RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 MRPS36P82909 103 aaKnown RBP5.49□□□□□ -1.53
SMARCD3-215ENST00000496530 BAALCQ8WXS3 180 aa5.49□□□□□ -1.53
SMARCD3-215ENST00000496530 GEMIN7Q9H840 131 aaKnown RBP5.49□□□□□ -1.53
SMARCD3-215ENST00000496530 A0A0J9YXV3 536 aa5.48□□□□□ -1.53
SMARCD3-215ENST00000496530 GAGE12HA6NDE8 117 aa5.48□□□□□ -1.53
SMARCD3-215ENST00000496530 C16orf90A8MZG2 172 aa5.48□□□□□ -1.53
SMARCD3-215ENST00000496530 CCL25O15444 150 aa5.48□□□□□ -1.53
SMARCD3-215ENST00000496530 C3orf79P0CE67 100 aa5.48□□□□□ -1.53
SMARCD3-215ENST00000496530 AKR1D1P51857 326 aa5.48□□□□□ -1.53
SMARCD3-215ENST00000496530 ANKRD39Q53RE8 183 aa5.48□□□□□ -1.53
SMARCD3-215ENST00000496530 SPATA12Q7Z6I5 190 aa5.48□□□□□ -1.53
SMARCD3-215ENST00000496530 HIST1H2BLQ99880 126 aa5.48□□□□□ -1.53
SMARCD3-215ENST00000496530 PMCHL2Q9BQD1 86 aa5.48□□□□□ -1.53
SMARCD3-215ENST00000496530 TRAV8-4A0A0B4J246 113 aa5.47□□□□□ -1.53
SMARCD3-215ENST00000496530 XP32Q5T750 250 aa5.47□□□□□ -1.53
SMARCD3-215ENST00000496530 CDPF1Q6NVV7 123 aa5.47□□□□□ -1.53
SMARCD3-215ENST00000496530 Q6ZRN7 208 aaPredicted RBP5.47□□□□□ -1.53
SMARCD3-215ENST00000496530 C5orf38Q86SI9 138 aa5.47□□□□□ -1.53
SMARCD3-215ENST00000496530 CHCHD10Q8WYQ3 142 aaPredicted RBP5.47□□□□□ -1.53
SMARCD3-215ENST00000496530 PACRGQ96M98 296 aaPredicted RBP5.47□□□□□ -1.53
SMARCD3-215ENST00000496530 AMELXQ99217 191 aa5.47□□□□□ -1.53
SMARCD3-215ENST00000496530 C1orf43Q9BWL3 253 aa5.47□□□□□ -1.53
SMARCD3-215ENST00000496530 PGPEP1Q9NXJ5 209 aa5.47□□□□□ -1.53
SMARCD3-215ENST00000496530 C20orf202A1L168 122 aa5.46□□□□□ -1.54
SMARCD3-215ENST00000496530 SYS1-DBNDD2H3BUS1 97 aa5.46□□□□□ -1.54
SMARCD3-215ENST00000496530 NPSP0C0P6 89 aa5.46□□□□□ -1.54
SMARCD3-215ENST00000496530 MALP21145 153 aa5.46□□□□□ -1.54
SMARCD3-215ENST00000496530 COX6A2Q02221 97 aa5.46□□□□□ -1.54
SMARCD3-215ENST00000496530 MIAQ16674 131 aa5.46□□□□□ -1.54
SMARCD3-215ENST00000496530 TMEM170BQ5T4T1 132 aa5.46□□□□□ -1.54
SMARCD3-215ENST00000496530 PET117Q6UWS5 81 aa5.46□□□□□ -1.54
SMARCD3-215ENST00000496530 FAM104AQ969W3 186 aa5.46□□□□□ -1.54
SMARCD3-215ENST00000496530 A0A087WTM6 91 aa5.45□□□□□ -1.54
SMARCD3-215ENST00000496530 UBE2D1P51668 147 aa5.45□□□□□ -1.54
SMARCD3-215ENST00000496530 SEC11AP67812 179 aa5.45□□□□□ -1.54
SMARCD3-215ENST00000496530 LINC00469Q8N7U9 141 aa5.45□□□□□ -1.54
SMARCD3-215ENST00000496530 MRPL35Q9NZE8 188 aaKnown RBP5.45□□□□□ -1.54
SMARCD3-215ENST00000496530 TRAV12-1A0A0B4J245 112 aa5.44□□□□□ -1.54
SMARCD3-215ENST00000496530 TINCRA0A1B0GVN0 87 aa5.44□□□□□ -1.54
SMARCD3-215ENST00000496530 COX7A2LO14548 114 aa5.44□□□□□ -1.54
SMARCD3-215ENST00000496530 DPM2O94777 84 aa5.44□□□□□ -1.54
SMARCD3-215ENST00000496530 IGKCP01834 107 aa5.44□□□□□ -1.54
SMARCD3-215ENST00000496530 LINC00242Q5T6M2 205 aa5.44□□□□□ -1.54
SMARCD3-215ENST00000496530 CD164L2Q6UWJ8 174 aa5.44□□□□□ -1.54
SMARCD3-215ENST00000496530 ATOH7Q8N100 152 aa5.44□□□□□ -1.54
SMARCD3-215ENST00000496530 NTN5Q8WTR8 489 aaPredicted RBP5.44□□□□□ -1.54
SMARCD3-215ENST00000496530 PRR34Q9NV39 138 aa5.44□□□□□ -1.54
SMARCD3-215ENST00000496530 DNAH6Q9C0G6 4158 aa5.44□□□□□ -1.54
SMARCD3-215ENST00000496530 IGHV3-64A0A075B6Q5 118 aa5.43□□□□□ -1.54
SMARCD3-215ENST00000496530 F8VRH5 84 aa5.43□□□□□ -1.54
SMARCD3-215ENST00000496530 H3BRM9 83 aa5.43□□□□□ -1.54
SMARCD3-215ENST00000496530 LECT2O14960 151 aa5.43□□□□□ -1.54
SMARCD3-215ENST00000496530 HERVK_113P63121 156 aa5.43□□□□□ -1.54
SMARCD3-215ENST00000496530 C14orf177Q52M58 125 aa5.43□□□□□ -1.54
SMARCD3-215ENST00000496530 TOMM7Q9P0U1 55 aa5.43□□□□□ -1.54
SMARCD3-215ENST00000496530 IGLV5-52A0A0A0MRZ9 124 aa5.42□□□□□ -1.54
SMARCD3-215ENST00000496530 C11orf86A6NJI1 115 aa5.42□□□□□ -1.54
SMARCD3-215ENST00000496530 APOMO95445 188 aa5.42□□□□□ -1.54
SMARCD3-215ENST00000496530 PRSS2P07478 247 aa5.42□□□□□ -1.54
SMARCD3-215ENST00000496530 SPINK8P0C7L1 97 aa5.42□□□□□ -1.54
SMARCD3-215ENST00000496530 C6orf226Q5I0X4 101 aa5.42□□□□□ -1.54
SMARCD3-215ENST00000496530 Q8N814 137 aa5.42□□□□□ -1.54
SMARCD3-215ENST00000496530 CHAC1Q9BUX1 264 aa5.42□□□□□ -1.54
SMARCD3-215ENST00000496530 CDKN2A-AS1Q9UH64 79 aa5.42□□□□□ -1.54
SMARCD3-215ENST00000496530 VPS13DQ5THJ4 4388 aa5.41□□□□□ -1.54
SMARCD3-215ENST00000496530 HSBP1L1C9JCN9 74 aa5.41□□□□□ -1.54
SMARCD3-215ENST00000496530 PLNP26678 52 aa5.41□□□□□ -1.54
SMARCD3-215ENST00000496530 KRTAP10-2P60368 255 aa5.41□□□□□ -1.54
SMARCD3-215ENST00000496530 FOXI1Q12951 378 aa5.41□□□□□ -1.54
SMARCD3-215ENST00000496530 STPG4Q8N801 248 aa5.41□□□□□ -1.54
SMARCD3-215ENST00000496530 IGLV4-69A0A075B6H9 119 aa5.4□□□□□ -1.54
SMARCD3-215ENST00000496530 LRCOL1A6NCL2 159 aa5.4□□□□□ -1.54
SMARCD3-215ENST00000496530 ZNF561-AS1K7EIQ3 104 aa5.4□□□□□ -1.54
SMARCD3-215ENST00000496530 CDK2AP2O75956 126 aa5.4□□□□□ -1.54
SMARCD3-215ENST00000496530 IGLC3P0DOY3 106 aa5.4□□□□□ -1.54
SMARCD3-215ENST00000496530 ZNF22P17026 224 aaPredicted RBP5.4□□□□□ -1.54
SMARCD3-215ENST00000496530 GCSHP23434 173 aa5.4□□□□□ -1.54
SMARCD3-215ENST00000496530 HERVK_113P61574 105 aa5.4□□□□□ -1.54
SMARCD3-215ENST00000496530 HIGD2BQ4VC39 106 aa5.4□□□□□ -1.54
SMARCD3-215ENST00000496530 LINC01545Q5VT33 79 aa5.4□□□□□ -1.54
SMARCD3-215ENST00000496530 ORAOV1Q8WV07 137 aa5.4□□□□□ -1.54
SMARCD3-215ENST00000496530 LINC00526Q96FQ7 95 aa5.4□□□□□ -1.54
SMARCD3-215ENST00000496530 A0A087WZ39 114 aa5.39□□□□□ -1.55
SMARCD3-215ENST00000496530 IGHV3OR16-9A0A0B4J2B5 98 aa5.39□□□□□ -1.55
SMARCD3-215ENST00000496530 IGHV1-58A0A0C4DH39 117 aa5.39□□□□□ -1.55
SMARCD3-215ENST00000496530 hDV102S1A0JD36 115 aa5.39□□□□□ -1.55
SMARCD3-215ENST00000496530 USP17L23D6RBM5 183 aa5.39□□□□□ -1.55
SMARCD3-215ENST00000496530 JOSD1Q15040 202 aaPredicted RBP5.39□□□□□ -1.55
SMARCD3-215ENST00000496530 MAPKAPK5-AS1Q8N8E1 139 aa5.39□□□□□ -1.55
SMARCD3-215ENST00000496530 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
SMARCD3-215ENST00000496530 EPPK1P58107 5090 aaKnown RBP5.38□□□□□ -1.55
SMARCD3-215ENST00000496530 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.38□□□□□ -1.55
SMARCD3-215ENST00000496530 LOC105371267A0A1B0GV96 52 aa5.38□□□□□ -1.55
SMARCD3-215ENST00000496530 TMEM223A0PJW6 202 aa5.38□□□□□ -1.55
SMARCD3-215ENST00000496530 CKS1BP61024 79 aa5.38□□□□□ -1.55
SMARCD3-215ENST00000496530 KRTAP26-1Q6PEX3 210 aa5.38□□□□□ -1.55
SMARCD3-215ENST00000496530 FAM19A3Q7Z5A8 133 aa5.38□□□□□ -1.55
SMARCD3-215ENST00000496530 FRAS1Q86XX4 4008 aa5.38□□□□□ -1.55
SMARCD3-215ENST00000496530 EIF4EBP3O60516 100 aaPredicted RBP5.37□□□□□ -1.55
SMARCD3-215ENST00000496530 LGALS3P17931 250 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms