RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 SMIM27A0A1W2PRY6 76 aa5.14□□□□□ -1.59
RIF1-211ENST00000494333 C7orf77A4D0Y5 90 aa5.14□□□□□ -1.59
RIF1-211ENST00000494333 CCL25O15444 150 aa5.14□□□□□ -1.59
RIF1-211ENST00000494333 PPP1R17O96001 155 aa5.14□□□□□ -1.59
RIF1-211ENST00000494333 MT3P25713 68 aa5.14□□□□□ -1.59
RIF1-211ENST00000494333 FCER1GP30273 86 aa5.14□□□□□ -1.59
RIF1-211ENST00000494333 XCL1P47992 114 aa5.14□□□□□ -1.59
RIF1-211ENST00000494333 RPL37AP61513 92 aaKnown RBP5.14□□□□□ -1.59
RIF1-211ENST00000494333 SS18Q15532 418 aa5.14□□□□□ -1.59
RIF1-211ENST00000494333 MRPL51Q4U2R6 128 aaKnown RBP5.14□□□□□ -1.59
RIF1-211ENST00000494333 FAM104BQ5XKR9 115 aa5.14□□□□□ -1.59
RIF1-211ENST00000494333 ZNF664Q8N3J9 261 aa5.14□□□□□ -1.59
RIF1-211ENST00000494333 CDC42SE2Q9NRR3 84 aa5.14□□□□□ -1.59
RIF1-211ENST00000494333 SRRM2Q9UQ35 2752 aaKnown RBP5.14□□□□□ -1.59
RIF1-211ENST00000494333 LINC00862A6NCI5 91 aa5.13□□□□□ -1.59
RIF1-211ENST00000494333 CHTF8P0CG12 524 aa5.13□□□□□ -1.59
RIF1-211ENST00000494333 COX6A2Q02221 97 aa5.13□□□□□ -1.59
RIF1-211ENST00000494333 MRPL52Q86TS9 123 aaKnown RBP5.13□□□□□ -1.59
RIF1-211ENST00000494333 KIR2DL4Q99706 377 aa5.13□□□□□ -1.59
RIF1-211ENST00000494333 GVQW2A0A096LPI5 108 aaPredicted RBP5.12□□□□□ -1.59
RIF1-211ENST00000494333 A0A1B0GW15 77 aa5.12□□□□□ -1.59
RIF1-211ENST00000494333 CKS2P33552 79 aa5.12□□□□□ -1.59
RIF1-211ENST00000494333 CIRBPQ14011 172 aaKnown RBP5.12□□□□□ -1.59
RIF1-211ENST00000494333 MRPL54Q6P161 138 aaKnown RBP5.12□□□□□ -1.59
RIF1-211ENST00000494333 C20orf78Q9BR46 151 aa5.12□□□□□ -1.59
RIF1-211ENST00000494333 DMBT1Q9UGM3 2413 aaPredicted RBP5.11□□□□□ -1.59
RIF1-211ENST00000494333 TRBV24-1A0A075B6N3 115 aa5.11□□□□□ -1.59
RIF1-211ENST00000494333 PPP1R2P9O14990 202 aa5.11□□□□□ -1.59
RIF1-211ENST00000494333 SMAGPQ0VAQ4 97 aa5.11□□□□□ -1.59
RIF1-211ENST00000494333 RNASE13Q5GAN3 156 aaKnown RBP5.11□□□□□ -1.59
RIF1-211ENST00000494333 CD164L2Q6UWJ8 174 aa5.11□□□□□ -1.59
RIF1-211ENST00000494333 SPACA4Q8TDM5 124 aa5.11□□□□□ -1.59
RIF1-211ENST00000494333 LINC00526Q96FQ7 95 aa5.11□□□□□ -1.59
RIF1-211ENST00000494333 UBE2D4Q9Y2X8 147 aa5.11□□□□□ -1.59
RIF1-211ENST00000494333 CSDC2Q9Y534 153 aaKnown RBP5.11□□□□□ -1.59
RIF1-211ENST00000494333 IGHV1-58A0A0C4DH39 117 aa5.1□□□□□ -1.59
RIF1-211ENST00000494333 IGKV2-24A0A0C4DH68 120 aa5.1□□□□□ -1.59
RIF1-211ENST00000494333 C1orf196B1AJZ1 125 aa5.1□□□□□ -1.59
RIF1-211ENST00000494333 D6R8Y8 96 aa5.1□□□□□ -1.59
RIF1-211ENST00000494333 F8W036 122 aa5.1□□□□□ -1.59
RIF1-211ENST00000494333 OXTP01178 125 aa5.1□□□□□ -1.59
RIF1-211ENST00000494333 S100A8P05109 93 aa5.1□□□□□ -1.59
RIF1-211ENST00000494333 VPREB1P12018 145 aa5.1□□□□□ -1.59
RIF1-211ENST00000494333 HNRNPA3P51991 378 aaKnown RBP5.1□□□□□ -1.59
RIF1-211ENST00000494333 HBBP68871 147 aa5.1□□□□□ -1.59
RIF1-211ENST00000494333 PNRC1Q12796 327 aaPredicted RBP5.1□□□□□ -1.59
RIF1-211ENST00000494333 MAJINQ3KP22 176 aa5.1□□□□□ -1.59
RIF1-211ENST00000494333 STPG4Q8N801 248 aa5.1□□□□□ -1.59
RIF1-211ENST00000494333 TRAV13-1A0A0B4J241 112 aa5.09□□□□□ -1.59
RIF1-211ENST00000494333 A0A1B0GXF2 115 aa5.09□□□□□ -1.59
RIF1-211ENST00000494333 RAB14P61106 215 aa5.09□□□□□ -1.59
RIF1-211ENST00000494333 RPL32P62910 135 aaKnown RBP5.09□□□□□ -1.59
RIF1-211ENST00000494333 PLAC8Q9NZF1 115 aa5.09□□□□□ -1.59
RIF1-211ENST00000494333 DNAH8Q96JB1 4490 aa5.09□□□□□ -1.6
RIF1-211ENST00000494333 A0A096LNI7 61 aa5.08□□□□□ -1.6
RIF1-211ENST00000494333 SMIM1B2RUZ4 78 aa5.08□□□□□ -1.6
RIF1-211ENST00000494333 TCAPO15273 167 aa5.08□□□□□ -1.6
RIF1-211ENST00000494333 NPYP01303 97 aa5.08□□□□□ -1.6
RIF1-211ENST00000494333 PPBPP02775 128 aa5.08□□□□□ -1.6
RIF1-211ENST00000494333 RPL39P62891 51 aaKnown RBP5.08□□□□□ -1.6
RIF1-211ENST00000494333 SYCNQ0VAF6 134 aa5.08□□□□□ -1.6
RIF1-211ENST00000494333 TMEM136Q6ZRR5 245 aa5.08□□□□□ -1.6
RIF1-211ENST00000494333 Q6ZUT4 128 aa5.08□□□□□ -1.6
RIF1-211ENST00000494333 C5orf38Q86SI9 138 aa5.08□□□□□ -1.6
RIF1-211ENST00000494333 CARD19Q96LW7 228 aa5.08□□□□□ -1.6
RIF1-211ENST00000494333 OPRPNQ99935 248 aaPredicted RBP5.08□□□□□ -1.6
RIF1-211ENST00000494333 TIMM21Q9BVV7 248 aa5.08□□□□□ -1.6
RIF1-211ENST00000494333 SMIM2Q9BVW6 85 aa5.08□□□□□ -1.6
RIF1-211ENST00000494333 IGLV4-69A0A075B6H9 119 aa5.07□□□□□ -1.6
RIF1-211ENST00000494333 COX7A2LO14548 114 aa5.07□□□□□ -1.6
RIF1-211ENST00000494333 PHOX2AO14813 284 aa5.07□□□□□ -1.6
RIF1-211ENST00000494333 CFC1BP0CG36 223 aa5.07□□□□□ -1.6
RIF1-211ENST00000494333 CFC1P0CG37 223 aa5.07□□□□□ -1.6
RIF1-211ENST00000494333 RAB5AP20339 215 aa5.07□□□□□ -1.6
RIF1-211ENST00000494333 ATP5L2Q7Z4Y8 100 aa5.07□□□□□ -1.6
RIF1-211ENST00000494333 ORMDL3Q8N138 153 aa5.07□□□□□ -1.6
RIF1-211ENST00000494333 C7orf33Q8WU49 177 aa5.07□□□□□ -1.6
RIF1-211ENST00000494333 LINC00474Q9P2X8 69 aa5.07□□□□□ -1.6
RIF1-211ENST00000494333 MYCBP2O75592 4640 aa5.07□□□□□ -1.6
RIF1-211ENST00000494333 HERC1Q15751 4861 aa5.06□□□□□ -1.6
RIF1-211ENST00000494333 APOMO95445 188 aa5.06□□□□□ -1.6
RIF1-211ENST00000494333 MT-ND4LP03901 98 aa5.06□□□□□ -1.6
RIF1-211ENST00000494333 FAM104AQ969W3 186 aa5.06□□□□□ -1.6
RIF1-211ENST00000494333 PRELID3AQ96N28 172 aa5.06□□□□□ -1.6
RIF1-211ENST00000494333 CAMK2N2Q96S95 79 aa5.06□□□□□ -1.6
RIF1-211ENST00000494333 PKIGQ9Y2B9 76 aa5.06□□□□□ -1.6
RIF1-211ENST00000494333 VPS13BQ7Z7G8 4022 aa5.06□□□□□ -1.6
RIF1-211ENST00000494333 LOC389332A0A1B0GUA5 103 aa5.05□□□□□ -1.6
RIF1-211ENST00000494333 MRPS36P82909 103 aaKnown RBP5.05□□□□□ -1.6
RIF1-211ENST00000494333 Q6ZRU5 148 aa5.05□□□□□ -1.6
RIF1-211ENST00000494333 SPANXA1Q9NS26 97 aa5.05□□□□□ -1.6
RIF1-211ENST00000494333 IGHV3OR16-9A0A0B4J2B5 98 aa5.04□□□□□ -1.6
RIF1-211ENST00000494333 LOC107984640A0A0U1RRK4 108 aa5.04□□□□□ -1.6
RIF1-211ENST00000494333 IFI27P40305 119 aaPredicted RBP5.04□□□□□ -1.6
RIF1-211ENST00000494333 CLLU1Q5K131 121 aa5.04□□□□□ -1.6
RIF1-211ENST00000494333 C2orf48Q96LS8 159 aa5.04□□□□□ -1.6
RIF1-211ENST00000494333 SPAG11BQ08648 103 aa5.03□□□□□ -1.6
RIF1-211ENST00000494333 ORAOV1Q8WV07 137 aa5.03□□□□□ -1.6
RIF1-211ENST00000494333 MAP1LC3AQ9H492 121 aa5.03□□□□□ -1.6
RIF1-211ENST00000494333 LAMTOR2Q9Y2Q5 125 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms