RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 TMEM223A0PJW6 202 aa9.55□□□□□ -0.88
SMPD4-219ENST00000491128 E9PLD3 99 aa9.55□□□□□ -0.88
SMPD4-219ENST00000491128 IGHV3-30P01768 117 aa9.55□□□□□ -0.88
SMPD4-219ENST00000491128 IGHV3-33P01772 117 aa9.55□□□□□ -0.88
SMPD4-219ENST00000491128 IGHV3-30-3P0DP02 117 aa9.55□□□□□ -0.88
SMPD4-219ENST00000491128 IGHV3-30-5P0DP03 117 aa9.55□□□□□ -0.88
SMPD4-219ENST00000491128 ESRGQ1W209 222 aa9.55□□□□□ -0.88
SMPD4-219ENST00000491128 WFDC10BQ8IUB3 73 aa9.55□□□□□ -0.88
SMPD4-219ENST00000491128 LINC00269Q8N2A0 174 aa9.55□□□□□ -0.88
SMPD4-219ENST00000491128 ANGP03950 147 aaKnown RBP9.55□□□□□ -0.88
SMPD4-219ENST00000491128 B9D2Q9BPU9 175 aa9.55□□□□□ -0.88
SMPD4-219ENST00000491128 TINCRA0A1B0GVN0 87 aa9.54□□□□□ -0.88
SMPD4-219ENST00000491128 IGLL5B9A064 214 aa9.54□□□□□ -0.88
SMPD4-219ENST00000491128 PLEKHB2Q96CS7 222 aa9.54□□□□□ -0.88
SMPD4-219ENST00000491128 TMEM97Q5BJF2 176 aa9.53□□□□□ -0.88
SMPD4-219ENST00000491128 FBN3Q75N90 2809 aa9.53□□□□□ -0.88
SMPD4-219ENST00000491128 ZNF815PA8K554 130 aa9.53□□□□□ -0.88
SMPD4-219ENST00000491128 H7C423 109 aa9.53□□□□□ -0.88
SMPD4-219ENST00000491128 XCL1P47992 114 aa9.53□□□□□ -0.88
SMPD4-219ENST00000491128 TGP01266 2768 aa9.52□□□□□ -0.88
SMPD4-219ENST00000491128 HERVK_113P61574 105 aa9.52□□□□□ -0.89
SMPD4-219ENST00000491128 LELP1Q5T871 98 aa9.52□□□□□ -0.89
SMPD4-219ENST00000491128 GAGE10A6NGK3 116 aa9.52□□□□□ -0.89
SMPD4-219ENST00000491128 C5orf38Q86SI9 138 aa9.52□□□□□ -0.89
SMPD4-219ENST00000491128 KLK12Q9UKR0 248 aa9.52□□□□□ -0.89
SMPD4-219ENST00000491128 TRAV10A0A0B4J240 114 aa9.51□□□□□ -0.89
SMPD4-219ENST00000491128 J3QQQ9 107 aa9.51□□□□□ -0.89
SMPD4-219ENST00000491128 DNAH7Q8WXX0 4024 aa9.51□□□□□ -0.89
SMPD4-219ENST00000491128 MYMXA0A1B0GTQ4 84 aa9.51□□□□□ -0.89
SMPD4-219ENST00000491128 LINC00959A0A1B0GUT2 108 aa9.51□□□□□ -0.89
SMPD4-219ENST00000491128 SEC11AP67812 179 aa9.5□□□□□ -0.89
SMPD4-219ENST00000491128 A0A1B0GUV1 79 aa9.49□□□□□ -0.89
SMPD4-219ENST00000491128 LGALS3P17931 250 aaKnown RBP9.49□□□□□ -0.89
SMPD4-219ENST00000491128 SCGB1D4Q6XE38 83 aa9.49□□□□□ -0.89
SMPD4-219ENST00000491128 C9orf118A6NHY6 69 aa9.49□□□□□ -0.89
SMPD4-219ENST00000491128 HERVK_113P63121 156 aa9.49□□□□□ -0.89
SMPD4-219ENST00000491128 REG3AQ06141 175 aa9.49□□□□□ -0.89
SMPD4-219ENST00000491128 SMAGPQ0VAQ4 97 aa9.49□□□□□ -0.89
SMPD4-219ENST00000491128 ZNF625Q96I27 306 aaPredicted RBP9.49□□□□□ -0.89
SMPD4-219ENST00000491128 H3BRM9 83 aa9.48□□□□□ -0.89
SMPD4-219ENST00000491128 TIRAPP58753 221 aa9.48□□□□□ -0.89
SMPD4-219ENST00000491128 NAA38Q9BRA0 125 aaKnown RBP9.48□□□□□ -0.89
SMPD4-219ENST00000491128 IGHV1-58A0A0C4DH39 117 aa9.48□□□□□ -0.89
SMPD4-219ENST00000491128 H3BNG1 76 aa9.48□□□□□ -0.89
SMPD4-219ENST00000491128 K7EP34 96 aa9.48□□□□□ -0.89
SMPD4-219ENST00000491128 SH2D6Q7Z4S9 175 aa9.48□□□□□ -0.89
SMPD4-219ENST00000491128 SMIM1B2RUZ4 78 aa9.47□□□□□ -0.89
SMPD4-219ENST00000491128 LEPROTO15243 131 aa9.47□□□□□ -0.89
SMPD4-219ENST00000491128 GTF2H5Q6ZYL4 71 aa9.47□□□□□ -0.89
SMPD4-219ENST00000491128 TOMM7Q9P0U1 55 aa9.47□□□□□ -0.89
SMPD4-219ENST00000491128 H3BUT2 72 aa9.47□□□□□ -0.89
SMPD4-219ENST00000491128 PLECQ15149 4684 aaKnown RBP9.46□□□□□ -0.89
SMPD4-219ENST00000491128 IGLV5-45A0A087WSX0 123 aa9.46□□□□□ -0.89
SMPD4-219ENST00000491128 A0A0U1RRA0 63 aa9.46□□□□□ -0.89
SMPD4-219ENST00000491128 TMEM238LA0A1B0GVL6 79 aa9.46□□□□□ -0.89
SMPD4-219ENST00000491128 UBE2WQ96B02 151 aa9.46□□□□□ -0.89
SMPD4-219ENST00000491128 C10orf126Q8N4M7 172 aa9.46□□□□□ -0.9
SMPD4-219ENST00000491128 STARD9Q9P2P6 4700 aa9.46□□□□□ -0.9
SMPD4-219ENST00000491128 GCSHP23434 173 aa9.45□□□□□ -0.9
SMPD4-219ENST00000491128 IGHV3OR16-9A0A0B4J2B5 98 aa9.45□□□□□ -0.9
SMPD4-219ENST00000491128 ENHOQ6UWT2 76 aa9.45□□□□□ -0.9
SMPD4-219ENST00000491128 LINC00588Q9Y4M8 146 aa9.45□□□□□ -0.9
SMPD4-219ENST00000491128 CHCHD10Q8WYQ3 142 aaPredicted RBP9.44□□□□□ -0.9
SMPD4-219ENST00000491128 NDUFA12Q9UI09 145 aa9.44□□□□□ -0.9
SMPD4-219ENST00000491128 A6NDN8 102 aa9.44□□□□□ -0.9
SMPD4-219ENST00000491128 SS18Q15532 418 aa9.44□□□□□ -0.9
SMPD4-219ENST00000491128 FAM19A3Q7Z5A8 133 aa9.44□□□□□ -0.9
SMPD4-219ENST00000491128 HIST1H4GQ99525 98 aa9.44□□□□□ -0.9
SMPD4-219ENST00000491128 FXYD2P54710 66 aa9.43□□□□□ -0.9
SMPD4-219ENST00000491128 NPC2P61916 151 aa9.43□□□□□ -0.9
SMPD4-219ENST00000491128 DAND5Q8N907 189 aa9.43□□□□□ -0.9
SMPD4-219ENST00000491128 RAB37Q96AX2 223 aa9.43□□□□□ -0.9
SMPD4-219ENST00000491128 SIVA1O15304 175 aa9.42□□□□□ -0.9
SMPD4-219ENST00000491128 HSD52Q0P140 79 aa9.42□□□□□ -0.9
SMPD4-219ENST00000491128 KRTAP21-3Q3LHN1 58 aa9.42□□□□□ -0.9
SMPD4-219ENST00000491128 LINC00526Q96FQ7 95 aa9.42□□□□□ -0.9
SMPD4-219ENST00000491128 Q9H8V8 135 aa9.42□□□□□ -0.9
SMPD4-219ENST00000491128 A0A1W2PPM0 123 aa9.41□□□□□ -0.9
SMPD4-219ENST00000491128 SRSF9Q13242 221 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMPD4-219ENST00000491128 IGLV5-39A0A0G2JS06 123 aa9.41□□□□□ -0.9
SMPD4-219ENST00000491128 A0A0J9YXY3 114 aa9.41□□□□□ -0.9
SMPD4-219ENST00000491128 Q9HAA7 133 aa9.41□□□□□ -0.9
SMPD4-219ENST00000491128 SPCS1Q9Y6A9 102 aa9.41□□□□□ -0.9
SMPD4-219ENST00000491128 GAGE12HA6NDE8 117 aa9.4□□□□□ -0.9
SMPD4-219ENST00000491128 K7ERJ3 54 aa9.4□□□□□ -0.9
SMPD4-219ENST00000491128 ADAMTSL4-AS1Q5T5F5 129 aa9.4□□□□□ -0.9
SMPD4-219ENST00000491128 C15orf53Q8NAA6 179 aa9.4□□□□□ -0.9
SMPD4-219ENST00000491128 HIGD1BQ9P298 99 aa9.4□□□□□ -0.9
SMPD4-219ENST00000491128 A0A087WZ39 114 aa9.39□□□□□ -0.91
SMPD4-219ENST00000491128 CRPP02741 224 aa9.39□□□□□ -0.91
SMPD4-219ENST00000491128 SCGB1A1P11684 91 aa9.39□□□□□ -0.91
SMPD4-219ENST00000491128 ZFAND6Q6FIF0 208 aa9.39□□□□□ -0.91
SMPD4-219ENST00000491128 C2orf82Q6UX34 121 aa9.39□□□□□ -0.91
SMPD4-219ENST00000491128 NHLRC4P0CG21 123 aaPredicted RBP9.38□□□□□ -0.91
SMPD4-219ENST00000491128 CCL18P55774 89 aa9.38□□□□□ -0.91
SMPD4-219ENST00000491128 PRR34Q9NV39 138 aa9.38□□□□□ -0.91
SMPD4-219ENST00000491128 EIF4EBP3O60516 100 aaPredicted RBP9.38□□□□□ -0.91
SMPD4-219ENST00000491128 FOXI1Q12951 378 aa9.38□□□□□ -0.91
SMPD4-219ENST00000491128 CEND1Q8N111 149 aa9.38□□□□□ -0.91
SMPD4-219ENST00000491128 COX7B2Q8TF08 81 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms