RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ORAOV1Q8WV07 137 aa14.23□□□□□ -0.13
COL27A1-208ENST00000494780 SPANXA1Q9NS26 97 aa14.23□□□□□ -0.13
COL27A1-208ENST00000494780 NAT8Q9UHE5 227 aa14.23□□□□□ -0.13
COL27A1-208ENST00000494780 TNFRSF6BO95407 300 aa14.22□□□□□ -0.13
COL27A1-208ENST00000494780 C1orf137Q5JT78 98 aa14.22□□□□□ -0.13
COL27A1-208ENST00000494780 FAM104AQ969W3 186 aa14.22□□□□□ -0.13
COL27A1-208ENST00000494780 IMMP2LQ96T52 175 aa14.22□□□□□ -0.13
COL27A1-208ENST00000494780 SMIM2Q9BVW6 85 aa14.22□□□□□ -0.13
COL27A1-208ENST00000494780 RNF213Q63HN8 5207 aa14.22□□□□□ -0.13
COL27A1-208ENST00000494780 IGHV3OR16-9A0A0B4J2B5 98 aa14.21□□□□□ -0.13
COL27A1-208ENST00000494780 MRPS36P82909 103 aaKnown RBP14.21□□□□□ -0.13
COL27A1-208ENST00000494780 NDUFA1O15239 70 aa14.19□□□□□ -0.14
COL27A1-208ENST00000494780 D6R8Y8 96 aa14.18□□□□□ -0.14
COL27A1-208ENST00000494780 S100A8P05109 93 aa14.18□□□□□ -0.14
COL27A1-208ENST00000494780 HBBP68871 147 aa14.18□□□□□ -0.14
COL27A1-208ENST00000494780 C9JQL5 133 aa14.17□□□□□ -0.14
COL27A1-208ENST00000494780 F8W036 122 aa14.17□□□□□ -0.14
COL27A1-208ENST00000494780 TLX1NBP0CAT3 122 aa14.17□□□□□ -0.14
COL27A1-208ENST00000494780 IFITM10A6NMD0 228 aa14.16□□□□□ -0.14
COL27A1-208ENST00000494780 IGLV7-43P04211 117 aa14.16□□□□□ -0.14
COL27A1-208ENST00000494780 DIRC1Q969H9 104 aa14.16□□□□□ -0.14
COL27A1-208ENST00000494780 NPYP01303 97 aa14.15□□□□□ -0.14
COL27A1-208ENST00000494780 PPBPP02775 128 aa14.15□□□□□ -0.14
COL27A1-208ENST00000494780 C10orf25Q5T742 122 aa14.15□□□□□ -0.14
COL27A1-208ENST00000494780 MRPL54Q6P161 138 aaKnown RBP14.15□□□□□ -0.14
COL27A1-208ENST00000494780 A0A087WZ39 114 aa14.14□□□□□ -0.15
COL27A1-208ENST00000494780 A0A1B0GXF2 115 aa14.14□□□□□ -0.15
COL27A1-208ENST00000494780 PEA15Q15121 130 aa14.14□□□□□ -0.15
COL27A1-208ENST00000494780 UNQ6190/PRO20217Q6UXQ8 127 aa14.14□□□□□ -0.15
COL27A1-208ENST00000494780 C6orf48Q9UBA6 75 aa14.14□□□□□ -0.15
COL27A1-208ENST00000494780 TGIF2-C20orf24A0A0A6YYL0 155 aa14.13□□□□□ -0.15
COL27A1-208ENST00000494780 FAM168BA1KXE4 195 aa14.13□□□□□ -0.15
COL27A1-208ENST00000494780 SRSF3P84103 164 aaKnown RBP14.12□□□□□ -0.15
COL27A1-208ENST00000494780 SMDT1Q9H4I9 107 aa14.12□□□□□ -0.15
COL27A1-208ENST00000494780 IFI27P40305 119 aaPredicted RBP14.11□□□□□ -0.15
COL27A1-208ENST00000494780 RAB5AP20339 215 aa14.1□□□□□ -0.15
COL27A1-208ENST00000494780 GAGE2EQ4V326 116 aa14.1□□□□□ -0.15
COL27A1-208ENST00000494780 FAM19A5Q7Z5A7 132 aaPredicted RBP14.1□□□□□ -0.15
COL27A1-208ENST00000494780 KRTAP11-1Q8IUC1 163 aa14.1□□□□□ -0.15
COL27A1-208ENST00000494780 ORMDL3Q8N138 153 aa14.1□□□□□ -0.15
COL27A1-208ENST00000494780 GAGE2DQ9UEU5 116 aa14.1□□□□□ -0.15
COL27A1-208ENST00000494780 PYGO1Q9Y3Y4 419 aa14.1□□□□□ -0.15
COL27A1-208ENST00000494780 H0Y9J4 135 aa14.09□□□□□ -0.15
COL27A1-208ENST00000494780 KIAA0087Q14695 138 aa14.09□□□□□ -0.15
COL27A1-208ENST00000494780 PRR26Q8N8Z3 221 aa14.09□□□□□ -0.15
COL27A1-208ENST00000494780 TMEM136Q6ZRR5 245 aa14.08□□□□□ -0.16
COL27A1-208ENST00000494780 TRBV30A0A0K0K1B3 111 aa14.07□□□□□ -0.16
COL27A1-208ENST00000494780 LINC00242Q5T6M2 205 aa14.07□□□□□ -0.16
COL27A1-208ENST00000494780 PRELID3AQ96N28 172 aa14.07□□□□□ -0.16
COL27A1-208ENST00000494780 IGLV4-3A0A075B6K6 122 aa14.06□□□□□ -0.16
COL27A1-208ENST00000494780 ATP5L2Q7Z4Y8 100 aa14.06□□□□□ -0.16
COL27A1-208ENST00000494780 KRTAP7-1Q8IUC3 87 aa14.05□□□□□ -0.16
COL27A1-208ENST00000494780 TMEM141Q96I45 108 aa14.05□□□□□ -0.16
COL27A1-208ENST00000494780 IGLV1-50A0A075B6I6 118 aa14.04□□□□□ -0.16
COL27A1-208ENST00000494780 M0QXV9 152 aa14.04□□□□□ -0.16
COL27A1-208ENST00000494780 PRSS47A8MTI9 375 aa14.03□□□□□ -0.16
COL27A1-208ENST00000494780 UBE2BP63146 152 aa14.03□□□□□ -0.16
COL27A1-208ENST00000494780 LINC01561Q8N1V8 128 aa14.03□□□□□ -0.16
COL27A1-208ENST00000494780 NDUFC2-KCTD14E9PQ53 114 aa14.02□□□□□ -0.17
COL27A1-208ENST00000494780 C2orf82Q6UX34 121 aa14.02□□□□□ -0.17
COL27A1-208ENST00000494780 TEX43Q6ZNM6 134 aa14.02□□□□□ -0.17
COL27A1-208ENST00000494780 PACRGQ96M98 296 aaPredicted RBP14.02□□□□□ -0.17
COL27A1-208ENST00000494780 LAMTOR2Q9Y2Q5 125 aa14.02□□□□□ -0.17
COL27A1-208ENST00000494780 UBE2D1P51668 147 aa14.01□□□□□ -0.17
COL27A1-208ENST00000494780 KRTAP1-4P0C5Y4 121 aa14□□□□□ -0.17
COL27A1-208ENST00000494780 C2orf88Q9BSF0 95 aa14□□□□□ -0.17
COL27A1-208ENST00000494780 C9orf129Q5T035 196 aaKnown RBP13.99□□□□□ -0.17
COL27A1-208ENST00000494780 MAP1LC3AQ9H492 121 aa13.99□□□□□ -0.17
COL27A1-208ENST00000494780 LOC389332A0A1B0GUA5 103 aa13.98□□□□□ -0.17
COL27A1-208ENST00000494780 CYSLTR1Q9Y271 337 aa13.98□□□□□ -0.17
COL27A1-208ENST00000494780 Q6ZN92 141 aa13.97□□□□□ -0.17
COL27A1-208ENST00000494780 C2orf66Q6UXQ4 117 aa13.96□□□□□ -0.17
COL27A1-208ENST00000494780 Q8N8P6 123 aa13.96□□□□□ -0.17
COL27A1-208ENST00000494780 LPAP08519 4548 aa13.96□□□□□ -0.17
COL27A1-208ENST00000494780 A0A1B0GVG6 124 aa13.95□□□□□ -0.18
COL27A1-208ENST00000494780 PRSS2P07478 247 aa13.95□□□□□ -0.18
COL27A1-208ENST00000494780 LINC00173Q6ZV60 143 aa13.95□□□□□ -0.18
COL27A1-208ENST00000494780 AMELXQ99217 191 aa13.95□□□□□ -0.18
COL27A1-208ENST00000494780 VCX2Q9H322 139 aa13.95□□□□□ -0.18
COL27A1-208ENST00000494780 NPSP0C0P6 89 aa13.94□□□□□ -0.18
COL27A1-208ENST00000494780 RPL13AP40429 203 aaKnown RBP13.94□□□□□ -0.18
COL27A1-208ENST00000494780 ZC2HC1BQ5TFG8 222 aa13.94□□□□□ -0.18
COL27A1-208ENST00000494780 CKS1BP61024 79 aa13.93□□□□□ -0.18
COL27A1-208ENST00000494780 ORMDL2Q53FV1 153 aa13.93□□□□□ -0.18
COL27A1-208ENST00000494780 FAM19A3Q7Z5A8 133 aa13.93□□□□□ -0.18
COL27A1-208ENST00000494780 TOMM7Q9P0U1 55 aa13.92□□□□□ -0.18
COL27A1-208ENST00000494780 K7EMI3 77 aa13.91□□□□□ -0.18
COL27A1-208ENST00000494780 C6orf226Q5I0X4 101 aa13.91□□□□□ -0.18
COL27A1-208ENST00000494780 Q8IZM0 81 aa13.91□□□□□ -0.18
COL27A1-208ENST00000494780 CARHSP1Q9Y2V2 147 aaKnown RBP13.91□□□□□ -0.18
COL27A1-208ENST00000494780 IGIPA6NJ69 53 aa13.9□□□□□ -0.18
COL27A1-208ENST00000494780 ZNF861PO60384 105 aa13.9□□□□□ -0.18
COL27A1-208ENST00000494780 PNRC1Q12796 327 aaPredicted RBP13.9□□□□□ -0.18
COL27A1-208ENST00000494780 ANAPC16Q96DE5 110 aa13.9□□□□□ -0.18
COL27A1-208ENST00000494780 ALKBH7Q9BT30 221 aaPredicted RBP13.89□□□□□ -0.19
COL27A1-208ENST00000494780 C22orf24Q9Y442 160 aa13.89□□□□□ -0.19
COL27A1-208ENST00000494780 NUPR1O60356 82 aa13.88□□□□□ -0.19
COL27A1-208ENST00000494780 MT-ND4LP03901 98 aa13.88□□□□□ -0.19
COL27A1-208ENST00000494780 SEC11AP67812 179 aa13.88□□□□□ -0.19
COL27A1-208ENST00000494780 LBHQ53QV2 105 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms