RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 TRBV6-8A0A0A6YYG3 113 aa4.64□□□□□ -1.67
TPR-208ENST00000492973 IGIPA6NJ69 53 aa4.64□□□□□ -1.67
TPR-208ENST00000492973 CCL18P55774 89 aa4.64□□□□□ -1.67
TPR-208ENST00000492973 RPL39P62891 51 aaKnown RBP4.64□□□□□ -1.67
TPR-208ENST00000492973 TMEM97Q5BJF2 176 aa4.64□□□□□ -1.67
TPR-208ENST00000492973 SH2D6Q7Z4S9 175 aa4.64□□□□□ -1.67
TPR-208ENST00000492973 OR10D4PQ8NGN7 298 aa4.64□□□□□ -1.67
TPR-208ENST00000492973 MRPS16Q9Y3D3 137 aaKnown RBP4.64□□□□□ -1.67
TPR-208ENST00000492973 BIRC6Q9NR09 4857 aa4.64□□□□□ -1.67
TPR-208ENST00000492973 FAT2Q9NYQ8 4349 aa4.63□□□□□ -1.67
TPR-208ENST00000492973 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.63□□□□□ -1.67
TPR-208ENST00000492973 IGKV2-29A2NJV5 120 aaPredicted RBP4.63□□□□□ -1.67
TPR-208ENST00000492973 LINC01549A6NIU2 74 aa4.63□□□□□ -1.67
TPR-208ENST00000492973 C3orf79P0CE67 100 aa4.63□□□□□ -1.67
TPR-208ENST00000492973 ERASQ7Z444 233 aa4.63□□□□□ -1.67
TPR-208ENST00000492973 UBE2DNLQ8IWF7 75 aa4.63□□□□□ -1.67
TPR-208ENST00000492973 FAM104AQ969W3 186 aa4.63□□□□□ -1.67
TPR-208ENST00000492973 IFI27L1Q96BM0 104 aa4.63□□□□□ -1.67
TPR-208ENST00000492973 SCGB3A1Q96QR1 104 aa4.63□□□□□ -1.67
TPR-208ENST00000492973 UPK3BQ9BT76 320 aa4.63□□□□□ -1.67
TPR-208ENST00000492973 HSPB8Q9UJY1 196 aa4.63□□□□□ -1.67
TPR-208ENST00000492973 CYSLTR1Q9Y271 337 aa4.63□□□□□ -1.67
TPR-208ENST00000492973 PYGO1Q9Y3Y4 419 aa4.63□□□□□ -1.67
TPR-208ENST00000492973 TRBV25-1A0A075B6N4 114 aa4.62□□□□□ -1.67
TPR-208ENST00000492973 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.62□□□□□ -1.67
TPR-208ENST00000492973 H7C423 109 aa4.62□□□□□ -1.67
TPR-208ENST00000492973 ATP5LO75964 103 aa4.62□□□□□ -1.67
TPR-208ENST00000492973 LELP1Q5T871 98 aa4.62□□□□□ -1.67
TPR-208ENST00000492973 TMEM141Q96I45 108 aa4.62□□□□□ -1.67
TPR-208ENST00000492973 TIMM17AQ99595 171 aa4.62□□□□□ -1.67
TPR-208ENST00000492973 OPRPNQ99935 248 aaPredicted RBP4.62□□□□□ -1.67
TPR-208ENST00000492973 TMEM243Q9BU79 118 aa4.62□□□□□ -1.67
TPR-208ENST00000492973 TIMM21Q9BVV7 248 aa4.62□□□□□ -1.67
TPR-208ENST00000492973 UBE2D4Q9Y2X8 147 aa4.62□□□□□ -1.67
TPR-208ENST00000492973 FRAS1Q86XX4 4008 aa4.62□□□□□ -1.67
TPR-208ENST00000492973 EPPK1P58107 5090 aaKnown RBP4.62□□□□□ -1.67
TPR-208ENST00000492973 DYNC1H1Q14204 4646 aaKnown RBP4.61□□□□□ -1.67
TPR-208ENST00000492973 SYS1-DBNDD2H3BUS1 97 aa4.61□□□□□ -1.67
TPR-208ENST00000492973 FGF6P10767 208 aa4.61□□□□□ -1.67
TPR-208ENST00000492973 AKR1D1P51857 326 aa4.61□□□□□ -1.67
TPR-208ENST00000492973 KRTDAPP60985 99 aa4.61□□□□□ -1.67
TPR-208ENST00000492973 ZC2HC1BQ5TFG8 222 aa4.61□□□□□ -1.67
TPR-208ENST00000492973 PET117Q6UWS5 81 aa4.61□□□□□ -1.67
TPR-208ENST00000492973 Q6ZR54 194 aa4.61□□□□□ -1.67
TPR-208ENST00000492973 SPATA12Q7Z6I5 190 aa4.61□□□□□ -1.67
TPR-208ENST00000492973 MRPL52Q86TS9 123 aaKnown RBP4.61□□□□□ -1.67
TPR-208ENST00000492973 WFDC10BQ8IUB3 73 aa4.61□□□□□ -1.67
TPR-208ENST00000492973 Q8N976 141 aa4.61□□□□□ -1.67
TPR-208ENST00000492973 MAP1LC3CQ9BXW4 147 aa4.61□□□□□ -1.67
TPR-208ENST00000492973 Q9H8V8 135 aa4.61□□□□□ -1.67
TPR-208ENST00000492973 SPANXA1Q9NS26 97 aa4.61□□□□□ -1.67
TPR-208ENST00000492973 IGLV4-3A0A075B6K6 122 aa4.6□□□□□ -1.67
TPR-208ENST00000492973 NBDYA0A0U1RRE5 68 aa4.6□□□□□ -1.67
TPR-208ENST00000492973 M0R2N4 97 aa4.6□□□□□ -1.67
TPR-208ENST00000492973 UBE2L6O14933 153 aa4.6□□□□□ -1.67
TPR-208ENST00000492973 MRPS36P82909 103 aaKnown RBP4.6□□□□□ -1.67
TPR-208ENST00000492973 JOSD1Q15040 202 aaPredicted RBP4.6□□□□□ -1.67
TPR-208ENST00000492973 Q6ZN92 141 aa4.6□□□□□ -1.67
TPR-208ENST00000492973 NOTCH2NLQ7Z3S9 236 aa4.6□□□□□ -1.67
TPR-208ENST00000492973 BAALCQ8WXS3 180 aa4.6□□□□□ -1.67
TPR-208ENST00000492973 AMELXQ99217 191 aa4.6□□□□□ -1.67
TPR-208ENST00000492973 CHCHD5Q9BSY4 110 aa4.6□□□□□ -1.67
TPR-208ENST00000492973 CDC42SE2Q9NRR3 84 aa4.6□□□□□ -1.67
TPR-208ENST00000492973 CSDC2Q9Y534 153 aaKnown RBP4.6□□□□□ -1.67
TPR-208ENST00000492973 IGLV4-60A0A075B6I1 120 aa4.59□□□□□ -1.67
TPR-208ENST00000492973 A0A087WX48 190 aa4.59□□□□□ -1.67
TPR-208ENST00000492973 TRAV12-1A0A0B4J245 112 aa4.59□□□□□ -1.67
TPR-208ENST00000492973 TRAV8-6A0A0B4J262 113 aa4.59□□□□□ -1.67
TPR-208ENST00000492973 TMEM262E9PQX1 116 aa4.59□□□□□ -1.67
TPR-208ENST00000492973 SIVA1O15304 175 aa4.59□□□□□ -1.67
TPR-208ENST00000492973 DNAH10OSP0CZ25 163 aa4.59□□□□□ -1.67
TPR-208ENST00000492973 RBX1P62877 108 aa4.59□□□□□ -1.67
TPR-208ENST00000492973 SMAGPQ0VAQ4 97 aa4.59□□□□□ -1.67
TPR-208ENST00000492973 PMVKQ15126 192 aa4.59□□□□□ -1.67
TPR-208ENST00000492973 PYY3Q5JQD4 70 aa4.59□□□□□ -1.67
TPR-208ENST00000492973 LINC01545Q5VT33 79 aa4.59□□□□□ -1.67
TPR-208ENST00000492973 ZNF664Q8N3J9 261 aa4.59□□□□□ -1.67
TPR-208ENST00000492973 DNAH5Q8TE73 4624 aa4.59□□□□□ -1.67
TPR-208ENST00000492973 VCX2Q9H322 139 aa4.59□□□□□ -1.67
TPR-208ENST00000492973 CST9LQ9H4G1 147 aa4.59□□□□□ -1.67
TPR-208ENST00000492973 H0Y8G0 127 aa4.58□□□□□ -1.68
TPR-208ENST00000492973 VPREB1P12018 145 aa4.58□□□□□ -1.68
TPR-208ENST00000492973 ZNF25P17030 456 aaPredicted RBP4.58□□□□□ -1.68
TPR-208ENST00000492973 RNASE13Q5GAN3 156 aaKnown RBP4.58□□□□□ -1.68
TPR-208ENST00000492973 LINC01556Q5JQF7 62 aa4.58□□□□□ -1.68
TPR-208ENST00000492973 AMMECR1LQ6DCA0 310 aa4.58□□□□□ -1.68
TPR-208ENST00000492973 TMEM101Q96IK0 257 aa4.58□□□□□ -1.68
TPR-208ENST00000492973 IGHV3-30P01768 117 aa4.57□□□□□ -1.68
TPR-208ENST00000492973 IGHV3-33P01772 117 aa4.57□□□□□ -1.68
TPR-208ENST00000492973 IGHV3-30-3P0DP02 117 aa4.57□□□□□ -1.68
TPR-208ENST00000492973 IGHV3-30-5P0DP03 117 aa4.57□□□□□ -1.68
TPR-208ENST00000492973 PKIAP61925 76 aa4.57□□□□□ -1.68
TPR-208ENST00000492973 MPV17L2Q567V2 206 aa4.57□□□□□ -1.68
TPR-208ENST00000492973 Q6ZUT4 128 aa4.57□□□□□ -1.68
TPR-208ENST00000492973 OR5A1Q8NGJ0 315 aa4.57□□□□□ -1.68
TPR-208ENST00000492973 PMCHL2Q9BQD1 86 aa4.57□□□□□ -1.68
TPR-208ENST00000492973 CHTOPQ9Y3Y2 248 aaKnown RBP4.57□□□□□ -1.68
TPR-208ENST00000492973 HECTD4Q9Y4D8 3996 aa4.57□□□□□ -1.68
TPR-208ENST00000492973 PKD1P98161 4303 aa4.56□□□□□ -1.68
TPR-208ENST00000492973 A0A0J9YXV3 536 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms