RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 RNF213Q63HN8 5207 aa11.97□□□□□ -0.49
TNFRSF1B-202ENST00000489921 IGHV3OR16-9A0A0B4J2B5 98 aa11.97□□□□□ -0.49
TNFRSF1B-202ENST00000489921 APOMO95445 188 aa11.97□□□□□ -0.49
TNFRSF1B-202ENST00000489921 HBBP68871 147 aa11.97□□□□□ -0.49
TNFRSF1B-202ENST00000489921 TCAPO15273 167 aa11.95□□□□□ -0.5
TNFRSF1B-202ENST00000489921 MRPS36P82909 103 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1B-202ENST00000489921 SPAG11BQ08648 103 aa11.95□□□□□ -0.5
TNFRSF1B-202ENST00000489921 RNF151Q2KHN1 245 aa11.95□□□□□ -0.5
TNFRSF1B-202ENST00000489921 C9orf116Q5BN46 136 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF1B-202ENST00000489921 OR10D4PQ8NGN7 298 aa11.94□□□□□ -0.5
TNFRSF1B-202ENST00000489921 SPANXA1Q9NS26 97 aa11.94□□□□□ -0.5
TNFRSF1B-202ENST00000489921 F8W036 122 aa11.93□□□□□ -0.5
TNFRSF1B-202ENST00000489921 PPBPP02775 128 aa11.92□□□□□ -0.5
TNFRSF1B-202ENST00000489921 S100A8P05109 93 aa11.92□□□□□ -0.5
TNFRSF1B-202ENST00000489921 C10orf25Q5T742 122 aa11.92□□□□□ -0.5
TNFRSF1B-202ENST00000489921 REG3GQ6UW15 175 aa11.92□□□□□ -0.5
TNFRSF1B-202ENST00000489921 PSORS1C2Q9UIG4 136 aa11.92□□□□□ -0.5
TNFRSF1B-202ENST00000489921 RPL18AQ02543 176 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1B-202ENST00000489921 PHF5AQ7RTV0 110 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1B-202ENST00000489921 ORAOV1Q8WV07 137 aa11.91□□□□□ -0.5
TNFRSF1B-202ENST00000489921 MRPL35Q9NZE8 188 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1B-202ENST00000489921 IFITM10A6NMD0 228 aa11.89□□□□□ -0.51
TNFRSF1B-202ENST00000489921 PRSS47A8MTI9 375 aa11.89□□□□□ -0.51
TNFRSF1B-202ENST00000489921 TMEM136Q6ZRR5 245 aa11.89□□□□□ -0.51
TNFRSF1B-202ENST00000489921 ATP5L2Q7Z4Y8 100 aa11.89□□□□□ -0.51
TNFRSF1B-202ENST00000489921 ORMDL3Q8N138 153 aa11.89□□□□□ -0.51
TNFRSF1B-202ENST00000489921 F8WDY8 70 aa11.88□□□□□ -0.51
TNFRSF1B-202ENST00000489921 KIAA0087Q14695 138 aa11.88□□□□□ -0.51
TNFRSF1B-202ENST00000489921 UNQ6190/PRO20217Q6UXQ8 127 aa11.88□□□□□ -0.51
TNFRSF1B-202ENST00000489921 KRTAP11-1Q8IUC1 163 aa11.88□□□□□ -0.51
TNFRSF1B-202ENST00000489921 PRELID3AQ96N28 172 aa11.88□□□□□ -0.51
TNFRSF1B-202ENST00000489921 PYGO1Q9Y3Y4 419 aa11.88□□□□□ -0.51
TNFRSF1B-202ENST00000489921 IGLV4-3A0A075B6K6 122 aa11.87□□□□□ -0.51
TNFRSF1B-202ENST00000489921 FAM168BA1KXE4 195 aa11.87□□□□□ -0.51
TNFRSF1B-202ENST00000489921 TLX1NBP0CAT3 122 aa11.87□□□□□ -0.51
TNFRSF1B-202ENST00000489921 LINC00242Q5T6M2 205 aa11.87□□□□□ -0.51
TNFRSF1B-202ENST00000489921 C6orf48Q9UBA6 75 aa11.87□□□□□ -0.51
TNFRSF1B-202ENST00000489921 A0A087WZ39 114 aa11.86□□□□□ -0.51
TNFRSF1B-202ENST00000489921 KRTAP7-1Q8IUC3 87 aa11.86□□□□□ -0.51
TNFRSF1B-202ENST00000489921 NDUFA1O15239 70 aa11.85□□□□□ -0.51
TNFRSF1B-202ENST00000489921 MT-ND6P03923 174 aa11.85□□□□□ -0.51
TNFRSF1B-202ENST00000489921 IMMP2LQ96T52 175 aa11.85□□□□□ -0.51
TNFRSF1B-202ENST00000489921 RAB5AP20339 215 aa11.84□□□□□ -0.51
TNFRSF1B-202ENST00000489921 IFI27P40305 119 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1B-202ENST00000489921 C1orf137Q5JT78 98 aa11.83□□□□□ -0.52
TNFRSF1B-202ENST00000489921 LOC389332A0A1B0GUA5 103 aa11.82□□□□□ -0.52
TNFRSF1B-202ENST00000489921 ZC2HC1BQ5TFG8 222 aa11.82□□□□□ -0.52
TNFRSF1B-202ENST00000489921 LINC00173Q6ZV60 143 aa11.82□□□□□ -0.52
TNFRSF1B-202ENST00000489921 TMEM141Q96I45 108 aa11.82□□□□□ -0.52
TNFRSF1B-202ENST00000489921 LPAP08519 4548 aa11.81□□□□□ -0.52
TNFRSF1B-202ENST00000489921 TGIF2-C20orf24A0A0A6YYL0 155 aa11.81□□□□□ -0.52
TNFRSF1B-202ENST00000489921 UBE2D1P51668 147 aa11.81□□□□□ -0.52
TNFRSF1B-202ENST00000489921 LAMTOR2Q9Y2Q5 125 aa11.81□□□□□ -0.52
TNFRSF1B-202ENST00000489921 C2orf82Q6UX34 121 aa11.8□□□□□ -0.52
TNFRSF1B-202ENST00000489921 IGLV7-43P04211 117 aa11.79□□□□□ -0.52
TNFRSF1B-202ENST00000489921 GAGE2EQ4V326 116 aa11.79□□□□□ -0.52
TNFRSF1B-202ENST00000489921 Q8N8P6 123 aa11.79□□□□□ -0.52
TNFRSF1B-202ENST00000489921 AMELXQ99217 191 aa11.79□□□□□ -0.52
TNFRSF1B-202ENST00000489921 GAGE2DQ9UEU5 116 aa11.79□□□□□ -0.52
TNFRSF1B-202ENST00000489921 PNRC1Q12796 327 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF1B-202ENST00000489921 C2orf66Q6UXQ4 117 aa11.78□□□□□ -0.52
TNFRSF1B-202ENST00000489921 FAM19A5Q7Z5A7 132 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF1B-202ENST00000489921 ANAPC16Q96DE5 110 aa11.78□□□□□ -0.52
TNFRSF1B-202ENST00000489921 MAP1LC3AQ9H492 121 aa11.78□□□□□ -0.52
TNFRSF1B-202ENST00000489921 TRBV30A0A0K0K1B3 111 aa11.77□□□□□ -0.53
TNFRSF1B-202ENST00000489921 TEX43Q6ZNM6 134 aa11.77□□□□□ -0.53
TNFRSF1B-202ENST00000489921 LINC01561Q8N1V8 128 aa11.77□□□□□ -0.53
TNFRSF1B-202ENST00000489921 IGIPA6NJ69 53 aa11.76□□□□□ -0.53
TNFRSF1B-202ENST00000489921 MT-ND4LP03901 98 aa11.76□□□□□ -0.53
TNFRSF1B-202ENST00000489921 C9orf129Q5T035 196 aaKnown RBP11.76□□□□□ -0.53
TNFRSF1B-202ENST00000489921 FAM19A3Q7Z5A8 133 aa11.75□□□□□ -0.53
TNFRSF1B-202ENST00000489921 CYSLTR1Q9Y271 337 aa11.75□□□□□ -0.53
TNFRSF1B-202ENST00000489921 NDUFC2-KCTD14E9PQ53 114 aa11.74□□□□□ -0.53
TNFRSF1B-202ENST00000489921 H0Y9J4 135 aa11.73□□□□□ -0.53
TNFRSF1B-202ENST00000489921 ORMDL2Q53FV1 153 aa11.73□□□□□ -0.53
TNFRSF1B-202ENST00000489921 PRR26Q8N8Z3 221 aa11.73□□□□□ -0.53
TNFRSF1B-202ENST00000489921 DIRC1Q969H9 104 aa11.73□□□□□ -0.53
TNFRSF1B-202ENST00000489921 VCX2Q9H322 139 aa11.73□□□□□ -0.53
TNFRSF1B-202ENST00000489921 NPSP0C0P6 89 aa11.72□□□□□ -0.53
TNFRSF1B-202ENST00000489921 C2orf88Q9BSF0 95 aa11.72□□□□□ -0.53
TNFRSF1B-202ENST00000489921 K7EMI3 77 aa11.71□□□□□ -0.53
TNFRSF1B-202ENST00000489921 M0QXV9 152 aa11.71□□□□□ -0.53
TNFRSF1B-202ENST00000489921 KRTAP1-4P0C5Y4 121 aa11.71□□□□□ -0.53
TNFRSF1B-202ENST00000489921 Q6ZN92 141 aa11.7□□□□□ -0.54
TNFRSF1B-202ENST00000489921 PACRGQ96M98 296 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF1B-202ENST00000489921 NXT2Q9NPJ8 142 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1B-202ENST00000489921 Q8IZM0 81 aa11.68□□□□□ -0.54
TNFRSF1B-202ENST00000489921 CDKN2A-AS1Q9UH64 79 aa11.68□□□□□ -0.54
TNFRSF1B-202ENST00000489921 ADCYAP1P18509 176 aa11.67□□□□□ -0.54
TNFRSF1B-202ENST00000489921 RAB14P61106 215 aa11.67□□□□□ -0.54
TNFRSF1B-202ENST00000489921 KIAA1644Q3SXP7 199 aa11.67□□□□□ -0.54
TNFRSF1B-202ENST00000489921 TOMM6Q96B49 74 aa11.67□□□□□ -0.54
TNFRSF1B-202ENST00000489921 CTDSP1Q9GZU7 261 aa11.67□□□□□ -0.54
TNFRSF1B-202ENST00000489921 TOMM7Q9P0U1 55 aa11.67□□□□□ -0.54
TNFRSF1B-202ENST00000489921 UBE2BP63146 152 aa11.66□□□□□ -0.54
TNFRSF1B-202ENST00000489921 C6orf226Q5I0X4 101 aa11.66□□□□□ -0.54
TNFRSF1B-202ENST00000489921 LINC00469Q8N7U9 141 aa11.66□□□□□ -0.54
TNFRSF1B-202ENST00000489921 TIMM17AQ99595 171 aa11.66□□□□□ -0.54
TNFRSF1B-202ENST00000489921 PRSS2P07478 247 aa11.65□□□□□ -0.54
TNFRSF1B-202ENST00000489921 CKS1BP61024 79 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms