RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 LINC00959A0A1B0GUT2 108 aa7.17□□□□□ -1.26
GPNMB-214ENST00000492858 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.17□□□□□ -1.26
GPNMB-214ENST00000492858 ATP6V1G1O75348 118 aa7.17□□□□□ -1.26
GPNMB-214ENST00000492858 TWIST1Q15672 202 aa7.17□□□□□ -1.26
GPNMB-214ENST00000492858 S100A8P05109 93 aa7.16□□□□□ -1.26
GPNMB-214ENST00000492858 RAB4AP20338 218 aa7.16□□□□□ -1.26
GPNMB-214ENST00000492858 HBBP68871 147 aa7.16□□□□□ -1.26
GPNMB-214ENST00000492858 FAM104BQ5XKR9 115 aa7.16□□□□□ -1.26
GPNMB-214ENST00000492858 TMEM136Q6ZRR5 245 aa7.16□□□□□ -1.26
GPNMB-214ENST00000492858 KRTAP11-1Q8IUC1 163 aa7.16□□□□□ -1.26
GPNMB-214ENST00000492858 H7C423 109 aa7.15□□□□□ -1.26
GPNMB-214ENST00000492858 COX19Q49B96 90 aa7.15□□□□□ -1.26
GPNMB-214ENST00000492858 CD164L2Q6UWJ8 174 aa7.15□□□□□ -1.26
GPNMB-214ENST00000492858 BORCS7Q96B45 105 aa7.15□□□□□ -1.26
GPNMB-214ENST00000492858 CAMK2N2Q96S95 79 aa7.15□□□□□ -1.26
GPNMB-214ENST00000492858 SMCO4Q9NRQ5 59 aa7.15□□□□□ -1.26
GPNMB-214ENST00000492858 TRBV6-5A0A0K0K1A5 114 aa7.14□□□□□ -1.27
GPNMB-214ENST00000492858 A6NJY4 79 aa7.14□□□□□ -1.27
GPNMB-214ENST00000492858 APCSP02743 223 aa7.14□□□□□ -1.27
GPNMB-214ENST00000492858 ZNF25P17030 456 aaPredicted RBP7.14□□□□□ -1.27
GPNMB-214ENST00000492858 SS18Q15532 418 aa7.14□□□□□ -1.27
GPNMB-214ENST00000492858 MRPL54Q6P161 138 aaKnown RBP7.14□□□□□ -1.27
GPNMB-214ENST00000492858 OPRPNQ99935 248 aaPredicted RBP7.14□□□□□ -1.27
GPNMB-214ENST00000492858 GNB1LQ9BYB4 327 aa7.14□□□□□ -1.27
GPNMB-214ENST00000492858 COLCA2A8K830 154 aa7.13□□□□□ -1.27
GPNMB-214ENST00000492858 PRSS47A8MTI9 375 aa7.13□□□□□ -1.27
GPNMB-214ENST00000492858 NCR2O95944 276 aa7.13□□□□□ -1.27
GPNMB-214ENST00000492858 MALP21145 153 aa7.13□□□□□ -1.27
GPNMB-214ENST00000492858 S100PP25815 95 aa7.13□□□□□ -1.27
GPNMB-214ENST00000492858 CBLN2Q8IUK8 224 aa7.13□□□□□ -1.27
GPNMB-214ENST00000492858 AMN1Q8IY45 258 aa7.13□□□□□ -1.27
GPNMB-214ENST00000492858 MRAP2Q96G30 205 aa7.13□□□□□ -1.27
GPNMB-214ENST00000492858 TMEM101Q96IK0 257 aa7.13□□□□□ -1.27
GPNMB-214ENST00000492858 TGIF2-C20orf24A0A0A6YYL0 155 aa7.12□□□□□ -1.27
GPNMB-214ENST00000492858 FAM168BA1KXE4 195 aa7.12□□□□□ -1.27
GPNMB-214ENST00000492858 MRPL51Q4U2R6 128 aaKnown RBP7.12□□□□□ -1.27
GPNMB-214ENST00000492858 C4orf48Q5BLP8 95 aa7.12□□□□□ -1.27
GPNMB-214ENST00000492858 NRACQ8N912 160 aa7.12□□□□□ -1.27
GPNMB-214ENST00000492858 CDIP1Q9H305 208 aa7.12□□□□□ -1.27
GPNMB-214ENST00000492858 COX7A2LO14548 114 aa7.11□□□□□ -1.27
GPNMB-214ENST00000492858 RPL32P62910 135 aaKnown RBP7.11□□□□□ -1.27
GPNMB-214ENST00000492858 SMIM15Q7Z3B0 74 aa7.11□□□□□ -1.27
GPNMB-214ENST00000492858 RPL39LQ96EH5 51 aaKnown RBP7.11□□□□□ -1.27
GPNMB-214ENST00000492858 C2orf48Q96LS8 159 aa7.11□□□□□ -1.27
GPNMB-214ENST00000492858 PPBPP02775 128 aa7.1□□□□□ -1.27
GPNMB-214ENST00000492858 POLR2KP53803 58 aaKnown RBP7.1□□□□□ -1.27
GPNMB-214ENST00000492858 FAM19A5Q7Z5A7 132 aaPredicted RBP7.1□□□□□ -1.27
GPNMB-214ENST00000492858 SCO1O75880 301 aa7.09□□□□□ -1.27
GPNMB-214ENST00000492858 UBE2BP63146 152 aa7.09□□□□□ -1.27
GPNMB-214ENST00000492858 RETNLBQ9BQ08 111 aa7.09□□□□□ -1.27
GPNMB-214ENST00000492858 LAMTOR2Q9Y2Q5 125 aa7.09□□□□□ -1.27
GPNMB-214ENST00000492858 TRBV27A0A0K0K1C4 114 aa7.08□□□□□ -1.28
GPNMB-214ENST00000492858 SDHAF1A6NFY7 115 aa7.08□□□□□ -1.28
GPNMB-214ENST00000492858 PPP1R17O96001 155 aa7.08□□□□□ -1.28
GPNMB-214ENST00000492858 ESDP10768 282 aa7.08□□□□□ -1.28
GPNMB-214ENST00000492858 C20orf78Q9BR46 151 aa7.08□□□□□ -1.28
GPNMB-214ENST00000492858 CDC42SE2Q9NRR3 84 aa7.08□□□□□ -1.28
GPNMB-214ENST00000492858 D6R8Y8 96 aa7.07□□□□□ -1.28
GPNMB-214ENST00000492858 LINC01547P58512 204 aaPredicted RBP7.07□□□□□ -1.28
GPNMB-214ENST00000492858 SPAG11BQ08648 103 aa7.07□□□□□ -1.28
GPNMB-214ENST00000492858 TPRXLQ17RH7 258 aa7.07□□□□□ -1.28
GPNMB-214ENST00000492858 RNF151Q2KHN1 245 aa7.07□□□□□ -1.28
GPNMB-214ENST00000492858 ORMDL3Q8N138 153 aa7.07□□□□□ -1.28
GPNMB-214ENST00000492858 ALKBH7Q9BT30 221 aaPredicted RBP7.07□□□□□ -1.28
GPNMB-214ENST00000492858 LINC01546A6NGU7 62 aa7.06□□□□□ -1.28
GPNMB-214ENST00000492858 C1orf196B1AJZ1 125 aa7.06□□□□□ -1.28
GPNMB-214ENST00000492858 M0QXV9 152 aa7.06□□□□□ -1.28
GPNMB-214ENST00000492858 TNFRSF6BO95407 300 aa7.06□□□□□ -1.28
GPNMB-214ENST00000492858 PMCHP20382 165 aa7.06□□□□□ -1.28
GPNMB-214ENST00000492858 C5orf38Q86SI9 138 aa7.06□□□□□ -1.28
GPNMB-214ENST00000492858 MRPL18Q9H0U6 180 aaKnown RBP7.06□□□□□ -1.28
GPNMB-214ENST00000492858 A0A087X002 238 aa7.05□□□□□ -1.28
GPNMB-214ENST00000492858 SMKR1H3BMG3 65 aa7.05□□□□□ -1.28
GPNMB-214ENST00000492858 I3L3M4 83 aa7.05□□□□□ -1.28
GPNMB-214ENST00000492858 NPYP01303 97 aa7.05□□□□□ -1.28
GPNMB-214ENST00000492858 RAB5AP20339 215 aa7.05□□□□□ -1.28
GPNMB-214ENST00000492858 CKS2P33552 79 aa7.05□□□□□ -1.28
GPNMB-214ENST00000492858 MRPL52Q86TS9 123 aaKnown RBP7.05□□□□□ -1.28
GPNMB-214ENST00000492858 KRTAP7-1Q8IUC3 87 aa7.05□□□□□ -1.28
GPNMB-214ENST00000492858 TYMSOSQ8TAI1 123 aa7.05□□□□□ -1.28
GPNMB-214ENST00000492858 MRPL35Q9NZE8 188 aaKnown RBP7.05□□□□□ -1.28
GPNMB-214ENST00000492858 TRAPPC1Q9Y5R8 145 aa7.05□□□□□ -1.28
GPNMB-214ENST00000492858 ZNF861PO60384 105 aa7.04□□□□□ -1.28
GPNMB-214ENST00000492858 TSHBP01222 138 aa7.04□□□□□ -1.28
GPNMB-214ENST00000492858 SUMO2P61956 95 aaKnown RBP7.04□□□□□ -1.28
GPNMB-214ENST00000492858 GAGE2EQ4V326 116 aa7.04□□□□□ -1.28
GPNMB-214ENST00000492858 PRELID3AQ96N28 172 aa7.04□□□□□ -1.28
GPNMB-214ENST00000492858 ST20Q9HBF5 79 aa7.04□□□□□ -1.28
GPNMB-214ENST00000492858 GAGE2DQ9UEU5 116 aa7.04□□□□□ -1.28
GPNMB-214ENST00000492858 TRAV13-1A0A0B4J241 112 aa7.03□□□□□ -1.28
GPNMB-214ENST00000492858 FABP9Q0Z7S8 132 aa7.03□□□□□ -1.28
GPNMB-214ENST00000492858 KIAA1644Q3SXP7 199 aa7.03□□□□□ -1.28
GPNMB-214ENST00000492858 IGLV7-46A0A075B6I9 117 aa7.02□□□□□ -1.29
GPNMB-214ENST00000492858 K7EMI3 77 aa7.02□□□□□ -1.29
GPNMB-214ENST00000492858 VCYO14598 125 aa7.02□□□□□ -1.29
GPNMB-214ENST00000492858 TLX1NBP0CAT3 122 aa7.02□□□□□ -1.29
GPNMB-214ENST00000492858 RNASE13Q5GAN3 156 aaKnown RBP7.02□□□□□ -1.29
GPNMB-214ENST00000492858 C10orf25Q5T742 122 aa7.02□□□□□ -1.29
GPNMB-214ENST00000492858 Q8N8P6 123 aa7.02□□□□□ -1.29
GPNMB-214ENST00000492858 SMIM2Q9BVW6 85 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms