RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 TRGV1A0A0A0MS02 117 aa6.01□□□□□ -1.45
HPS4-215ENST00000491142 C16orf90A8MZG2 172 aa6.01□□□□□ -1.45
HPS4-215ENST00000491142 K7EQD1 137 aa6.01□□□□□ -1.45
HPS4-215ENST00000491142 CDK2AP2O75956 126 aa6.01□□□□□ -1.45
HPS4-215ENST00000491142 GCSHP23434 173 aa6.01□□□□□ -1.45
HPS4-215ENST00000491142 PTTG1IPP53801 180 aa6.01□□□□□ -1.45
HPS4-215ENST00000491142 COTL1Q14019 142 aa6.01□□□□□ -1.45
HPS4-215ENST00000491142 DEFB104AQ8WTQ1 72 aa6.01□□□□□ -1.45
HPS4-215ENST00000491142 VCX2Q9H322 139 aa6.01□□□□□ -1.45
HPS4-215ENST00000491142 UBE2D4Q9Y2X8 147 aa6.01□□□□□ -1.45
HPS4-215ENST00000491142 TMEM223A0PJW6 202 aa6□□□□□ -1.45
HPS4-215ENST00000491142 ZNF815PA8K554 130 aa6□□□□□ -1.45
HPS4-215ENST00000491142 LEPROTO15243 131 aa6□□□□□ -1.45
HPS4-215ENST00000491142 CCL25O15444 150 aa6□□□□□ -1.45
HPS4-215ENST00000491142 SMIM13P0DJ93 91 aa6□□□□□ -1.45
HPS4-215ENST00000491142 ZNF22P17026 224 aaPredicted RBP6□□□□□ -1.45
HPS4-215ENST00000491142 FXYD2P54710 66 aa6□□□□□ -1.45
HPS4-215ENST00000491142 MRPS36P82909 103 aaKnown RBP6□□□□□ -1.45
HPS4-215ENST00000491142 VAMP3Q15836 100 aa6□□□□□ -1.45
HPS4-215ENST00000491142 Q6ZTI0 123 aa6□□□□□ -1.45
HPS4-215ENST00000491142 Q8N1X5 172 aa6□□□□□ -1.45
HPS4-215ENST00000491142 ZNF479Q96JC4 524 aa6□□□□□ -1.45
HPS4-215ENST00000491142 OPRPNQ99935 248 aaPredicted RBP6□□□□□ -1.45
HPS4-215ENST00000491142 Q9UF83 564 aa6□□□□□ -1.45
HPS4-215ENST00000491142 A0A1B0GWB2 263 aa5.99□□□□□ -1.45
HPS4-215ENST00000491142 RPL36AP83881 106 aaKnown RBP5.99□□□□□ -1.45
HPS4-215ENST00000491142 RRN3P1Q2M238 152 aa5.99□□□□□ -1.45
HPS4-215ENST00000491142 TMEM170BQ5T4T1 132 aa5.99□□□□□ -1.45
HPS4-215ENST00000491142 C1orf134Q5TEV5 83 aa5.99□□□□□ -1.45
HPS4-215ENST00000491142 AMMECR1LQ6DCA0 310 aa5.99□□□□□ -1.45
HPS4-215ENST00000491142 DAZ4Q86SG3 579 aaKnown RBP5.99□□□□□ -1.45
HPS4-215ENST00000491142 UBE2DNLQ8IWF7 75 aa5.99□□□□□ -1.45
HPS4-215ENST00000491142 OR5A1Q8NGJ0 315 aa5.99□□□□□ -1.45
HPS4-215ENST00000491142 RPL36ALQ969Q0 106 aaKnown RBP5.99□□□□□ -1.45
HPS4-215ENST00000491142 HIST1H4GQ99525 98 aa5.99□□□□□ -1.45
HPS4-215ENST00000491142 NOP10Q9NPE3 64 aaKnown RBP5.99□□□□□ -1.45
HPS4-215ENST00000491142 DAZ3Q9NR90 486 aaKnown RBP5.99□□□□□ -1.45
HPS4-215ENST00000491142 SPANXB1Q9NS25 103 aaPredicted RBP5.99□□□□□ -1.45
HPS4-215ENST00000491142 A0A0J9YXV3 536 aa5.98□□□□□ -1.45
HPS4-215ENST00000491142 TINCRA0A1B0GVN0 87 aa5.98□□□□□ -1.45
HPS4-215ENST00000491142 TRBV6-4A0A1B0GX49 114 aa5.98□□□□□ -1.45
HPS4-215ENST00000491142 J3QQQ9 107 aa5.98□□□□□ -1.45
HPS4-215ENST00000491142 EMP1P54849 157 aa5.98□□□□□ -1.45
HPS4-215ENST00000491142 TSPEAR-AS2P59090 65 aa5.98□□□□□ -1.45
HPS4-215ENST00000491142 UBE2D3P61077 147 aa5.98□□□□□ -1.45
HPS4-215ENST00000491142 UBE2D2P62837 147 aa5.98□□□□□ -1.45
HPS4-215ENST00000491142 SMAGPQ0VAQ4 97 aa5.98□□□□□ -1.45
HPS4-215ENST00000491142 FAM19A3Q7Z5A8 133 aa5.98□□□□□ -1.45
HPS4-215ENST00000491142 PLEKHB2Q96CS7 222 aa5.98□□□□□ -1.45
HPS4-215ENST00000491142 GTSF1LQ9H1H1 148 aa5.98□□□□□ -1.45
HPS4-215ENST00000491142 CSDC2Q9Y534 153 aaKnown RBP5.98□□□□□ -1.45
HPS4-215ENST00000491142 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.97□□□□□ -1.45
HPS4-215ENST00000491142 IGHV3-38A0A0C4DH36 116 aa5.97□□□□□ -1.45
HPS4-215ENST00000491142 A0A0J9YY99 117 aa5.97□□□□□ -1.45
HPS4-215ENST00000491142 IGKV2-29A2NJV5 120 aaPredicted RBP5.97□□□□□ -1.45
HPS4-215ENST00000491142 SMIM9A6NGZ8 99 aa5.97□□□□□ -1.45
HPS4-215ENST00000491142 LGALS3P17931 250 aaKnown RBP5.97□□□□□ -1.45
HPS4-215ENST00000491142 SCGB1D4Q6XE38 83 aa5.97□□□□□ -1.45
HPS4-215ENST00000491142 LINC00612Q8N6U2 182 aa5.97□□□□□ -1.45
HPS4-215ENST00000491142 SLC25A29Q8N8R3 303 aa5.97□□□□□ -1.45
HPS4-215ENST00000491142 IGLV5-45A0A087WSX0 123 aa5.96□□□□□ -1.46
HPS4-215ENST00000491142 A0A1W2PPM0 123 aa5.96□□□□□ -1.46
HPS4-215ENST00000491142 H3BUT2 72 aa5.96□□□□□ -1.46
HPS4-215ENST00000491142 H7C423 109 aa5.96□□□□□ -1.46
HPS4-215ENST00000491142 K7EP13 123 aa5.96□□□□□ -1.46
HPS4-215ENST00000491142 K7EP34 96 aa5.96□□□□□ -1.46
HPS4-215ENST00000491142 UBE2D1P51668 147 aa5.96□□□□□ -1.46
HPS4-215ENST00000491142 TIRAPP58753 221 aa5.96□□□□□ -1.46
HPS4-215ENST00000491142 Q6ZUT4 128 aa5.96□□□□□ -1.46
HPS4-215ENST00000491142 GTF2H5Q6ZYL4 71 aa5.96□□□□□ -1.46
HPS4-215ENST00000491142 NHP2Q9NX24 153 aaKnown RBP5.96□□□□□ -1.46
HPS4-215ENST00000491142 MYCBP2O75592 4640 aa5.95□□□□□ -1.46
HPS4-215ENST00000491142 TRGV2A0A075B6R0 118 aa5.95□□□□□ -1.46
HPS4-215ENST00000491142 GAGE12BA1L429 117 aa5.95□□□□□ -1.46
HPS4-215ENST00000491142 GAGE10A6NGK3 116 aa5.95□□□□□ -1.46
HPS4-215ENST00000491142 GAGE7O76087 117 aa5.95□□□□□ -1.46
HPS4-215ENST00000491142 GAGE12FP0CL80 117 aa5.95□□□□□ -1.46
HPS4-215ENST00000491142 GAGE12GP0CL81 117 aa5.95□□□□□ -1.46
HPS4-215ENST00000491142 GAGE12IP0CL82 117 aa5.95□□□□□ -1.46
HPS4-215ENST00000491142 LINC00694P0DN24 101 aa5.95□□□□□ -1.46
HPS4-215ENST00000491142 NTM-AS1Q6ZSK4 140 aa5.95□□□□□ -1.46
HPS4-215ENST00000491142 RAB37Q96AX2 223 aa5.95□□□□□ -1.46
HPS4-215ENST00000491142 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.95□□□□□ -1.46
HPS4-215ENST00000491142 VPS13BQ7Z7G8 4022 aa5.95□□□□□ -1.46
HPS4-215ENST00000491142 IGHV1-58A0A0C4DH39 117 aa5.94□□□□□ -1.46
HPS4-215ENST00000491142 FABP2P12104 132 aa5.94□□□□□ -1.46
HPS4-215ENST00000491142 FHL2Q14192 279 aa5.94□□□□□ -1.46
HPS4-215ENST00000491142 TRGV4A0A0C4DH28 118 aa5.93□□□□□ -1.46
HPS4-215ENST00000491142 KRTAP4-8A0A0G2JLE6 195 aa5.93□□□□□ -1.46
HPS4-215ENST00000491142 GAGE12JA6NER3 117 aa5.93□□□□□ -1.46
HPS4-215ENST00000491142 ZNF561-AS1K7EIQ3 104 aa5.93□□□□□ -1.46
HPS4-215ENST00000491142 K7ERJ3 54 aa5.93□□□□□ -1.46
HPS4-215ENST00000491142 IGHV3-30P01768 117 aa5.93□□□□□ -1.46
HPS4-215ENST00000491142 SPART-AS1P0CW21 52 aa5.93□□□□□ -1.46
HPS4-215ENST00000491142 IGHV3-30-3P0DP02 117 aa5.93□□□□□ -1.46
HPS4-215ENST00000491142 IGHV3-30-5P0DP03 117 aa5.93□□□□□ -1.46
HPS4-215ENST00000491142 HTN3P15516 51 aa5.93□□□□□ -1.46
HPS4-215ENST00000491142 GAGE4Q13068 117 aa5.93□□□□□ -1.46
HPS4-215ENST00000491142 GAGE5Q13069 117 aa5.93□□□□□ -1.46
HPS4-215ENST00000491142 SRSF9Q13242 221 aaKnown RBP eCLIP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms