RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 FOXI1Q12951 378 aa12.94□□□□□ -0.34
ATG3-208ENST00000495756 MAPKAPK5-AS1Q8N8E1 139 aa12.94□□□□□ -0.34
ATG3-208ENST00000495756 SEC11AP67812 179 aa12.93□□□□□ -0.34
ATG3-208ENST00000495756 COX6A2Q02221 97 aa12.93□□□□□ -0.34
ATG3-208ENST00000495756 CHTOPQ9Y3Y2 248 aaKnown RBP12.93□□□□□ -0.34
ATG3-208ENST00000495756 SYS1-DBNDD2H3BUS1 97 aa12.92□□□□□ -0.34
ATG3-208ENST00000495756 RTL8CO15255 209 aa12.92□□□□□ -0.34
ATG3-208ENST00000495756 IGLV4-69A0A075B6H9 119 aa12.91□□□□□ -0.34
ATG3-208ENST00000495756 IGHV3OR16-9A0A0B4J2B5 98 aa12.91□□□□□ -0.34
ATG3-208ENST00000495756 TINCRA0A1B0GVN0 87 aa12.91□□□□□ -0.34
ATG3-208ENST00000495756 C3orf79P0CE67 100 aa12.91□□□□□ -0.34
ATG3-208ENST00000495756 IGLC3P0DOY3 106 aa12.91□□□□□ -0.34
ATG3-208ENST00000495756 KRTDAPP60985 99 aa12.91□□□□□ -0.34
ATG3-208ENST00000495756 HERVK_113P63121 156 aa12.91□□□□□ -0.34
ATG3-208ENST00000495756 ODF1Q14990 250 aa12.91□□□□□ -0.34
ATG3-208ENST00000495756 SPATA12Q7Z6I5 190 aa12.91□□□□□ -0.34
ATG3-208ENST00000495756 GEMIN7Q9H840 131 aaKnown RBP12.91□□□□□ -0.34
ATG3-208ENST00000495756 MRPL35Q9NZE8 188 aaKnown RBP12.91□□□□□ -0.34
ATG3-208ENST00000495756 F8VRH5 84 aa12.91□□□□□ -0.34
ATG3-208ENST00000495756 CHAC1Q9BUX1 264 aa12.9□□□□□ -0.34
ATG3-208ENST00000495756 FAT2Q9NYQ8 4349 aa12.89□□□□□ -0.35
ATG3-208ENST00000495756 COX7A2LO14548 114 aa12.89□□□□□ -0.35
ATG3-208ENST00000495756 PET117Q6UWS5 81 aa12.89□□□□□ -0.35
ATG3-208ENST00000495756 C5orf38Q86SI9 138 aa12.89□□□□□ -0.35
ATG3-208ENST00000495756 CDKN2A-AS1Q9UH64 79 aa12.88□□□□□ -0.35
ATG3-208ENST00000495756 IGLV5-45A0A087WSX0 123 aa12.87□□□□□ -0.35
ATG3-208ENST00000495756 C11orf86A6NJI1 115 aa12.87□□□□□ -0.35
ATG3-208ENST00000495756 LINC00469Q8N7U9 141 aa12.87□□□□□ -0.35
ATG3-208ENST00000495756 PMCHL2Q9BQD1 86 aa12.87□□□□□ -0.35
ATG3-208ENST00000495756 A0A087WZ39 114 aa12.86□□□□□ -0.35
ATG3-208ENST00000495756 LRCOL1A6NCL2 159 aa12.86□□□□□ -0.35
ATG3-208ENST00000495756 LINC01545Q5VT33 79 aa12.86□□□□□ -0.35
ATG3-208ENST00000495756 LECT2O14960 151 aa12.85□□□□□ -0.35
ATG3-208ENST00000495756 MALP21145 153 aa12.85□□□□□ -0.35
ATG3-208ENST00000495756 USP17L23D6RBM5 183 aa12.85□□□□□ -0.35
ATG3-208ENST00000495756 PLNP26678 52 aa12.85□□□□□ -0.35
ATG3-208ENST00000495756 TNP2Q05952 138 aa12.85□□□□□ -0.35
ATG3-208ENST00000495756 WFDC2Q14508 124 aa12.85□□□□□ -0.35
ATG3-208ENST00000495756 OR10D4PQ8NGN7 298 aa12.85□□□□□ -0.35
ATG3-208ENST00000495756 A0A087WTM6 91 aa12.84□□□□□ -0.35
ATG3-208ENST00000495756 DPM2O94777 84 aa12.84□□□□□ -0.35
ATG3-208ENST00000495756 ZNF22P17026 224 aaPredicted RBP12.84□□□□□ -0.35
ATG3-208ENST00000495756 CFAP161Q6P656 301 aa12.83□□□□□ -0.36
ATG3-208ENST00000495756 LINC01561Q8N1V8 128 aa12.83□□□□□ -0.36
ATG3-208ENST00000495756 C15orf56Q8N910 161 aa12.83□□□□□ -0.36
ATG3-208ENST00000495756 IGHV1-58A0A0C4DH39 117 aa12.82□□□□□ -0.36
ATG3-208ENST00000495756 C20orf202A1L168 122 aa12.82□□□□□ -0.36
ATG3-208ENST00000495756 H3BRM9 83 aa12.82□□□□□ -0.36
ATG3-208ENST00000495756 IGKCP01834 107 aa12.82□□□□□ -0.36
ATG3-208ENST00000495756 TMEM170BQ5T4T1 132 aa12.82□□□□□ -0.36
ATG3-208ENST00000495756 LINC00336Q6ZUF6 198 aa12.82□□□□□ -0.36
ATG3-208ENST00000495756 APOMO95445 188 aa12.81□□□□□ -0.36
ATG3-208ENST00000495756 IGHV3-64A0A075B6Q5 118 aa12.8□□□□□ -0.36
ATG3-208ENST00000495756 SMIM1B2RUZ4 78 aa12.79□□□□□ -0.36
ATG3-208ENST00000495756 SPINK8P0C7L1 97 aa12.79□□□□□ -0.36
ATG3-208ENST00000495756 DNAH11Q96DT5 4516 aa12.79□□□□□ -0.36
ATG3-208ENST00000495756 GVQW2A0A096LPI5 108 aaPredicted RBP12.78□□□□□ -0.36
ATG3-208ENST00000495756 C14orf177Q52M58 125 aa12.78□□□□□ -0.36
ATG3-208ENST00000495756 ORAOV1Q8WV07 137 aa12.78□□□□□ -0.36
ATG3-208ENST00000495756 PKD1P98161 4303 aa12.78□□□□□ -0.36
ATG3-208ENST00000495756 HIGD2BQ4VC39 106 aa12.78□□□□□ -0.36
ATG3-208ENST00000495756 HECTD4Q9Y4D8 3996 aa12.77□□□□□ -0.37
ATG3-208ENST00000495756 hDV102S1A0JD36 115 aa12.77□□□□□ -0.37
ATG3-208ENST00000495756 TMEM223A0PJW6 202 aa12.77□□□□□ -0.37
ATG3-208ENST00000495756 EREGO14944 169 aa12.77□□□□□ -0.37
ATG3-208ENST00000495756 Q8N814 137 aa12.77□□□□□ -0.37
ATG3-208ENST00000495756 IGLV5-39A0A0G2JS06 123 aa12.75□□□□□ -0.37
ATG3-208ENST00000495756 AKR1D1P51857 326 aa12.75□□□□□ -0.37
ATG3-208ENST00000495756 SPAG11BQ08648 103 aa12.75□□□□□ -0.37
ATG3-208ENST00000495756 ZNF561-AS1K7EIQ3 104 aa12.74□□□□□ -0.37
ATG3-208ENST00000495756 SCGB1D1O95968 90 aa12.74□□□□□ -0.37
ATG3-208ENST00000495756 LINC00526Q96FQ7 95 aa12.74□□□□□ -0.37
ATG3-208ENST00000495756 KIAA0087Q14695 138 aa12.73□□□□□ -0.37
ATG3-208ENST00000495756 TOMM7Q9P0U1 55 aa12.73□□□□□ -0.37
ATG3-208ENST00000495756 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.72□□□□□ -0.37
ATG3-208ENST00000495756 ATOH7Q8N100 152 aa12.72□□□□□ -0.37
ATG3-208ENST00000495756 PRSS2P07478 247 aa12.72□□□□□ -0.37
ATG3-208ENST00000495756 Q8IZM0 81 aa12.72□□□□□ -0.37
ATG3-208ENST00000495756 COX7B2Q8TF08 81 aa12.72□□□□□ -0.37
ATG3-208ENST00000495756 HERVK_113P61574 105 aa12.71□□□□□ -0.38
ATG3-208ENST00000495756 STPG4Q8N801 248 aa12.71□□□□□ -0.38
ATG3-208ENST00000495756 NTN5Q8WTR8 489 aaPredicted RBP12.71□□□□□ -0.38
ATG3-208ENST00000495756 SLPIP03973 132 aa12.7□□□□□ -0.38
ATG3-208ENST00000495756 JOSD1Q15040 202 aaPredicted RBP12.7□□□□□ -0.38
ATG3-208ENST00000495756 C6orf226Q5I0X4 101 aa12.7□□□□□ -0.38
ATG3-208ENST00000495756 C2orf48Q96LS8 159 aa12.7□□□□□ -0.38
ATG3-208ENST00000495756 CNBPP62633 177 aaKnown RBP12.68□□□□□ -0.38
ATG3-208ENST00000495756 A0A1B0GVY2 172 aa12.67□□□□□ -0.38
ATG3-208ENST00000495756 KRTAP10-2P60368 255 aa12.67□□□□□ -0.38
ATG3-208ENST00000495756 CAMK2N2Q96S95 79 aa12.67□□□□□ -0.38
ATG3-208ENST00000495756 E9PLD3 99 aa12.66□□□□□ -0.38
ATG3-208ENST00000495756 F8WDY8 70 aa12.66□□□□□ -0.38
ATG3-208ENST00000495756 LEPROTO15243 131 aa12.66□□□□□ -0.38
ATG3-208ENST00000495756 CKS1BP61024 79 aa12.66□□□□□ -0.38
ATG3-208ENST00000495756 SYCNQ0VAF6 134 aa12.66□□□□□ -0.38
ATG3-208ENST00000495756 C2orf82Q6UX34 121 aa12.66□□□□□ -0.38
ATG3-208ENST00000495756 PKHD1P08F94 4074 aa12.66□□□□□ -0.38
ATG3-208ENST00000495756 DNAH5Q8TE73 4624 aa12.66□□□□□ -0.38
ATG3-208ENST00000495756 NDUFA1O15239 70 aa12.65□□□□□ -0.38
ATG3-208ENST00000495756 FUSP35637 526 aaKnown RBP eCLIP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms