RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 LINC00528Q8N1L1 170 aa4.58□□□□□ -1.68
PDLIM1-204ENST00000492511 PRSS3P2Q8NHM4 247 aa4.58□□□□□ -1.68
PDLIM1-204ENST00000492511 ALKBH7Q9BT30 221 aaPredicted RBP4.58□□□□□ -1.68
PDLIM1-204ENST00000492511 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.57□□□□□ -1.68
PDLIM1-204ENST00000492511 LINC01546A6NGU7 62 aa4.57□□□□□ -1.68
PDLIM1-204ENST00000492511 COX6A2Q02221 97 aa4.57□□□□□ -1.68
PDLIM1-204ENST00000492511 ORMDL2Q53FV1 153 aa4.57□□□□□ -1.68
PDLIM1-204ENST00000492511 C2orf66Q6UXQ4 117 aa4.57□□□□□ -1.68
PDLIM1-204ENST00000492511 LINC00173Q6ZV60 143 aa4.57□□□□□ -1.68
PDLIM1-204ENST00000492511 YPEL4Q96NS1 127 aa4.57□□□□□ -1.68
PDLIM1-204ENST00000492511 AMELXQ99217 191 aa4.57□□□□□ -1.68
PDLIM1-204ENST00000492511 MRPL18Q9H0U6 180 aaKnown RBP4.57□□□□□ -1.68
PDLIM1-204ENST00000492511 NXT2Q9NPJ8 142 aaKnown RBP4.57□□□□□ -1.68
PDLIM1-204ENST00000492511 IGLV4-69A0A075B6H9 119 aa4.56□□□□□ -1.68
PDLIM1-204ENST00000492511 IFITM10A6NMD0 228 aa4.56□□□□□ -1.68
PDLIM1-204ENST00000492511 K7EMI3 77 aa4.56□□□□□ -1.68
PDLIM1-204ENST00000492511 UBE2D1P51668 147 aa4.56□□□□□ -1.68
PDLIM1-204ENST00000492511 FABP9Q0Z7S8 132 aa4.56□□□□□ -1.68
PDLIM1-204ENST00000492511 LINC00242Q5T6M2 205 aa4.56□□□□□ -1.68
PDLIM1-204ENST00000492511 SPACA4Q8TDM5 124 aa4.56□□□□□ -1.68
PDLIM1-204ENST00000492511 TOMM6Q96B49 74 aa4.56□□□□□ -1.68
PDLIM1-204ENST00000492511 TMEM141Q96I45 108 aa4.56□□□□□ -1.68
PDLIM1-204ENST00000492511 CYSLTR1Q9Y271 337 aa4.56□□□□□ -1.68
PDLIM1-204ENST00000492511 FLG2Q5D862 2391 aaPredicted RBP4.56□□□□□ -1.68
PDLIM1-204ENST00000492511 TNXBP22105 4242 aa4.56□□□□□ -1.68
PDLIM1-204ENST00000492511 A0A087WYN8 130 aa4.55□□□□□ -1.68
PDLIM1-204ENST00000492511 ZNF561-AS1K7EIQ3 104 aa4.55□□□□□ -1.68
PDLIM1-204ENST00000492511 SNAPINO95295 136 aa4.55□□□□□ -1.68
PDLIM1-204ENST00000492511 MT-ND6P03923 174 aa4.55□□□□□ -1.68
PDLIM1-204ENST00000492511 MALP21145 153 aa4.55□□□□□ -1.68
PDLIM1-204ENST00000492511 SYCNQ0VAF6 134 aa4.55□□□□□ -1.68
PDLIM1-204ENST00000492511 COX19Q49B96 90 aa4.55□□□□□ -1.68
PDLIM1-204ENST00000492511 Q6ZRU5 148 aa4.55□□□□□ -1.68
PDLIM1-204ENST00000492511 SLC7A5P1Q8MH63 180 aa4.55□□□□□ -1.68
PDLIM1-204ENST00000492511 SVBPQ8N300 66 aa4.55□□□□□ -1.68
PDLIM1-204ENST00000492511 URB1-AS1Q96HZ7 61 aa4.55□□□□□ -1.68
PDLIM1-204ENST00000492511 CARD19Q96LW7 228 aa4.55□□□□□ -1.68
PDLIM1-204ENST00000492511 A0A087WZ39 114 aa4.54□□□□□ -1.68
PDLIM1-204ENST00000492511 A0A096LNI7 61 aa4.54□□□□□ -1.68
PDLIM1-204ENST00000492511 PLA2G1BP04054 148 aaKnown RBP4.54□□□□□ -1.68
PDLIM1-204ENST00000492511 NPSP0C0P6 89 aa4.54□□□□□ -1.68
PDLIM1-204ENST00000492511 KIAA0087Q14695 138 aa4.54□□□□□ -1.68
PDLIM1-204ENST00000492511 TEX43Q6ZNM6 134 aa4.54□□□□□ -1.68
PDLIM1-204ENST00000492511 FAM19A3Q7Z5A8 133 aa4.54□□□□□ -1.68
PDLIM1-204ENST00000492511 C2orf48Q96LS8 159 aa4.54□□□□□ -1.68
PDLIM1-204ENST00000492511 PLAC8Q9NZF1 115 aa4.54□□□□□ -1.68
PDLIM1-204ENST00000492511 TRAPPC1Q9Y5R8 145 aa4.54□□□□□ -1.68
PDLIM1-204ENST00000492511 A0A096LNJ9 63 aa4.53□□□□□ -1.68
PDLIM1-204ENST00000492511 IGKV2-24A0A0C4DH68 120 aa4.53□□□□□ -1.68
PDLIM1-204ENST00000492511 A0A0J9YXV3 536 aa4.53□□□□□ -1.68
PDLIM1-204ENST00000492511 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.53□□□□□ -1.68
PDLIM1-204ENST00000492511 APOMO95445 188 aa4.53□□□□□ -1.68
PDLIM1-204ENST00000492511 SPAG11BQ08648 103 aa4.53□□□□□ -1.68
PDLIM1-204ENST00000492511 NDUFA5Q16718 116 aa4.53□□□□□ -1.68
PDLIM1-204ENST00000492511 MAJINQ3KP22 176 aa4.53□□□□□ -1.68
PDLIM1-204ENST00000492511 C10orf25Q5T742 122 aa4.53□□□□□ -1.68
PDLIM1-204ENST00000492511 SERTAD4-AS1Q5TG53 156 aa4.53□□□□□ -1.68
PDLIM1-204ENST00000492511 ERASQ7Z444 233 aa4.53□□□□□ -1.68
PDLIM1-204ENST00000492511 OR10D4PQ8NGN7 298 aa4.53□□□□□ -1.68
PDLIM1-204ENST00000492511 C18orf32Q8TCD1 76 aa4.53□□□□□ -1.68
PDLIM1-204ENST00000492511 ORAOV1Q8WV07 137 aa4.53□□□□□ -1.68
PDLIM1-204ENST00000492511 DPH3Q96FX2 82 aa4.53□□□□□ -1.68
PDLIM1-204ENST00000492511 TIMM17AQ99595 171 aa4.53□□□□□ -1.68
PDLIM1-204ENST00000492511 VCX2Q9H322 139 aa4.53□□□□□ -1.68
PDLIM1-204ENST00000492511 G0S2P27469 103 aa4.52□□□□□ -1.69
PDLIM1-204ENST00000492511 HNRNPA3P51991 378 aaKnown RBP4.52□□□□□ -1.69
PDLIM1-204ENST00000492511 Q6ZN92 141 aa4.52□□□□□ -1.69
PDLIM1-204ENST00000492511 LINC01561Q8N1V8 128 aa4.52□□□□□ -1.69
PDLIM1-204ENST00000492511 SCGB3A1Q96QR1 104 aa4.52□□□□□ -1.69
PDLIM1-204ENST00000492511 CAMK2N2Q96S95 79 aa4.52□□□□□ -1.69
PDLIM1-204ENST00000492511 A0A1W2PNN7 141 aa4.51□□□□□ -1.69
PDLIM1-204ENST00000492511 LINC00614P0C842 121 aa4.51□□□□□ -1.69
PDLIM1-204ENST00000492511 PTTG1IPP53801 180 aa4.51□□□□□ -1.69
PDLIM1-204ENST00000492511 RPL37AP61513 92 aaKnown RBP4.51□□□□□ -1.69
PDLIM1-204ENST00000492511 RNF151Q2KHN1 245 aa4.51□□□□□ -1.69
PDLIM1-204ENST00000492511 UNQ6190/PRO20217Q6UXQ8 127 aa4.51□□□□□ -1.69
PDLIM1-204ENST00000492511 FA2HQ7L5A8 372 aa4.51□□□□□ -1.69
PDLIM1-204ENST00000492511 CBLN2Q8IUK8 224 aa4.51□□□□□ -1.69
PDLIM1-204ENST00000492511 STPG4Q8N801 248 aa4.51□□□□□ -1.69
PDLIM1-204ENST00000492511 C2orf88Q9BSF0 95 aa4.51□□□□□ -1.69
PDLIM1-204ENST00000492511 CST9LQ9H4G1 147 aa4.51□□□□□ -1.69
PDLIM1-204ENST00000492511 MRPL35Q9NZE8 188 aaKnown RBP4.51□□□□□ -1.69
PDLIM1-204ENST00000492511 LOC107984640A0A0U1RRK4 108 aa4.5□□□□□ -1.69
PDLIM1-204ENST00000492511 F8WDY8 70 aa4.5□□□□□ -1.69
PDLIM1-204ENST00000492511 GAGE2BQ13066 116 aa4.5□□□□□ -1.69
PDLIM1-204ENST00000492511 C2orf82Q6UX34 121 aa4.5□□□□□ -1.69
PDLIM1-204ENST00000492511 C6orf48Q9UBA6 75 aa4.5□□□□□ -1.69
PDLIM1-204ENST00000492511 CDKN2A-AS1Q9UH64 79 aa4.5□□□□□ -1.69
PDLIM1-204ENST00000492511 TINCRA0A1B0GVN0 87 aa4.49□□□□□ -1.69
PDLIM1-204ENST00000492511 LINC01549A6NIU2 74 aa4.49□□□□□ -1.69
PDLIM1-204ENST00000492511 NDUFA1O15239 70 aa4.49□□□□□ -1.69
PDLIM1-204ENST00000492511 TLX1NBP0CAT3 122 aa4.49□□□□□ -1.69
PDLIM1-204ENST00000492511 HERVK_113P63121 156 aa4.49□□□□□ -1.69
PDLIM1-204ENST00000492511 PMCHL1Q16048 86 aa4.49□□□□□ -1.69
PDLIM1-204ENST00000492511 PDZD11Q5EBL8 140 aa4.49□□□□□ -1.69
PDLIM1-204ENST00000492511 PAPPA-AS1Q5QFB9 102 aa4.49□□□□□ -1.69
PDLIM1-204ENST00000492511 Q6ZRP5 223 aa4.49□□□□□ -1.69
PDLIM1-204ENST00000492511 SMCO4Q9NRQ5 59 aa4.49□□□□□ -1.69
PDLIM1-204ENST00000492511 LINC00474Q9P2X8 69 aa4.49□□□□□ -1.69
PDLIM1-204ENST00000492511 HMCN2Q8NDA2 5059 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms