RNA–Protein interactions for RNA: ENST00000493619.1

RTN4IP1-202, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 3

Gene RTN4IP1, Length 208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-202ENST00000493619 ESDP10768 282 aa3.69□□□□□ -1.82
RTN4IP1-202ENST00000493619 FCER1GP30273 86 aa3.69□□□□□ -1.82
RTN4IP1-202ENST00000493619 CEBPGP53567 150 aa3.69□□□□□ -1.82
RTN4IP1-202ENST00000493619 KRTAP10-4P60372 401 aaPredicted RBP3.69□□□□□ -1.82
RTN4IP1-202ENST00000493619 SPINK6Q6UWN8 80 aa3.69□□□□□ -1.82
RTN4IP1-202ENST00000493619 Q6ZRP5 223 aa3.69□□□□□ -1.82
RTN4IP1-202ENST00000493619 LINC00518Q8N0U6 118 aa3.69□□□□□ -1.82
RTN4IP1-202ENST00000493619 GATD1Q8NB37 220 aa3.69□□□□□ -1.82
RTN4IP1-202ENST00000493619 OR10D4PQ8NGN7 298 aa3.69□□□□□ -1.82
RTN4IP1-202ENST00000493619 CHCHD10Q8WYQ3 142 aaPredicted RBP3.69□□□□□ -1.82
RTN4IP1-202ENST00000493619 CARD19Q96LW7 228 aa3.69□□□□□ -1.82
RTN4IP1-202ENST00000493619 NAT8BQ9UHF3 227 aa3.69□□□□□ -1.82
RTN4IP1-202ENST00000493619 IGLV4-60A0A075B6I1 120 aa3.68□□□□□ -1.82
RTN4IP1-202ENST00000493619 IGLV5-37A0A075B6J1 123 aa3.68□□□□□ -1.82
RTN4IP1-202ENST00000493619 TRBV24-1A0A075B6N3 115 aa3.68□□□□□ -1.82
RTN4IP1-202ENST00000493619 A0A087WYN8 130 aa3.68□□□□□ -1.82
RTN4IP1-202ENST00000493619 LOC107984640A0A0U1RRK4 108 aa3.68□□□□□ -1.82
RTN4IP1-202ENST00000493619 A0A1B0GV50 99 aa3.68□□□□□ -1.82
RTN4IP1-202ENST00000493619 ZNF727A8MUV8 499 aa3.68□□□□□ -1.82
RTN4IP1-202ENST00000493619 FUSP35637 526 aaKnown RBP eCLIP3.68□□□□□ -1.82
RTN4IP1-202ENST00000493619 TMEM241Q24JQ0 296 aa3.68□□□□□ -1.82
RTN4IP1-202ENST00000493619 ATP5L2Q7Z4Y8 100 aa3.68□□□□□ -1.82
RTN4IP1-202ENST00000493619 LINC01561Q8N1V8 128 aa3.68□□□□□ -1.82
RTN4IP1-202ENST00000493619 IMMP2LQ96T52 175 aa3.68□□□□□ -1.82
RTN4IP1-202ENST00000493619 SMIM7Q9BQ49 75 aa3.68□□□□□ -1.82
RTN4IP1-202ENST00000493619 EIF5A2Q9GZV4 153 aaKnown RBP3.68□□□□□ -1.82
RTN4IP1-202ENST00000493619 SPANXA1Q9NS26 97 aa3.68□□□□□ -1.82
RTN4IP1-202ENST00000493619 FLG2Q5D862 2391 aaPredicted RBP3.68□□□□□ -1.82
RTN4IP1-202ENST00000493619 A0A087WZ39 114 aa3.67□□□□□ -1.82
RTN4IP1-202ENST00000493619 LINC00959A0A1B0GUT2 108 aa3.67□□□□□ -1.82
RTN4IP1-202ENST00000493619 HIGD1CA8MV81 97 aa3.67□□□□□ -1.82
RTN4IP1-202ENST00000493619 COX7A2LO14548 114 aa3.67□□□□□ -1.82
RTN4IP1-202ENST00000493619 PRSS2P07478 247 aa3.67□□□□□ -1.82
RTN4IP1-202ENST00000493619 POLR2KP53803 58 aaKnown RBP3.67□□□□□ -1.82
RTN4IP1-202ENST00000493619 SEC11AP67812 179 aa3.67□□□□□ -1.82
RTN4IP1-202ENST00000493619 SYCNQ0VAF6 134 aa3.67□□□□□ -1.82
RTN4IP1-202ENST00000493619 PEA15Q15121 130 aa3.67□□□□□ -1.82
RTN4IP1-202ENST00000493619 LINC01551Q86U37 167 aa3.67□□□□□ -1.82
RTN4IP1-202ENST00000493619 ZNF664Q8N3J9 261 aa3.67□□□□□ -1.82
RTN4IP1-202ENST00000493619 C15orf56Q8N910 161 aa3.67□□□□□ -1.82
RTN4IP1-202ENST00000493619 LINC01600Q96MT4 127 aa3.67□□□□□ -1.82
RTN4IP1-202ENST00000493619 RNASE7Q9H1E1 156 aaKnown RBP3.67□□□□□ -1.82
RTN4IP1-202ENST00000493619 CDC42SE2Q9NRR3 84 aa3.67□□□□□ -1.82
RTN4IP1-202ENST00000493619 IGLV9-49A0A0B4J1Y8 123 aa3.66□□□□□ -1.82
RTN4IP1-202ENST00000493619 MUC21A0A0G2JKD1 596 aa3.66□□□□□ -1.82
RTN4IP1-202ENST00000493619 MUC21A0A140T8X8 626 aa3.66□□□□□ -1.82
RTN4IP1-202ENST00000493619 K7EN84 100 aa3.66□□□□□ -1.82
RTN4IP1-202ENST00000493619 CTAG1AP78358 180 aa3.66□□□□□ -1.82
RTN4IP1-202ENST00000493619 PRR3P79522 188 aaKnown RBP3.66□□□□□ -1.82
RTN4IP1-202ENST00000493619 MRPS36P82909 103 aaKnown RBP3.66□□□□□ -1.82
RTN4IP1-202ENST00000493619 CLPSL2Q6UWE3 100 aa3.66□□□□□ -1.82
RTN4IP1-202ENST00000493619 STPG4Q8N801 248 aa3.66□□□□□ -1.82
RTN4IP1-202ENST00000493619 GTSF1Q8WW33 167 aa3.66□□□□□ -1.82
RTN4IP1-202ENST00000493619 MRPL35Q9NZE8 188 aaKnown RBP3.66□□□□□ -1.82
RTN4IP1-202ENST00000493619 NAT8Q9UHE5 227 aa3.66□□□□□ -1.82
RTN4IP1-202ENST00000493619 IGLV5-45A0A087WSX0 123 aa3.65□□□□□ -1.83
RTN4IP1-202ENST00000493619 SMLR1H3BR10 107 aa3.65□□□□□ -1.83
RTN4IP1-202ENST00000493619 TLX1NBP0CAT3 122 aa3.65□□□□□ -1.83
RTN4IP1-202ENST00000493619 RAB4AP20338 218 aa3.65□□□□□ -1.83
RTN4IP1-202ENST00000493619 HAMPP81172 84 aa3.65□□□□□ -1.83
RTN4IP1-202ENST00000493619 COX6A2Q02221 97 aa3.65□□□□□ -1.83
RTN4IP1-202ENST00000493619 PYGO1Q9Y3Y4 419 aa3.65□□□□□ -1.83
RTN4IP1-202ENST00000493619 TGIF2-C20orf24A0A0A6YYL0 155 aa3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 A0A0J9YXV3 536 aa3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 TRBV30A0A0K0K1B3 111 aa3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 SMIM27A0A1W2PRY6 76 aa3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 NDUFA1O15239 70 aa3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 TSHBP01222 138 aa3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 RAB5AP20339 215 aa3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 CKS2P33552 79 aa3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 IFI27P40305 119 aaPredicted RBP3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 RPL13AP40429 203 aaKnown RBP3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 XCL1P47992 114 aa3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 HBBP68871 147 aa3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 FAM104BQ5XKR9 115 aa3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 UQCC3Q6UW78 93 aa3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 Q6ZN92 141 aa3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 Q6ZVQ6 151 aa3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 DIRC1Q969H9 104 aa3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 CAMK2N2Q96S95 79 aa3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 C2orf88Q9BSF0 95 aa3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 PSORS1C2Q9UIG4 136 aa3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 UBE2D4Q9Y2X8 147 aa3.64□□□□□ -1.83
RTN4IP1-202ENST00000493619 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.63□□□□□ -1.83
RTN4IP1-202ENST00000493619 IGKV2-29A2NJV5 120 aaPredicted RBP3.63□□□□□ -1.83
RTN4IP1-202ENST00000493619 CXCL5P42830 114 aa3.63□□□□□ -1.83
RTN4IP1-202ENST00000493619 ORMDL3Q8N138 153 aa3.63□□□□□ -1.83
RTN4IP1-202ENST00000493619 NUP35Q8NFH5 326 aa3.63□□□□□ -1.83
RTN4IP1-202ENST00000493619 RPL39LQ96EH5 51 aaKnown RBP3.63□□□□□ -1.83
RTN4IP1-202ENST00000493619 SMIM2Q9BVW6 85 aa3.63□□□□□ -1.83
RTN4IP1-202ENST00000493619 V9GYV3 84 aa3.63□□□□□ -1.83
RTN4IP1-202ENST00000493619 TRAV26-2A0A0B4J265 109 aa3.62□□□□□ -1.83
RTN4IP1-202ENST00000493619 IGKV3OR2-268A0A0C4DH90 116 aa3.62□□□□□ -1.83
RTN4IP1-202ENST00000493619 SRP19P09132 144 aaKnown RBP3.62□□□□□ -1.83
RTN4IP1-202ENST00000493619 COX19Q49B96 90 aa3.62□□□□□ -1.83
RTN4IP1-202ENST00000493619 ORMDL2Q53FV1 153 aa3.62□□□□□ -1.83
RTN4IP1-202ENST00000493619 SFTA2Q6UW10 78 aa3.62□□□□□ -1.83
RTN4IP1-202ENST00000493619 ALKAL2Q6UX46 152 aa3.62□□□□□ -1.83
RTN4IP1-202ENST00000493619 AMN1Q8IY45 258 aa3.62□□□□□ -1.83
RTN4IP1-202ENST00000493619 NRACQ8N912 160 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms