RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 COX6A2Q02221 97 aa9.16□□□□□ -0.94
SCAP-213ENST00000494938 PRSS3P2Q8NHM4 247 aa9.16□□□□□ -0.94
SCAP-213ENST00000494938 MRPL18Q9H0U6 180 aaKnown RBP9.16□□□□□ -0.94
SCAP-213ENST00000494938 CYSLTR1Q9Y271 337 aa9.16□□□□□ -0.94
SCAP-213ENST00000494938 LINC01546A6NGU7 62 aa9.15□□□□□ -0.94
SCAP-213ENST00000494938 CHTF8P0CG12 524 aa9.15□□□□□ -0.94
SCAP-213ENST00000494938 MALP21145 153 aa9.15□□□□□ -0.94
SCAP-213ENST00000494938 FABP9Q0Z7S8 132 aa9.15□□□□□ -0.94
SCAP-213ENST00000494938 ZC2HC1BQ5TFG8 222 aa9.15□□□□□ -0.94
SCAP-213ENST00000494938 SVBPQ8N300 66 aa9.15□□□□□ -0.94
SCAP-213ENST00000494938 TMEM141Q96I45 108 aa9.15□□□□□ -0.94
SCAP-213ENST00000494938 IGLV4-69A0A075B6H9 119 aa9.14□□□□□ -0.95
SCAP-213ENST00000494938 ZNF561-AS1K7EIQ3 104 aa9.14□□□□□ -0.95
SCAP-213ENST00000494938 SNAPINO95295 136 aa9.14□□□□□ -0.95
SCAP-213ENST00000494938 MT-ND6P03923 174 aa9.14□□□□□ -0.95
SCAP-213ENST00000494938 KRTAP10-4P60372 401 aaPredicted RBP9.14□□□□□ -0.95
SCAP-213ENST00000494938 LINC00242Q5T6M2 205 aa9.14□□□□□ -0.95
SCAP-213ENST00000494938 AMELXQ99217 191 aa9.14□□□□□ -0.95
SCAP-213ENST00000494938 UBE2D1P51668 147 aa9.13□□□□□ -0.95
SCAP-213ENST00000494938 SYCNQ0VAF6 134 aa9.13□□□□□ -0.95
SCAP-213ENST00000494938 NDUFA5Q16718 116 aa9.13□□□□□ -0.95
SCAP-213ENST00000494938 LINC00173Q6ZV60 143 aa9.13□□□□□ -0.95
SCAP-213ENST00000494938 SPACA4Q8TDM5 124 aa9.13□□□□□ -0.95
SCAP-213ENST00000494938 TOMM6Q96B49 74 aa9.13□□□□□ -0.95
SCAP-213ENST00000494938 YPEL4Q96NS1 127 aa9.13□□□□□ -0.95
SCAP-213ENST00000494938 PLA2G1BP04054 148 aaKnown RBP9.12□□□□□ -0.95
SCAP-213ENST00000494938 NPSP0C0P6 89 aa9.12□□□□□ -0.95
SCAP-213ENST00000494938 DPH3Q96FX2 82 aa9.12□□□□□ -0.95
SCAP-213ENST00000494938 CARD19Q96LW7 228 aa9.12□□□□□ -0.95
SCAP-213ENST00000494938 VCX2Q9H322 139 aa9.12□□□□□ -0.95
SCAP-213ENST00000494938 PKHD1L1Q86WI1 4243 aa9.11□□□□□ -0.95
SCAP-213ENST00000494938 A0A087WYN8 130 aa9.11□□□□□ -0.95
SCAP-213ENST00000494938 APOMO95445 188 aa9.11□□□□□ -0.95
SCAP-213ENST00000494938 G0S2P27469 103 aa9.11□□□□□ -0.95
SCAP-213ENST00000494938 TEX43Q6ZNM6 134 aa9.11□□□□□ -0.95
SCAP-213ENST00000494938 Q6ZRU5 148 aa9.11□□□□□ -0.95
SCAP-213ENST00000494938 C2orf48Q96LS8 159 aa9.11□□□□□ -0.95
SCAP-213ENST00000494938 A0A087WZ39 114 aa9.1□□□□□ -0.95
SCAP-213ENST00000494938 SLC7A5P1Q8MH63 180 aa9.1□□□□□ -0.95
SCAP-213ENST00000494938 TIMM17AQ99595 171 aa9.1□□□□□ -0.95
SCAP-213ENST00000494938 PLAC8Q9NZF1 115 aa9.1□□□□□ -0.95
SCAP-213ENST00000494938 TRAPPC1Q9Y5R8 145 aa9.1□□□□□ -0.95
SCAP-213ENST00000494938 HERC1Q15751 4861 aa9.1□□□□□ -0.95
SCAP-213ENST00000494938 A0A096LNI7 61 aa9.09□□□□□ -0.95
SCAP-213ENST00000494938 SPAG11BQ08648 103 aa9.09□□□□□ -0.95
SCAP-213ENST00000494938 Q6ZN92 141 aa9.09□□□□□ -0.95
SCAP-213ENST00000494938 FAM19A3Q7Z5A8 133 aa9.09□□□□□ -0.95
SCAP-213ENST00000494938 OR10D4PQ8NGN7 298 aa9.09□□□□□ -0.95
SCAP-213ENST00000494938 IGKV2-24A0A0C4DH68 120 aa9.08□□□□□ -0.96
SCAP-213ENST00000494938 KIAA0087Q14695 138 aa9.08□□□□□ -0.96
SCAP-213ENST00000494938 MAJINQ3KP22 176 aa9.08□□□□□ -0.96
SCAP-213ENST00000494938 ERASQ7Z444 233 aa9.08□□□□□ -0.96
SCAP-213ENST00000494938 ORAOV1Q8WV07 137 aa9.08□□□□□ -0.96
SCAP-213ENST00000494938 URB1-AS1Q96HZ7 61 aa9.08□□□□□ -0.96
SCAP-213ENST00000494938 SCGB3A1Q96QR1 104 aa9.08□□□□□ -0.96
SCAP-213ENST00000494938 CAMK2N2Q96S95 79 aa9.08□□□□□ -0.96
SCAP-213ENST00000494938 C2orf88Q9BSF0 95 aa9.08□□□□□ -0.96
SCAP-213ENST00000494938 FAT3Q8TDW7 4589 aa9.07□□□□□ -0.96
SCAP-213ENST00000494938 FA2HQ7L5A8 372 aa9.07□□□□□ -0.96
SCAP-213ENST00000494938 LINC01561Q8N1V8 128 aa9.07□□□□□ -0.96
SCAP-213ENST00000494938 LRP1Q07954 4544 aaKnown RBP9.07□□□□□ -0.96
SCAP-213ENST00000494938 FLG2Q5D862 2391 aaPredicted RBP9.06□□□□□ -0.96
SCAP-213ENST00000494938 A0A0J9YXV3 536 aa9.06□□□□□ -0.96
SCAP-213ENST00000494938 RNF151Q2KHN1 245 aa9.06□□□□□ -0.96
SCAP-213ENST00000494938 PAPPA-AS1Q5QFB9 102 aa9.06□□□□□ -0.96
SCAP-213ENST00000494938 C10orf25Q5T742 122 aa9.06□□□□□ -0.96
SCAP-213ENST00000494938 C18orf32Q8TCD1 76 aa9.06□□□□□ -0.96
SCAP-213ENST00000494938 F8WDY8 70 aa9.05□□□□□ -0.96
SCAP-213ENST00000494938 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.05□□□□□ -0.96
SCAP-213ENST00000494938 RPL37AP61513 92 aaKnown RBP9.05□□□□□ -0.96
SCAP-213ENST00000494938 UNQ6190/PRO20217Q6UXQ8 127 aa9.05□□□□□ -0.96
SCAP-213ENST00000494938 STPG4Q8N801 248 aa9.05□□□□□ -0.96
SCAP-213ENST00000494938 A0A096LNJ9 63 aa9.04□□□□□ -0.96
SCAP-213ENST00000494938 LOC107984640A0A0U1RRK4 108 aa9.04□□□□□ -0.96
SCAP-213ENST00000494938 LINC01549A6NIU2 74 aa9.04□□□□□ -0.96
SCAP-213ENST00000494938 LINC00614P0C842 121 aa9.04□□□□□ -0.96
SCAP-213ENST00000494938 PTTG1IPP53801 180 aa9.04□□□□□ -0.96
SCAP-213ENST00000494938 CST9LQ9H4G1 147 aa9.04□□□□□ -0.96
SCAP-213ENST00000494938 SMCO4Q9NRQ5 59 aa9.04□□□□□ -0.96
SCAP-213ENST00000494938 MRPL35Q9NZE8 188 aaKnown RBP9.04□□□□□ -0.96
SCAP-213ENST00000494938 LINC00474Q9P2X8 69 aa9.04□□□□□ -0.96
SCAP-213ENST00000494938 GAGE2BQ13066 116 aa9.03□□□□□ -0.96
SCAP-213ENST00000494938 CBLN2Q8IUK8 224 aa9.03□□□□□ -0.96
SCAP-213ENST00000494938 CDKN2A-AS1Q9UH64 79 aa9.03□□□□□ -0.96
SCAP-213ENST00000494938 PKIGQ9Y2B9 76 aa9.03□□□□□ -0.96
SCAP-213ENST00000494938 NDUFA1O15239 70 aa9.02□□□□□ -0.97
SCAP-213ENST00000494938 C6orf48Q9UBA6 75 aa9.02□□□□□ -0.97
SCAP-213ENST00000494938 A0A1W2PNN7 141 aa9.01□□□□□ -0.97
SCAP-213ENST00000494938 HNRNPA3P51991 378 aaKnown RBP9.01□□□□□ -0.97
SCAP-213ENST00000494938 HERVK_113P63121 156 aa9.01□□□□□ -0.97
SCAP-213ENST00000494938 SEC11AP67812 179 aa9.01□□□□□ -0.97
SCAP-213ENST00000494938 TINCRA0A1B0GVN0 87 aa9□□□□□ -0.97
SCAP-213ENST00000494938 PMVKQ15126 192 aa9□□□□□ -0.97
SCAP-213ENST00000494938 C2orf82Q6UX34 121 aa9□□□□□ -0.97
SCAP-213ENST00000494938 GEMIN7Q9H840 131 aaKnown RBP9□□□□□ -0.97
SCAP-213ENST00000494938 TLX1NBP0CAT3 122 aa8.99□□□□□ -0.97
SCAP-213ENST00000494938 PMCHL1Q16048 86 aa8.99□□□□□ -0.97
SCAP-213ENST00000494938 PDZD11Q5EBL8 140 aa8.99□□□□□ -0.97
SCAP-213ENST00000494938 IGLV5-45A0A087WSX0 123 aa8.98□□□□□ -0.97
SCAP-213ENST00000494938 RAB5BP61020 215 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms