RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 OPRPNQ99935 248 aaPredicted RBP9.59□□□□□ -0.87
NUP58-213ENST00000490231 IGHV3OR16-9A0A0B4J2B5 98 aa9.58□□□□□ -0.88
NUP58-213ENST00000490231 SMIM27A0A1W2PRY6 76 aa9.58□□□□□ -0.88
NUP58-213ENST00000490231 C9JQL5 133 aa9.58□□□□□ -0.88
NUP58-213ENST00000490231 C1orf137Q5JT78 98 aa9.58□□□□□ -0.88
NUP58-213ENST00000490231 PHF5AQ7RTV0 110 aaKnown RBP9.58□□□□□ -0.88
NUP58-213ENST00000490231 FAM104AQ969W3 186 aa9.58□□□□□ -0.88
NUP58-213ENST00000490231 SPANXA1Q9NS26 97 aa9.58□□□□□ -0.88
NUP58-213ENST00000490231 TNFRSF6BO95407 300 aa9.57□□□□□ -0.88
NUP58-213ENST00000490231 CKS2P33552 79 aa9.57□□□□□ -0.88
NUP58-213ENST00000490231 RPL39P62891 51 aaKnown RBP9.57□□□□□ -0.88
NUP58-213ENST00000490231 SRSF3P84103 164 aaKnown RBP9.57□□□□□ -0.88
NUP58-213ENST00000490231 ORAOV1Q8WV07 137 aa9.57□□□□□ -0.88
NUP58-213ENST00000490231 IMMP2LQ96T52 175 aa9.57□□□□□ -0.88
NUP58-213ENST00000490231 NDUFA1O15239 70 aa9.56□□□□□ -0.88
NUP58-213ENST00000490231 MRPS36P82909 103 aaKnown RBP9.56□□□□□ -0.88
NUP58-213ENST00000490231 ADIRFQ15847 76 aa9.56□□□□□ -0.88
NUP58-213ENST00000490231 SMIM2Q9BVW6 85 aa9.56□□□□□ -0.88
NUP58-213ENST00000490231 NAT8Q9UHE5 227 aa9.56□□□□□ -0.88
NUP58-213ENST00000490231 TLX1NBP0CAT3 122 aa9.55□□□□□ -0.88
NUP58-213ENST00000490231 IGLV7-43P04211 117 aa9.54□□□□□ -0.88
NUP58-213ENST00000490231 HBBP68871 147 aa9.54□□□□□ -0.88
NUP58-213ENST00000490231 DIRC1Q969H9 104 aa9.54□□□□□ -0.88
NUP58-213ENST00000490231 IFITM10A6NMD0 228 aa9.53□□□□□ -0.88
NUP58-213ENST00000490231 D6R8Y8 96 aa9.53□□□□□ -0.88
NUP58-213ENST00000490231 F8W036 122 aa9.53□□□□□ -0.88
NUP58-213ENST00000490231 S100A8P05109 93 aa9.53□□□□□ -0.88
NUP58-213ENST00000490231 C10orf25Q5T742 122 aa9.53□□□□□ -0.88
NUP58-213ENST00000490231 PPBPP02775 128 aa9.52□□□□□ -0.89
NUP58-213ENST00000490231 UNQ6190/PRO20217Q6UXQ8 127 aa9.52□□□□□ -0.89
NUP58-213ENST00000490231 C6orf48Q9UBA6 75 aa9.52□□□□□ -0.89
NUP58-213ENST00000490231 A0A087WZ39 114 aa9.51□□□□□ -0.89
NUP58-213ENST00000490231 A0A1B0GXF2 115 aa9.51□□□□□ -0.89
NUP58-213ENST00000490231 FAM168BA1KXE4 195 aa9.51□□□□□ -0.89
NUP58-213ENST00000490231 NPYP01303 97 aa9.51□□□□□ -0.89
NUP58-213ENST00000490231 MRPL54Q6P161 138 aaKnown RBP9.51□□□□□ -0.89
NUP58-213ENST00000490231 TGIF2-C20orf24A0A0A6YYL0 155 aa9.5□□□□□ -0.89
NUP58-213ENST00000490231 H0Y9J4 135 aa9.5□□□□□ -0.89
NUP58-213ENST00000490231 KIAA0087Q14695 138 aa9.5□□□□□ -0.89
NUP58-213ENST00000490231 CLLU1Q5K131 121 aa9.5□□□□□ -0.89
NUP58-213ENST00000490231 KRTAP11-1Q8IUC1 163 aa9.5□□□□□ -0.89
NUP58-213ENST00000490231 PRR26Q8N8Z3 221 aa9.5□□□□□ -0.89
NUP58-213ENST00000490231 SMDT1Q9H4I9 107 aa9.5□□□□□ -0.89
NUP58-213ENST00000490231 PYGO1Q9Y3Y4 419 aa9.5□□□□□ -0.89
NUP58-213ENST00000490231 IFI27P40305 119 aaPredicted RBP9.49□□□□□ -0.89
NUP58-213ENST00000490231 PEA15Q15121 130 aa9.49□□□□□ -0.89
NUP58-213ENST00000490231 FAM19A5Q7Z5A7 132 aaPredicted RBP9.49□□□□□ -0.89
NUP58-213ENST00000490231 RAB5AP20339 215 aa9.48□□□□□ -0.89
NUP58-213ENST00000490231 GAGE2EQ4V326 116 aa9.48□□□□□ -0.89
NUP58-213ENST00000490231 ORMDL3Q8N138 153 aa9.48□□□□□ -0.89
NUP58-213ENST00000490231 GAGE2DQ9UEU5 116 aa9.48□□□□□ -0.89
NUP58-213ENST00000490231 TRBV30A0A0K0K1B3 111 aa9.47□□□□□ -0.89
NUP58-213ENST00000490231 LINC00242Q5T6M2 205 aa9.47□□□□□ -0.89
NUP58-213ENST00000490231 KRTAP7-1Q8IUC3 87 aa9.47□□□□□ -0.89
NUP58-213ENST00000490231 IGLV1-50A0A075B6I6 118 aa9.46□□□□□ -0.9
NUP58-213ENST00000490231 IGLV4-3A0A075B6K6 122 aa9.46□□□□□ -0.9
NUP58-213ENST00000490231 M0QXV9 152 aa9.46□□□□□ -0.9
NUP58-213ENST00000490231 TMEM136Q6ZRR5 245 aa9.46□□□□□ -0.9
NUP58-213ENST00000490231 ATP5L2Q7Z4Y8 100 aa9.46□□□□□ -0.9
NUP58-213ENST00000490231 LPAP08519 4548 aa9.46□□□□□ -0.9
NUP58-213ENST00000490231 PRSS47A8MTI9 375 aa9.45□□□□□ -0.9
NUP58-213ENST00000490231 NDUFC2-KCTD14E9PQ53 114 aa9.45□□□□□ -0.9
NUP58-213ENST00000490231 LINC01561Q8N1V8 128 aa9.45□□□□□ -0.9
NUP58-213ENST00000490231 TMEM141Q96I45 108 aa9.45□□□□□ -0.9
NUP58-213ENST00000490231 PRELID3AQ96N28 172 aa9.45□□□□□ -0.9
NUP58-213ENST00000490231 KRTAP1-4P0C5Y4 121 aa9.44□□□□□ -0.9
NUP58-213ENST00000490231 UBE2BP63146 152 aa9.44□□□□□ -0.9
NUP58-213ENST00000490231 PACRGQ96M98 296 aaPredicted RBP9.44□□□□□ -0.9
NUP58-213ENST00000490231 UBE2D1P51668 147 aa9.43□□□□□ -0.9
NUP58-213ENST00000490231 RAB14P61106 215 aa9.43□□□□□ -0.9
NUP58-213ENST00000490231 C9orf129Q5T035 196 aaKnown RBP9.43□□□□□ -0.9
NUP58-213ENST00000490231 C2orf82Q6UX34 121 aa9.43□□□□□ -0.9
NUP58-213ENST00000490231 TEX43Q6ZNM6 134 aa9.43□□□□□ -0.9
NUP58-213ENST00000490231 LAMTOR2Q9Y2Q5 125 aa9.43□□□□□ -0.9
NUP58-213ENST00000490231 C2orf88Q9BSF0 95 aa9.41□□□□□ -0.9
NUP58-213ENST00000490231 RPL13AP40429 203 aaKnown RBP9.4□□□□□ -0.9
NUP58-213ENST00000490231 Q6ZN92 141 aa9.4□□□□□ -0.9
NUP58-213ENST00000490231 MAP1LC3AQ9H492 121 aa9.4□□□□□ -0.9
NUP58-213ENST00000490231 CYSLTR1Q9Y271 337 aa9.4□□□□□ -0.9
NUP58-213ENST00000490231 LOC389332A0A1B0GUA5 103 aa9.39□□□□□ -0.91
NUP58-213ENST00000490231 NPSP0C0P6 89 aa9.39□□□□□ -0.91
NUP58-213ENST00000490231 C2orf66Q6UXQ4 117 aa9.39□□□□□ -0.91
NUP58-213ENST00000490231 LINC00173Q6ZV60 143 aa9.39□□□□□ -0.91
NUP58-213ENST00000490231 Q8N8P6 123 aa9.39□□□□□ -0.91
NUP58-213ENST00000490231 AMELXQ99217 191 aa9.39□□□□□ -0.91
NUP58-213ENST00000490231 PRSS2P07478 247 aa9.38□□□□□ -0.91
NUP58-213ENST00000490231 FAM19A3Q7Z5A8 133 aa9.38□□□□□ -0.91
NUP58-213ENST00000490231 VCX2Q9H322 139 aa9.38□□□□□ -0.91
NUP58-213ENST00000490231 CARHSP1Q9Y2V2 147 aaKnown RBP9.38□□□□□ -0.91
NUP58-213ENST00000490231 K7EMI3 77 aa9.37□□□□□ -0.91
NUP58-213ENST00000490231 ZNF861PO60384 105 aa9.37□□□□□ -0.91
NUP58-213ENST00000490231 ADCYAP1P18509 176 aa9.37□□□□□ -0.91
NUP58-213ENST00000490231 CKS1BP61024 79 aa9.37□□□□□ -0.91
NUP58-213ENST00000490231 ORMDL2Q53FV1 153 aa9.37□□□□□ -0.91
NUP58-213ENST00000490231 ZC2HC1BQ5TFG8 222 aa9.37□□□□□ -0.91
NUP58-213ENST00000490231 Q8IZM0 81 aa9.37□□□□□ -0.91
NUP58-213ENST00000490231 NUPR1O60356 82 aa9.36□□□□□ -0.91
NUP58-213ENST00000490231 C6orf226Q5I0X4 101 aa9.36□□□□□ -0.91
NUP58-213ENST00000490231 UQCC3Q6UW78 93 aa9.36□□□□□ -0.91
NUP58-213ENST00000490231 TOMM7Q9P0U1 55 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms