4 79 aa7.99□□□□□ -1.13
FN1-226ENST00000496542 MT-ND6P03923 174 aa7.99□□□□□ -1.13
FN1-226ENST00000496542 RAB5AP20339 215 aa7.99□□□□□ -1.13
FN1-226ENST00000496542 SRSF9Q13242 221 aaKnown RBP eCLIP7.99□□□□□ -1.13
FN1-226ENST00000496542 RNF151Q2KHN1 245 aa7.99□□□□□ -1.13
FN1-226ENST00000496542 ORMDL3Q8N138 153 aa7.99□□□□□ -1.13
FN1-226ENST00000496542 NDUFA1O15239 70 aa7.98□□□□□ -1.13
FN1-226ENST00000496542 TMEM136Q6ZRR5 245 aa7.98□□□□□ -1.13
FN1-226ENST00000496542 PHF5AQ7RTV0 110 aaKnown RBP7.98□□□□□ -1.13
FN1-226ENST00000496542 ATP5L2Q7Z4Y8 100 aa7.98□□□□□ -1.13
FN1-226ENST00000496542 PRELID3AQ96N28 172 aa7.98□□□□□ -1.13
FN1-226ENST00000496542 MRPL35Q9NZE8 188 aaKnown RBP7.98□□□□□ -1.13
FN1-226ENST00000496542 PSORS1C2Q9UIG4 136 aa7.98□□□□□ -1.13
FN1-226ENST00000496542 TGIF2-C20orf24A0A0A6YYL0 155 aa7.97□□□□□ -1.13
FN1-226ENST00000496542 IFI27P40305 119 aaPredicted RBP7.97□□□□□ -1.13
FN1-226ENST00000496542 KRTAP10-8P60410 259 aa7.97□□□□□ -1.13
FN1-226ENST00000496542 C10orf25Q5T742 122 aa7.97□□□□□ -1.13
FN1-226ENST00000496542 IMMP2LQ96T52 175 aa7.97□□□□□ -1.13
FN1-226ENST00000496542 F8WDY8 70 aa7.96□□□□□ -1.14
FN1-226ENST00000496542 C1orf137Q5JT78 98 aa7.96□□□□□ -1.14
FN1-226ENST00000496542 UNQ6190/PRO20217Q6UXQ8 127 aa7.96□□□□□ -1.14
FN1-226ENST00000496542 IGLV4-3A0A075B6K6 122 aa7.95□□□□□ -1.14
FN1-226ENST00000496542 LOC389332A0A1B0GUA5 103 aa7.95□□□□□ -1.14
FN1-226ENST00000496542 FAM168BA1KXE4 195 aa7.95□□□□□ -1.14
FN1-226ENST00000496542 C6orf48Q9UBA6 75 aa7.95□□□□□ -1.14
FN1-226ENST00000496542 A0A087WZ39 114 aa7.94□□□□□ -1.14
FN1-226ENST00000496542 GAGE2EQ4V326 116 aa7.94□□□□□ -1.14
FN1-226ENST00000496542 LINC00242Q5T6M2 205 aa7.94□□□□□ -1.14
FN1-226ENST00000496542 FAM19A5Q7Z5A7 132 aaPredicted RBP7.94□□□□□ -1.14
FN1-226ENST00000496542 TMEM141Q96I45 108 aa7.94□□□□□ -1.14
FN1-226ENST00000496542 MAP1LC3AQ9H492 121 aa7.94□□□□□ -1.14
FN1-226ENST00000496542 GAGE2DQ9UEU5 116 aa7.94□□□□□ -1.14
FN1-226ENST00000496542 PYGO1Q9Y3Y4 419 aa7.94□□□□□ -1.14
FN1-226ENST00000496542 MT-ND4LP03901 98 aa7.92□□□□□ -1.14
FN1-226ENST00000496542 TLX1NBP0CAT3 122 aa7.92□□□□□ -1.14
FN1-226ENST00000496542 KIAA0087Q14695 138 aa7.92□□□□□ -1.14
FN1-226ENST00000496542 TEX43Q6ZNM6 134 aa7.92□□□□□ -1.14
FN1-226ENST00000496542 C2orf88Q9BSF0 95 aa7.92□□□□□ -1.14
FN1-226ENST00000496542 LAMTOR2Q9Y2Q5 125 aa7.92□□□□□ -1.14
FN1-226ENST00000496542 PRSS47A8MTI9 375 aa7.91□□□□□ -1.14
FN1-226ENST00000496542 PNRC1Q12796 327 aaPredicted RBP7.91□□□□□ -1.14
FN1-226ENST00000496542 ZC2HC1BQ5TFG8 222 aa7.91□□□□□ -1.14
FN1-226ENST00000496542 C2orf82Q6UX34 121 aa7.91□□□□□ -1.14
FN1-226ENST00000496542 C2orf66Q6UXQ4 117 aa7.91□□□□□ -1.14
FN1-226ENST00000496542 Q8N8P6 123 aa7.91□□□□□ -1.14
FN1-226ENST00000496542 CYSLTR1Q9Y271 337 aa7.91□□□□□ -1.14
FN1-226ENST00000496542 TRBV30A0A0K0K1B3 111 aa7.9□□□□□ -1.14
FN1-226ENST00000496542 IGLV7-43P04211 117 aa7.9□□□□□ -1.14
FN1-226ENST00000496542 UBE2D1P51668 147 aa7.9□□□□□ -1.14
FN1-226ENST00000496542 Q6ZN92 141 aa7.9□□□□□ -1.14
FN1-226ENST00000496542 KRTAP11-1Q8IUC1 163 aa7.9□□□□□ -1.14
FN1-226ENST00000496542 ANAPC16Q96DE5 110 aa7.9□□□□□ -1.14
FN1-226ENST00000496542 M0QXV9 152 aa7.89□□□□□ -1.15
FN1-226ENST00000496542 RAB14P61106 215 aa7.89□□□□□ -1.15
FN1-226ENST00000496542 ORMDL2Q53FV1 153 aa7.89□□□□□ -1.15
FN1-226ENST00000496542 LINC00173Q6ZV60 143 aa7.89□□□□□ -1.15
FN1-226ENST00000496542 DIRC1Q969H9 104 aa7.89□□□□□ -1.15
FN1-226ENST00000496542 PACRGQ96M98 296 aaPredicted RBP7.89□□□□□ -1.15
FN1-226ENST00000496542 RNF213Q63HN8 5207 aa7.88□□□□□ -1.15
FN1-226ENST00000496542 NDUFC2-KCTD14E9PQ53 114 aa7.88□□□□□ -1.15
FN1-226ENST00000496542 UBE2BP63146 152 aa7.88□□□□□ -1.15
FN1-226ENST00000496542 KRTAP7-1Q8IUC3 87 aa7.88□□□□□ -1.15
FN1-226ENST00000496542 VCX2Q9H322 139 aa7.88□□□□□ -1.15
FN1-226ENST00000496542 TOMM7Q9P0U1 55 aa7.88□□□□□ -1.15
FN1-226ENST00000496542 PRSS2P07478 247 aa7.87□□□□□ -1.15
FN1-226ENST00000496542 LCE2AQ5TA79 106 aaPredicted RBP7.87□□□□□ -1.15
FN1-226ENST00000496542 LINC01561Q8N1V8 128 aa7.87□□□□□ -1.15
FN1-226ENST00000496542 AMELXQ99217 191 aa7.87□□□□□ -1.15
FN1-226ENST00000496542 CTDSP1Q9GZU7 261 aa7.87□□□□□ -1.15
FN1-226ENST00000496542 LOC100996750A0A140TA64 210 aa7.86□□□□□ -1.15
FN1-226ENST00000496542 H0Y9J4 135 aa7.86□□□□□ -1.15
FN1-226ENST00000496542 CKS1BP61024 79 aa7.86□□□□□ -1.15
FN1-226ENST00000496542 C9orf129Q5T035 196 aaKnown RBP7.86□□□□□ -1.15
FN1-226ENST00000496542 PRR26Q8N8Z3 221 aa7.86□□□□□ -1.15
FN1-226ENST00000496542 KRTAP4-6Q9BYQ5 205 aa7.86□□□□□ -1.15
FN1-226ENST00000496542 NXT2Q9NPJ8 142 aaKnown RBP7.86□□□□□ -1.15
FN1-226ENST00000496542 IGIPA6NJ69 53 aa7.85□□□□□ -1.15
FN1-226ENST00000496542 NPSP0C0P6 89 aa7.85□□□□□ -1.15
FN1-226ENST00000496542 K7EMI3 77 aa7.84□□□□□ -1.15
FN1-226ENST00000496542 C6orf226Q5I0X4 101 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms