RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 C2orf48Q96LS8 159 aa8.87□□□□□ -0.99
MRPL55-232ENST00000495434 A0A096LNI7 61 aa8.86□□□□□ -0.99
MRPL55-232ENST00000495434 IGHV3OR16-9A0A0B4J2B5 98 aa8.86□□□□□ -0.99
MRPL55-232ENST00000495434 IGKV2-24A0A0C4DH68 120 aa8.86□□□□□ -0.99
MRPL55-232ENST00000495434 LOC389332A0A1B0GUA5 103 aa8.86□□□□□ -0.99
MRPL55-232ENST00000495434 F8WDY8 70 aa8.86□□□□□ -0.99
MRPL55-232ENST00000495434 OXTP01178 125 aa8.86□□□□□ -0.99
MRPL55-232ENST00000495434 C5orf38Q86SI9 138 aa8.86□□□□□ -0.99
MRPL55-232ENST00000495434 OR10D4PQ8NGN7 298 aa8.86□□□□□ -0.99
MRPL55-232ENST00000495434 OPRPNQ99935 248 aaPredicted RBP8.86□□□□□ -0.99
MRPL55-232ENST00000495434 IFITM10A6NMD0 228 aa8.85□□□□□ -0.99
MRPL55-232ENST00000495434 NPSP0C0P6 89 aa8.85□□□□□ -0.99
MRPL55-232ENST00000495434 ORMDL2Q53FV1 153 aa8.85□□□□□ -0.99
MRPL55-232ENST00000495434 STPG4Q8N801 248 aa8.85□□□□□ -0.99
MRPL55-232ENST00000495434 C7orf33Q8WU49 177 aa8.85□□□□□ -0.99
MRPL55-232ENST00000495434 TMEM141Q96I45 108 aa8.85□□□□□ -0.99
MRPL55-232ENST00000495434 NXT2Q9NPJ8 142 aaKnown RBP8.85□□□□□ -0.99
MRPL55-232ENST00000495434 IGLV4-3A0A075B6K6 122 aa8.84□□□□□ -0.99
MRPL55-232ENST00000495434 LOC107984640A0A0U1RRK4 108 aa8.84□□□□□ -0.99
MRPL55-232ENST00000495434 RNF151Q2KHN1 245 aa8.84□□□□□ -0.99
MRPL55-232ENST00000495434 Q6ZRU5 148 aa8.84□□□□□ -0.99
MRPL55-232ENST00000495434 CAMK2N2Q96S95 79 aa8.84□□□□□ -0.99
MRPL55-232ENST00000495434 CYSLTR1Q9Y271 337 aa8.84□□□□□ -0.99
MRPL55-232ENST00000495434 G0S2P27469 103 aa8.83□□□□□ -1
MRPL55-232ENST00000495434 C2orf66Q6UXQ4 117 aa8.83□□□□□ -1
MRPL55-232ENST00000495434 COMMD7Q86VX2 200 aa8.83□□□□□ -1
MRPL55-232ENST00000495434 TGIF2-C20orf24A0A0A6YYL0 155 aa8.82□□□□□ -1
MRPL55-232ENST00000495434 S100PP25815 95 aa8.82□□□□□ -1
MRPL55-232ENST00000495434 HNRNPA3P51991 378 aaKnown RBP8.82□□□□□ -1
MRPL55-232ENST00000495434 PTTG1IPP53801 180 aa8.82□□□□□ -1
MRPL55-232ENST00000495434 SPAG11BQ08648 103 aa8.82□□□□□ -1
MRPL55-232ENST00000495434 C10orf91Q5T1B1 145 aa8.82□□□□□ -1
MRPL55-232ENST00000495434 TEX43Q6ZNM6 134 aa8.82□□□□□ -1
MRPL55-232ENST00000495434 FAT3Q8TDW7 4589 aa8.82□□□□□ -1
MRPL55-232ENST00000495434 LRP1Q07954 4544 aaKnown RBP8.82□□□□□ -1
MRPL55-232ENST00000495434 A0A087WZ39 114 aa8.81□□□□□ -1
MRPL55-232ENST00000495434 COX19Q49B96 90 aa8.81□□□□□ -1
MRPL55-232ENST00000495434 LINC00242Q5T6M2 205 aa8.81□□□□□ -1
MRPL55-232ENST00000495434 Q6ZN92 141 aa8.81□□□□□ -1
MRPL55-232ENST00000495434 ORAOV1Q8WV07 137 aa8.81□□□□□ -1
MRPL55-232ENST00000495434 AMELXQ99217 191 aa8.81□□□□□ -1
MRPL55-232ENST00000495434 C2orf88Q9BSF0 95 aa8.81□□□□□ -1
MRPL55-232ENST00000495434 GNB1LQ9BYB4 327 aa8.81□□□□□ -1
MRPL55-232ENST00000495434 IGIPA6NJ69 53 aa8.8□□□□□ -1
MRPL55-232ENST00000495434 LINC01561Q8N1V8 128 aa8.8□□□□□ -1
MRPL55-232ENST00000495434 MRPL35Q9NZE8 188 aaKnown RBP8.8□□□□□ -1
MRPL55-232ENST00000495434 CARHSP1Q9Y2V2 147 aaKnown RBP8.8□□□□□ -1
MRPL55-232ENST00000495434 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.79□□□□□ -1
MRPL55-232ENST00000495434 UBE2D1P51668 147 aa8.79□□□□□ -1
MRPL55-232ENST00000495434 RHEBQ15382 184 aa8.79□□□□□ -1
MRPL55-232ENST00000495434 KIAA1644Q3SXP7 199 aa8.79□□□□□ -1
MRPL55-232ENST00000495434 PAPPA-AS1Q5QFB9 102 aa8.79□□□□□ -1
MRPL55-232ENST00000495434 VCX2Q9H322 139 aa8.79□□□□□ -1
MRPL55-232ENST00000495434 NDUFA1O15239 70 aa8.78□□□□□ -1
MRPL55-232ENST00000495434 GAGE2BQ13066 116 aa8.78□□□□□ -1
MRPL55-232ENST00000495434 LINC00173Q6ZV60 143 aa8.78□□□□□ -1
MRPL55-232ENST00000495434 FAM19A3Q7Z5A8 133 aa8.78□□□□□ -1
MRPL55-232ENST00000495434 TOMM6Q96B49 74 aa8.78□□□□□ -1
MRPL55-232ENST00000495434 TIMM17AQ99595 171 aa8.78□□□□□ -1
MRPL55-232ENST00000495434 LINC01549A6NIU2 74 aa8.77□□□□□ -1.01
MRPL55-232ENST00000495434 MT-ND6P03923 174 aa8.77□□□□□ -1.01
MRPL55-232ENST00000495434 LINC01546A6NGU7 62 aa8.76□□□□□ -1.01
MRPL55-232ENST00000495434 TLX1NBP0CAT3 122 aa8.76□□□□□ -1.01
MRPL55-232ENST00000495434 SEC11AP67812 179 aa8.76□□□□□ -1.01
MRPL55-232ENST00000495434 PRR3P79522 188 aaKnown RBP8.76□□□□□ -1.01
MRPL55-232ENST00000495434 KIAA0087Q14695 138 aa8.76□□□□□ -1.01
MRPL55-232ENST00000495434 ALKBH7Q9BT30 221 aaPredicted RBP8.76□□□□□ -1.01
MRPL55-232ENST00000495434 RPS10P5Q9NQ39 176 aa8.76□□□□□ -1.01
MRPL55-232ENST00000495434 RPL18AQ02543 176 aaKnown RBP8.75□□□□□ -1.01
MRPL55-232ENST00000495434 ERASQ7Z444 233 aa8.75□□□□□ -1.01
MRPL55-232ENST00000495434 A0A0J9YXV3 536 aa8.74□□□□□ -1.01
MRPL55-232ENST00000495434 C10orf25Q5T742 122 aa8.74□□□□□ -1.01
MRPL55-232ENST00000495434 ZC2HC1BQ5TFG8 222 aa8.74□□□□□ -1.01
MRPL55-232ENST00000495434 UNQ6190/PRO20217Q6UXQ8 127 aa8.74□□□□□ -1.01
MRPL55-232ENST00000495434 TRBV30A0A0K0K1B3 111 aa8.73□□□□□ -1.01
MRPL55-232ENST00000495434 A0A1W2PNN7 141 aa8.73□□□□□ -1.01
MRPL55-232ENST00000495434 HERVK_113P63121 156 aa8.73□□□□□ -1.01
MRPL55-232ENST00000495434 C9orf116Q5BN46 136 aaPredicted RBP8.73□□□□□ -1.01
MRPL55-232ENST00000495434 SERTAD4-AS1Q5TG53 156 aa8.73□□□□□ -1.01
MRPL55-232ENST00000495434 Q6ZRP5 223 aa8.73□□□□□ -1.01
MRPL55-232ENST00000495434 MRPL18Q9H0U6 180 aaKnown RBP8.73□□□□□ -1.01
MRPL55-232ENST00000495434 C6orf48Q9UBA6 75 aa8.73□□□□□ -1.01
MRPL55-232ENST00000495434 FABP9Q0Z7S8 132 aa8.72□□□□□ -1.01
MRPL55-232ENST00000495434 SCGB3A1Q96QR1 104 aa8.72□□□□□ -1.01
MRPL55-232ENST00000495434 PRSS2P07478 247 aa8.7□□□□□ -1.02
MRPL55-232ENST00000495434 SPINK6Q6UWN8 80 aa8.7□□□□□ -1.02
MRPL55-232ENST00000495434 FA2HQ7L5A8 372 aa8.7□□□□□ -1.02
MRPL55-232ENST00000495434 Q8IZM0 81 aa8.7□□□□□ -1.02
MRPL55-232ENST00000495434 PACRGQ96M98 296 aaPredicted RBP8.7□□□□□ -1.02
MRPL55-232ENST00000495434 GEMIN7Q9H840 131 aaKnown RBP8.7□□□□□ -1.02
MRPL55-232ENST00000495434 SNAPINO95295 136 aa8.69□□□□□ -1.02
MRPL55-232ENST00000495434 MT1HL1P0DM35 61 aa8.69□□□□□ -1.02
MRPL55-232ENST00000495434 SRSF9Q13242 221 aaKnown RBP eCLIP8.69□□□□□ -1.02
MRPL55-232ENST00000495434 NDUFA5Q16718 116 aa8.69□□□□□ -1.02
MRPL55-232ENST00000495434 C2orf82Q6UX34 121 aa8.69□□□□□ -1.02
MRPL55-232ENST00000495434 SVBPQ8N300 66 aa8.69□□□□□ -1.02
MRPL55-232ENST00000495434 SMCO4Q9NRQ5 59 aa8.69□□□□□ -1.02
MRPL55-232ENST00000495434 CDKN2A-AS1Q9UH64 79 aa8.69□□□□□ -1.02
MRPL55-232ENST00000495434 TINCRA0A1B0GVN0 87 aa8.68□□□□□ -1.02
MRPL55-232ENST00000495434 NDUFC2-KCTD14E9PQ53 114 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms