RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 PANO1I0J062 215 aa10.53□□□□□ -0.72
PDLIM2-217ENST00000491330 IFI27P40305 119 aaPredicted RBP10.53□□□□□ -0.72
PDLIM2-217ENST00000491330 KRTAP10-4P60372 401 aaPredicted RBP10.53□□□□□ -0.72
PDLIM2-217ENST00000491330 CAMK2N2Q96S95 79 aa10.53□□□□□ -0.72
PDLIM2-217ENST00000491330 NXT2Q9NPJ8 142 aaKnown RBP10.53□□□□□ -0.72
PDLIM2-217ENST00000491330 ORMDL2Q53FV1 153 aa10.52□□□□□ -0.73
PDLIM2-217ENST00000491330 Q8N8P6 123 aa10.52□□□□□ -0.73
PDLIM2-217ENST00000491330 IGLV4-69A0A075B6H9 119 aa10.51□□□□□ -0.73
PDLIM2-217ENST00000491330 LOC107984640A0A0U1RRK4 108 aa10.51□□□□□ -0.73
PDLIM2-217ENST00000491330 LINC01549A6NIU2 74 aa10.51□□□□□ -0.73
PDLIM2-217ENST00000491330 MT-ND6P03923 174 aa10.51□□□□□ -0.73
PDLIM2-217ENST00000491330 GNB1LQ9BYB4 327 aa10.51□□□□□ -0.73
PDLIM2-217ENST00000491330 C2orf48Q96LS8 159 aa10.5□□□□□ -0.73
PDLIM2-217ENST00000491330 F8WDY8 70 aa10.49□□□□□ -0.73
PDLIM2-217ENST00000491330 NDUFA5Q16718 116 aa10.49□□□□□ -0.73
PDLIM2-217ENST00000491330 RNASE13Q5GAN3 156 aaKnown RBP10.49□□□□□ -0.73
PDLIM2-217ENST00000491330 Q6ZUT4 128 aa10.49□□□□□ -0.73
PDLIM2-217ENST00000491330 C5orf38Q86SI9 138 aa10.49□□□□□ -0.73
PDLIM2-217ENST00000491330 CYSLTR1Q9Y271 337 aa10.49□□□□□ -0.73
PDLIM2-217ENST00000491330 A0A096LNI7 61 aa10.48□□□□□ -0.73
PDLIM2-217ENST00000491330 TGIF2-C20orf24A0A0A6YYL0 155 aa10.48□□□□□ -0.73
PDLIM2-217ENST00000491330 IFITM10A6NMD0 228 aa10.48□□□□□ -0.73
PDLIM2-217ENST00000491330 RPL39P62891 51 aaKnown RBP10.48□□□□□ -0.73
PDLIM2-217ENST00000491330 PAPPA-AS1Q5QFB9 102 aa10.48□□□□□ -0.73
PDLIM2-217ENST00000491330 OR10D4PQ8NGN7 298 aa10.48□□□□□ -0.73
PDLIM2-217ENST00000491330 SPAG11BQ08648 103 aa10.47□□□□□ -0.73
PDLIM2-217ENST00000491330 GAGE2BQ13066 116 aa10.47□□□□□ -0.73
PDLIM2-217ENST00000491330 LINC00526Q96FQ7 95 aa10.47□□□□□ -0.73
PDLIM2-217ENST00000491330 Q6ZN92 141 aa10.46□□□□□ -0.73
PDLIM2-217ENST00000491330 TMEM141Q96I45 108 aa10.46□□□□□ -0.73
PDLIM2-217ENST00000491330 C2orf88Q9BSF0 95 aa10.46□□□□□ -0.73
PDLIM2-217ENST00000491330 LOC389332A0A1B0GUA5 103 aa10.45□□□□□ -0.74
PDLIM2-217ENST00000491330 SVBPQ8N300 66 aa10.45□□□□□ -0.74
PDLIM2-217ENST00000491330 VPS13BQ7Z7G8 4022 aa10.44□□□□□ -0.74
PDLIM2-217ENST00000491330 SNAPINO95295 136 aa10.44□□□□□ -0.74
PDLIM2-217ENST00000491330 PTTG1IPP53801 180 aa10.44□□□□□ -0.74
PDLIM2-217ENST00000491330 RPL18AQ02543 176 aaKnown RBP10.44□□□□□ -0.74
PDLIM2-217ENST00000491330 RNF151Q2KHN1 245 aa10.44□□□□□ -0.74
PDLIM2-217ENST00000491330 C2orf66Q6UXQ4 117 aa10.44□□□□□ -0.74
PDLIM2-217ENST00000491330 TEX43Q6ZNM6 134 aa10.44□□□□□ -0.74
PDLIM2-217ENST00000491330 Q6ZRP5 223 aa10.44□□□□□ -0.74
PDLIM2-217ENST00000491330 RPS10P5Q9NQ39 176 aa10.44□□□□□ -0.74
PDLIM2-217ENST00000491330 IGHV3OR16-9A0A0B4J2B5 98 aa10.43□□□□□ -0.74
PDLIM2-217ENST00000491330 NDUFA1O15239 70 aa10.43□□□□□ -0.74
PDLIM2-217ENST00000491330 SEC11AP67812 179 aa10.43□□□□□ -0.74
PDLIM2-217ENST00000491330 LINC01561Q8N1V8 128 aa10.43□□□□□ -0.74
PDLIM2-217ENST00000491330 ORAOV1Q8WV07 137 aa10.43□□□□□ -0.74
PDLIM2-217ENST00000491330 IGLV4-3A0A075B6K6 122 aa10.42□□□□□ -0.74
PDLIM2-217ENST00000491330 REG3GQ6UW15 175 aa10.42□□□□□ -0.74
PDLIM2-217ENST00000491330 FAM104AQ969W3 186 aa10.42□□□□□ -0.74
PDLIM2-217ENST00000491330 TIMM17AQ99595 171 aa10.42□□□□□ -0.74
PDLIM2-217ENST00000491330 PLA2G2DQ9UNK4 145 aa10.42□□□□□ -0.74
PDLIM2-217ENST00000491330 HNRNPA3P51991 378 aaKnown RBP10.41□□□□□ -0.74
PDLIM2-217ENST00000491330 PRR3P79522 188 aaKnown RBP10.41□□□□□ -0.74
PDLIM2-217ENST00000491330 LINC01546A6NGU7 62 aa10.4□□□□□ -0.74
PDLIM2-217ENST00000491330 SPINK6Q6UWN8 80 aa10.4□□□□□ -0.74
PDLIM2-217ENST00000491330 AMELXQ99217 191 aa10.4□□□□□ -0.74
PDLIM2-217ENST00000491330 VCX2Q9H322 139 aa10.4□□□□□ -0.74
PDLIM2-217ENST00000491330 MRPL35Q9NZE8 188 aaKnown RBP10.4□□□□□ -0.74
PDLIM2-217ENST00000491330 A0A087WZ39 114 aa10.39□□□□□ -0.75
PDLIM2-217ENST00000491330 IGIPA6NJ69 53 aa10.39□□□□□ -0.75
PDLIM2-217ENST00000491330 APOC3P02656 99 aa10.39□□□□□ -0.75
PDLIM2-217ENST00000491330 FAM19A3Q7Z5A8 133 aa10.39□□□□□ -0.75
PDLIM2-217ENST00000491330 TOMM6Q96B49 74 aa10.39□□□□□ -0.75
PDLIM2-217ENST00000491330 OPRPNQ99935 248 aaPredicted RBP10.39□□□□□ -0.75
PDLIM2-217ENST00000491330 ALKBH7Q9BT30 221 aaPredicted RBP10.39□□□□□ -0.75
PDLIM2-217ENST00000491330 MYCBP2O75592 4640 aa10.38□□□□□ -0.75
PDLIM2-217ENST00000491330 PRSS2P07478 247 aa10.38□□□□□ -0.75
PDLIM2-217ENST00000491330 PACRGQ96M98 296 aaPredicted RBP10.38□□□□□ -0.75
PDLIM2-217ENST00000491330 MRPL18Q9H0U6 180 aaKnown RBP10.38□□□□□ -0.75
PDLIM2-217ENST00000491330 UBE2D1P51668 147 aa10.37□□□□□ -0.75
PDLIM2-217ENST00000491330 FABP9Q0Z7S8 132 aa10.37□□□□□ -0.75
PDLIM2-217ENST00000491330 KIAA1644Q3SXP7 199 aa10.37□□□□□ -0.75
PDLIM2-217ENST00000491330 LINC00242Q5T6M2 205 aa10.37□□□□□ -0.75
PDLIM2-217ENST00000491330 ERASQ7Z444 233 aa10.37□□□□□ -0.75
PDLIM2-217ENST00000491330 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.36□□□□□ -0.75
PDLIM2-217ENST00000491330 HERVK_113P63121 156 aa10.36□□□□□ -0.75
PDLIM2-217ENST00000491330 HERC1Q15751 4861 aa10.35□□□□□ -0.75
PDLIM2-217ENST00000491330 C9orf116Q5BN46 136 aaPredicted RBP10.35□□□□□ -0.75
PDLIM2-217ENST00000491330 SMCO4Q9NRQ5 59 aa10.35□□□□□ -0.75
PDLIM2-217ENST00000491330 CKS1BP61024 79 aa10.34□□□□□ -0.75
PDLIM2-217ENST00000491330 FA2HQ7L5A8 372 aa10.34□□□□□ -0.75
PDLIM2-217ENST00000491330 TRAPPC1Q9Y5R8 145 aa10.34□□□□□ -0.75
PDLIM2-217ENST00000491330 TRBV30A0A0K0K1B3 111 aa10.33□□□□□ -0.76
PDLIM2-217ENST00000491330 LINC00173Q6ZV60 143 aa10.33□□□□□ -0.76
PDLIM2-217ENST00000491330 SCGB3A1Q96QR1 104 aa10.33□□□□□ -0.76
PDLIM2-217ENST00000491330 A0A0J9YXV3 536 aa10.32□□□□□ -0.76
PDLIM2-217ENST00000491330 TLX1NBP0CAT3 122 aa10.32□□□□□ -0.76
PDLIM2-217ENST00000491330 RAB5BP61020 215 aa10.32□□□□□ -0.76
PDLIM2-217ENST00000491330 C6orf226Q5I0X4 101 aa10.32□□□□□ -0.76
PDLIM2-217ENST00000491330 GEMIN7Q9H840 131 aaKnown RBP10.32□□□□□ -0.76
PDLIM2-217ENST00000491330 GAGE2EQ4V326 116 aa10.31□□□□□ -0.76
PDLIM2-217ENST00000491330 UNQ6190/PRO20217Q6UXQ8 127 aa10.31□□□□□ -0.76
PDLIM2-217ENST00000491330 LINC01600Q96MT4 127 aa10.31□□□□□ -0.76
PDLIM2-217ENST00000491330 GAGE2DQ9UEU5 116 aa10.31□□□□□ -0.76
PDLIM2-217ENST00000491330 A0A1W2PNN7 141 aa10.3□□□□□ -0.76
PDLIM2-217ENST00000491330 TOMM7Q9P0U1 55 aa10.29□□□□□ -0.76
PDLIM2-217ENST00000491330 LINC00614P0C842 121 aa10.28□□□□□ -0.76
PDLIM2-217ENST00000491330 UBE2BP63146 152 aa10.28□□□□□ -0.76
PDLIM2-217ENST00000491330 KIAA0087Q14695 138 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms