RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 TIMM21Q9BVV7 248 aa9.36□□□□□ -0.91
CXCL12-208ENST00000496375 K7EMI3 77 aa9.35□□□□□ -0.91
CXCL12-208ENST00000496375 C14orf177Q52M58 125 aa9.35□□□□□ -0.91
CXCL12-208ENST00000496375 CIRBP-AS1Q8TBR5 109 aa9.35□□□□□ -0.91
CXCL12-208ENST00000496375 CHCHD1Q96BP2 118 aaKnown RBP9.35□□□□□ -0.91
CXCL12-208ENST00000496375 MAP1LC3AQ9H492 121 aa9.35□□□□□ -0.91
CXCL12-208ENST00000496375 HSBP1O75506 76 aa9.34□□□□□ -0.91
CXCL12-208ENST00000496375 SMAGPQ0VAQ4 97 aa9.34□□□□□ -0.91
CXCL12-208ENST00000496375 AMMECR1LQ6DCA0 310 aa9.34□□□□□ -0.91
CXCL12-208ENST00000496375 UBE2D4Q9Y2X8 147 aa9.34□□□□□ -0.91
CXCL12-208ENST00000496375 LINC00587B1AMM8 73 aa9.33□□□□□ -0.92
CXCL12-208ENST00000496375 KRTAP10-4P60372 401 aaPredicted RBP9.33□□□□□ -0.92
CXCL12-208ENST00000496375 RNASEKQ6P5S7 137 aaKnown RBP9.33□□□□□ -0.92
CXCL12-208ENST00000496375 Q8N8P6 123 aa9.33□□□□□ -0.92
CXCL12-208ENST00000496375 CDC42SE2Q9NRR3 84 aa9.33□□□□□ -0.92
CXCL12-208ENST00000496375 USP17L23D6RBM5 183 aa9.32□□□□□ -0.92
CXCL12-208ENST00000496375 CLPSL2Q6UWE3 100 aa9.32□□□□□ -0.92
CXCL12-208ENST00000496375 OR5A1Q8NGJ0 315 aa9.32□□□□□ -0.92
CXCL12-208ENST00000496375 TMEM101Q96IK0 257 aa9.32□□□□□ -0.92
CXCL12-208ENST00000496375 NXT2Q9NPJ8 142 aaKnown RBP9.31□□□□□ -0.92
CXCL12-208ENST00000496375 LINC01546A6NGU7 62 aa9.3□□□□□ -0.92
CXCL12-208ENST00000496375 LINC00614P0C842 121 aa9.3□□□□□ -0.92
CXCL12-208ENST00000496375 ZNF664Q8N3J9 261 aa9.3□□□□□ -0.92
CXCL12-208ENST00000496375 FAM104AQ969W3 186 aa9.3□□□□□ -0.92
CXCL12-208ENST00000496375 SPANXA1Q9NS26 97 aa9.3□□□□□ -0.92
CXCL12-208ENST00000496375 DDTP30046 118 aa9.29□□□□□ -0.92
CXCL12-208ENST00000496375 KRTDAPP60985 99 aa9.29□□□□□ -0.92
CXCL12-208ENST00000496375 RPL39P62891 51 aaKnown RBP9.29□□□□□ -0.92
CXCL12-208ENST00000496375 MRPS36P82909 103 aaKnown RBP9.29□□□□□ -0.92
CXCL12-208ENST00000496375 TEX43Q6ZNM6 134 aa9.29□□□□□ -0.92
CXCL12-208ENST00000496375 PYGO1Q9Y3Y4 419 aa9.29□□□□□ -0.92
CXCL12-208ENST00000496375 UBR4Q5T4S7 5183 aa9.29□□□□□ -0.92
CXCL12-208ENST00000496375 LOC389332A0A1B0GUA5 103 aa9.28□□□□□ -0.92
CXCL12-208ENST00000496375 CCL25O15444 150 aa9.28□□□□□ -0.92
CXCL12-208ENST00000496375 PRSS1P07477 247 aa9.28□□□□□ -0.92
CXCL12-208ENST00000496375 ORMDL2Q53FV1 153 aa9.28□□□□□ -0.92
CXCL12-208ENST00000496375 PRO1933Q9H354 126 aa9.28□□□□□ -0.92
CXCL12-208ENST00000496375 IGLV10-54A0A075B6I4 117 aa9.27□□□□□ -0.93
CXCL12-208ENST00000496375 LINC00959A0A1B0GUT2 108 aa9.27□□□□□ -0.93
CXCL12-208ENST00000496375 NPSP0C0P6 89 aa9.27□□□□□ -0.93
CXCL12-208ENST00000496375 IFI27P40305 119 aaPredicted RBP9.27□□□□□ -0.93
CXCL12-208ENST00000496375 CTAG1AP78358 180 aa9.27□□□□□ -0.93
CXCL12-208ENST00000496375 PMCHL1Q16048 86 aa9.27□□□□□ -0.93
CXCL12-208ENST00000496375 DGAT2L7PQ6IED9 249 aa9.27□□□□□ -0.93
CXCL12-208ENST00000496375 Q6ZUT4 128 aa9.27□□□□□ -0.93
CXCL12-208ENST00000496375 FAM19A2Q8N3H0 131 aa9.27□□□□□ -0.93
CXCL12-208ENST00000496375 C3orf79P0CE67 100 aa9.26□□□□□ -0.93
CXCL12-208ENST00000496375 C9orf163Q8N9P6 203 aa9.26□□□□□ -0.93
CXCL12-208ENST00000496375 PRSS3P2Q8NHM4 247 aa9.26□□□□□ -0.93
CXCL12-208ENST00000496375 CHCHD10Q8WYQ3 142 aaPredicted RBP9.26□□□□□ -0.93
CXCL12-208ENST00000496375 URB1-AS1Q96HZ7 61 aa9.26□□□□□ -0.93
CXCL12-208ENST00000496375 OXTP01178 125 aa9.25□□□□□ -0.93
CXCL12-208ENST00000496375 RPL37AP61513 92 aaKnown RBP9.25□□□□□ -0.93
CXCL12-208ENST00000496375 FA2HQ7L5A8 372 aa9.25□□□□□ -0.93
CXCL12-208ENST00000496375 VAMP8Q9BV40 100 aa9.25□□□□□ -0.93
CXCL12-208ENST00000496375 HSPB8Q9UJY1 196 aa9.25□□□□□ -0.93
CXCL12-208ENST00000496375 CYSLTR1Q9Y271 337 aa9.25□□□□□ -0.93
CXCL12-208ENST00000496375 G0S2P27469 103 aa9.24□□□□□ -0.93
CXCL12-208ENST00000496375 FOXI1Q12951 378 aa9.24□□□□□ -0.93
CXCL12-208ENST00000496375 C2orf66Q6UXQ4 117 aa9.24□□□□□ -0.93
CXCL12-208ENST00000496375 AP5S1Q9NUS5 200 aa9.24□□□□□ -0.93
CXCL12-208ENST00000496375 IGLV4-3A0A075B6K6 122 aa9.23□□□□□ -0.93
CXCL12-208ENST00000496375 C20orf202A1L168 122 aa9.23□□□□□ -0.93
CXCL12-208ENST00000496375 GAGE12HA6NDE8 117 aa9.23□□□□□ -0.93
CXCL12-208ENST00000496375 LINC01549A6NIU2 74 aa9.23□□□□□ -0.93
CXCL12-208ENST00000496375 IGIPA6NJ69 53 aa9.23□□□□□ -0.93
CXCL12-208ENST00000496375 LEPROTL1O95214 131 aa9.23□□□□□ -0.93
CXCL12-208ENST00000496375 SS18Q15532 418 aa9.23□□□□□ -0.93
CXCL12-208ENST00000496375 SERTAD4-AS1Q5TG53 156 aa9.23□□□□□ -0.93
CXCL12-208ENST00000496375 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.23□□□□□ -0.93
CXCL12-208ENST00000496375 IGKV3OR2-268A0A0C4DH90 116 aa9.22□□□□□ -0.93
CXCL12-208ENST00000496375 PANO1I0J062 215 aa9.22□□□□□ -0.93
CXCL12-208ENST00000496375 LBHQ53QV2 105 aaPredicted RBP9.22□□□□□ -0.93
CXCL12-208ENST00000496375 CD164L2Q6UWJ8 174 aa9.22□□□□□ -0.93
CXCL12-208ENST00000496375 C15orf56Q8N910 161 aa9.22□□□□□ -0.93
CXCL12-208ENST00000496375 TOMM6Q96B49 74 aa9.22□□□□□ -0.93
CXCL12-208ENST00000496375 HNRNPA3P51991 378 aaKnown RBP9.21□□□□□ -0.94
CXCL12-208ENST00000496375 RNASE13Q5GAN3 156 aaKnown RBP9.21□□□□□ -0.94
CXCL12-208ENST00000496375 PET117Q6UWS5 81 aa9.21□□□□□ -0.94
CXCL12-208ENST00000496375 SDIM1Q6ZPB5 146 aa9.21□□□□□ -0.94
CXCL12-208ENST00000496375 TMEM141Q96I45 108 aa9.21□□□□□ -0.94
CXCL12-208ENST00000496375 C14orf144Q96I85 54 aa9.21□□□□□ -0.94
CXCL12-208ENST00000496375 TIMM17AQ99595 171 aa9.21□□□□□ -0.94
CXCL12-208ENST00000496375 OPRPNQ99935 248 aaPredicted RBP9.21□□□□□ -0.94
CXCL12-208ENST00000496375 MIEN1Q9BRT3 115 aa9.21□□□□□ -0.94
CXCL12-208ENST00000496375 MAP1LC3CQ9BXW4 147 aa9.21□□□□□ -0.94
CXCL12-208ENST00000496375 hDV102S1A0JD36 115 aa9.2□□□□□ -0.94
CXCL12-208ENST00000496375 CNBPP62633 177 aaKnown RBP9.2□□□□□ -0.94
CXCL12-208ENST00000496375 AMELXQ99217 191 aa9.2□□□□□ -0.94
CXCL12-208ENST00000496375 GVQW2A0A096LPI5 108 aaPredicted RBP9.19□□□□□ -0.94
CXCL12-208ENST00000496375 SYS1-DBNDD2H3BUS1 97 aa9.19□□□□□ -0.94
CXCL12-208ENST00000496375 XCL1P47992 114 aa9.19□□□□□ -0.94
CXCL12-208ENST00000496375 CFAP161Q6P656 301 aa9.19□□□□□ -0.94
CXCL12-208ENST00000496375 LINC00173Q6ZV60 143 aa9.19□□□□□ -0.94
CXCL12-208ENST00000496375 PAM16Q9Y3D7 125 aa9.19□□□□□ -0.94
CXCL12-208ENST00000496375 TRAV13-1A0A0B4J241 112 aa9.18□□□□□ -0.94
CXCL12-208ENST00000496375 ERASQ7Z444 233 aa9.18□□□□□ -0.94
CXCL12-208ENST00000496375 FAM19A3Q7Z5A8 133 aa9.18□□□□□ -0.94
CXCL12-208ENST00000496375 IGHV3-64A0A075B6Q5 118 aa9.17□□□□□ -0.94
CXCL12-208ENST00000496375 A0A096LNJ9 63 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms