RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 LINC00242Q5T6M2 205 aa10.98□□□□□ -0.65
RER1-208ENST00000493207 IGHV1-58A0A0C4DH39 117 aa10.97□□□□□ -0.65
RER1-208ENST00000493207 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.97□□□□□ -0.65
RER1-208ENST00000493207 LINC01620Q4KN68 170 aa10.97□□□□□ -0.65
RER1-208ENST00000493207 GVQW2A0A096LPI5 108 aaPredicted RBP10.96□□□□□ -0.65
RER1-208ENST00000493207 IGHV3OR16-9A0A0B4J2B5 98 aa10.96□□□□□ -0.65
RER1-208ENST00000493207 COX6A2Q02221 97 aa10.96□□□□□ -0.65
RER1-208ENST00000493207 PDZD11Q5EBL8 140 aa10.96□□□□□ -0.65
RER1-208ENST00000493207 LRP1BQ9NZR2 4599 aa10.94□□□□□ -0.66
RER1-208ENST00000493207 HSBP1O75506 76 aa10.94□□□□□ -0.66
RER1-208ENST00000493207 SERF1AO75920 110 aa10.94□□□□□ -0.66
RER1-208ENST00000493207 SLPIP03973 132 aa10.94□□□□□ -0.66
RER1-208ENST00000493207 LINC00310P59036 64 aa10.94□□□□□ -0.66
RER1-208ENST00000493207 CNBPP62633 177 aaKnown RBP10.94□□□□□ -0.66
RER1-208ENST00000493207 FAM19A2Q8N3H0 131 aa10.94□□□□□ -0.66
RER1-208ENST00000493207 LINC00526Q96FQ7 95 aa10.94□□□□□ -0.66
RER1-208ENST00000493207 CST9LQ9H4G1 147 aa10.94□□□□□ -0.66
RER1-208ENST00000493207 APOMO95445 188 aa10.93□□□□□ -0.66
RER1-208ENST00000493207 PMVKQ15126 192 aa10.93□□□□□ -0.66
RER1-208ENST00000493207 FAM19A3Q7Z5A8 133 aa10.93□□□□□ -0.66
RER1-208ENST00000493207 A0A0J9YXV3 536 aa10.92□□□□□ -0.66
RER1-208ENST00000493207 ZNF561-AS1K7EIQ3 104 aa10.92□□□□□ -0.66
RER1-208ENST00000493207 HIST1H2BKO60814 126 aa10.92□□□□□ -0.66
RER1-208ENST00000493207 ATP5LO75964 103 aa10.92□□□□□ -0.66
RER1-208ENST00000493207 HIST1H2BJP06899 126 aa10.92□□□□□ -0.66
RER1-208ENST00000493207 HIST1H2BOP23527 126 aa10.92□□□□□ -0.66
RER1-208ENST00000493207 HIST1H2BBP33778 126 aa10.92□□□□□ -0.66
RER1-208ENST00000493207 NDUFA6P56556 154 aa10.92□□□□□ -0.66
RER1-208ENST00000493207 HIST1H2BDP58876 126 aa10.92□□□□□ -0.66
RER1-208ENST00000493207 HIST1H2BCP62807 126 aa10.92□□□□□ -0.66
RER1-208ENST00000493207 HIST2H2BEQ16778 126 aa10.92□□□□□ -0.66
RER1-208ENST00000493207 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.92□□□□□ -0.66
RER1-208ENST00000493207 HIST1H2BHQ93079 126 aa10.92□□□□□ -0.66
RER1-208ENST00000493207 HIST1H2BNQ99877 126 aa10.92□□□□□ -0.66
RER1-208ENST00000493207 HIST1H2BMQ99879 126 aa10.92□□□□□ -0.66
RER1-208ENST00000493207 A0A087WZ39 114 aa10.91□□□□□ -0.66
RER1-208ENST00000493207 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.91□□□□□ -0.66
RER1-208ENST00000493207 NUPR1O60356 82 aa10.91□□□□□ -0.66
RER1-208ENST00000493207 HERVK_113P63121 156 aa10.91□□□□□ -0.66
RER1-208ENST00000493207 SEC11AP67812 179 aa10.91□□□□□ -0.66
RER1-208ENST00000493207 C9orf163Q8N9P6 203 aa10.91□□□□□ -0.66
RER1-208ENST00000493207 GEMIN7Q9H840 131 aaKnown RBP10.91□□□□□ -0.66
RER1-208ENST00000493207 IGLV4-69A0A075B6H9 119 aa10.9□□□□□ -0.66
RER1-208ENST00000493207 IGHV3-64A0A075B6Q5 118 aa10.9□□□□□ -0.66
RER1-208ENST00000493207 OR10D4PQ8NGN7 298 aa10.9□□□□□ -0.66
RER1-208ENST00000493207 ORAOV1Q8WV07 137 aa10.9□□□□□ -0.66
RER1-208ENST00000493207 TINCRA0A1B0GVN0 87 aa10.89□□□□□ -0.67
RER1-208ENST00000493207 CDK2AP2O75956 126 aa10.89□□□□□ -0.67
RER1-208ENST00000493207 SPAG11BQ08648 103 aa10.89□□□□□ -0.67
RER1-208ENST00000493207 IFI27L1Q96BM0 104 aa10.88□□□□□ -0.67
RER1-208ENST00000493207 FAM30AQ9NZY2 134 aa10.88□□□□□ -0.67
RER1-208ENST00000493207 CDKN2A-AS1Q9UH64 79 aa10.88□□□□□ -0.67
RER1-208ENST00000493207 LINC00469Q8N7U9 141 aa10.87□□□□□ -0.67
RER1-208ENST00000493207 KIAA1109Q2LD37 5005 aa10.87□□□□□ -0.67
RER1-208ENST00000493207 LEPROTL1O95214 131 aa10.86□□□□□ -0.67
RER1-208ENST00000493207 SYCNQ0VAF6 134 aa10.86□□□□□ -0.67
RER1-208ENST00000493207 LINC01561Q8N1V8 128 aa10.86□□□□□ -0.67
RER1-208ENST00000493207 CARD19Q96LW7 228 aa10.86□□□□□ -0.67
RER1-208ENST00000493207 CAMK2N2Q96S95 79 aa10.86□□□□□ -0.67
RER1-208ENST00000493207 IGLC3P0DOY3 106 aa10.85□□□□□ -0.67
RER1-208ENST00000493207 HAMPP81172 84 aa10.85□□□□□ -0.67
RER1-208ENST00000493207 CHAC1Q9BUX1 264 aa10.85□□□□□ -0.67
RER1-208ENST00000493207 APOBP04114 4563 aaKnown RBP10.84□□□□□ -0.67
RER1-208ENST00000493207 IGLV5-45A0A087WSX0 123 aa10.84□□□□□ -0.67
RER1-208ENST00000493207 XGP55808 180 aa10.84□□□□□ -0.67
RER1-208ENST00000493207 SDIM1Q6ZPB5 146 aa10.84□□□□□ -0.67
RER1-208ENST00000493207 Q6ZRU5 148 aa10.84□□□□□ -0.67
RER1-208ENST00000493207 Q6ZSA8 131 aa10.84□□□□□ -0.67
RER1-208ENST00000493207 C2orf48Q96LS8 159 aa10.84□□□□□ -0.67
RER1-208ENST00000493207 PACRGQ96M98 296 aaPredicted RBP10.84□□□□□ -0.67
RER1-208ENST00000493207 FABP4P15090 132 aa10.83□□□□□ -0.68
RER1-208ENST00000493207 CHTOPQ9Y3Y2 248 aaKnown RBP10.83□□□□□ -0.68
RER1-208ENST00000493207 TRAV12-1A0A0B4J245 112 aa10.82□□□□□ -0.68
RER1-208ENST00000493207 H0Y8G0 127 aa10.82□□□□□ -0.68
RER1-208ENST00000493207 KIAA0087Q14695 138 aa10.82□□□□□ -0.68
RER1-208ENST00000493207 TOMM7Q9P0U1 55 aa10.82□□□□□ -0.68
RER1-208ENST00000493207 HSPB8Q9UJY1 196 aa10.82□□□□□ -0.68
RER1-208ENST00000493207 SMIM1B2RUZ4 78 aa10.81□□□□□ -0.68
RER1-208ENST00000493207 NDUFA1O15239 70 aa10.81□□□□□ -0.68
RER1-208ENST00000493207 PRSS2P07478 247 aa10.81□□□□□ -0.68
RER1-208ENST00000493207 SPINK8P0C7L1 97 aa10.81□□□□□ -0.68
RER1-208ENST00000493207 F8WDY8 70 aa10.8□□□□□ -0.68
RER1-208ENST00000493207 H3BRM9 83 aa10.8□□□□□ -0.68
RER1-208ENST00000493207 ZNF22P17026 224 aaPredicted RBP10.8□□□□□ -0.68
RER1-208ENST00000493207 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.8□□□□□ -0.68
RER1-208ENST00000493207 RYR1P21817 5038 aa10.8□□□□□ -0.68
RER1-208ENST00000493207 DNAH8Q96JB1 4490 aa10.8□□□□□ -0.68
RER1-208ENST00000493207 HSPG2P98160 4391 aa10.79□□□□□ -0.68
RER1-208ENST00000493207 C11orf86A6NJI1 115 aa10.79□□□□□ -0.68
RER1-208ENST00000493207 PANO1I0J062 215 aa10.79□□□□□ -0.68
RER1-208ENST00000493207 C6orf226Q5I0X4 101 aa10.79□□□□□ -0.68
RER1-208ENST00000493207 C10orf25Q5T742 122 aa10.79□□□□□ -0.68
RER1-208ENST00000493207 C2orf82Q6UX34 121 aa10.79□□□□□ -0.68
RER1-208ENST00000493207 UNQ6190/PRO20217Q6UXQ8 127 aa10.79□□□□□ -0.68
RER1-208ENST00000493207 Q8IZM0 81 aa10.79□□□□□ -0.68
RER1-208ENST00000493207 CHTF8P0CG12 524 aa10.78□□□□□ -0.68
RER1-208ENST00000493207 COA6Q5JTJ3 125 aaKnown RBP10.78□□□□□ -0.68
RER1-208ENST00000493207 TMEM170BQ5T4T1 132 aa10.78□□□□□ -0.68
RER1-208ENST00000493207 SCXQ7RTU7 201 aa10.78□□□□□ -0.68
RER1-208ENST00000493207 MRPL35Q9NZE8 188 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms