RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.11□□□□□ -0.79
LMX1A-204ENST00000489443 PANO1I0J062 215 aa10.1□□□□□ -0.79
LMX1A-204ENST00000489443 G0S2P27469 103 aa10.1□□□□□ -0.79
LMX1A-204ENST00000489443 TEX43Q6ZNM6 134 aa10.1□□□□□ -0.79
LMX1A-204ENST00000489443 SLC7A5P1Q8MH63 180 aa10.1□□□□□ -0.79
LMX1A-204ENST00000489443 DPH3Q96FX2 82 aa10.1□□□□□ -0.79
LMX1A-204ENST00000489443 TRAPPC1Q9Y5R8 145 aa10.1□□□□□ -0.79
LMX1A-204ENST00000489443 COX6A2Q02221 97 aa10.09□□□□□ -0.79
LMX1A-204ENST00000489443 ZC2HC1BQ5TFG8 222 aa10.09□□□□□ -0.79
LMX1A-204ENST00000489443 Q6ZN92 141 aa10.09□□□□□ -0.79
LMX1A-204ENST00000489443 LINC00528Q8N1L1 170 aa10.09□□□□□ -0.79
LMX1A-204ENST00000489443 VCX2Q9H322 139 aa10.09□□□□□ -0.79
LMX1A-204ENST00000489443 IGHV3OR16-9A0A0B4J2B5 98 aa10.08□□□□□ -0.8
LMX1A-204ENST00000489443 IGIPA6NJ69 53 aa10.08□□□□□ -0.8
LMX1A-204ENST00000489443 APOMO95445 188 aa10.08□□□□□ -0.8
LMX1A-204ENST00000489443 IGLV4-69A0A075B6H9 119 aa10.07□□□□□ -0.8
LMX1A-204ENST00000489443 CHTF8P0CG12 524 aa10.07□□□□□ -0.8
LMX1A-204ENST00000489443 SYCNQ0VAF6 134 aa10.07□□□□□ -0.8
LMX1A-204ENST00000489443 FA2HQ7L5A8 372 aa10.07□□□□□ -0.8
LMX1A-204ENST00000489443 TOMM6Q96B49 74 aa10.07□□□□□ -0.8
LMX1A-204ENST00000489443 CARD19Q96LW7 228 aa10.07□□□□□ -0.8
LMX1A-204ENST00000489443 C2orf88Q9BSF0 95 aa10.07□□□□□ -0.8
LMX1A-204ENST00000489443 SMCO4Q9NRQ5 59 aa10.07□□□□□ -0.8
LMX1A-204ENST00000489443 LINC00242Q5T6M2 205 aa10.06□□□□□ -0.8
LMX1A-204ENST00000489443 LINC00173Q6ZV60 143 aa10.06□□□□□ -0.8
LMX1A-204ENST00000489443 SCGB3A1Q96QR1 104 aa10.06□□□□□ -0.8
LMX1A-204ENST00000489443 AMELXQ99217 191 aa10.06□□□□□ -0.8
LMX1A-204ENST00000489443 IGKV2-24A0A0C4DH68 120 aa10.05□□□□□ -0.8
LMX1A-204ENST00000489443 LINC01546A6NGU7 62 aa10.05□□□□□ -0.8
LMX1A-204ENST00000489443 NPSP0C0P6 89 aa10.05□□□□□ -0.8
LMX1A-204ENST00000489443 INAFM2P0DMQ5 153 aa10.05□□□□□ -0.8
LMX1A-204ENST00000489443 UBE2D1P51668 147 aa10.05□□□□□ -0.8
LMX1A-204ENST00000489443 PAPPA-AS1Q5QFB9 102 aa10.05□□□□□ -0.8
LMX1A-204ENST00000489443 ORAOV1Q8WV07 137 aa10.05□□□□□ -0.8
LMX1A-204ENST00000489443 PLA2G1BP04054 148 aaKnown RBP10.04□□□□□ -0.8
LMX1A-204ENST00000489443 SPAG11BQ08648 103 aa10.04□□□□□ -0.8
LMX1A-204ENST00000489443 CIRBPQ14011 172 aaKnown RBP10.04□□□□□ -0.8
LMX1A-204ENST00000489443 ERASQ7Z444 233 aa10.04□□□□□ -0.8
LMX1A-204ENST00000489443 OR10D4PQ8NGN7 298 aa10.04□□□□□ -0.8
LMX1A-204ENST00000489443 CAMK2N2Q96S95 79 aa10.04□□□□□ -0.8
LMX1A-204ENST00000489443 TIMM17AQ99595 171 aa10.04□□□□□ -0.8
LMX1A-204ENST00000489443 Q6ZRU5 148 aa10.03□□□□□ -0.8
LMX1A-204ENST00000489443 CBLN2Q8IUK8 224 aa10.03□□□□□ -0.8
LMX1A-204ENST00000489443 C18orf32Q8TCD1 76 aa10.03□□□□□ -0.8
LMX1A-204ENST00000489443 SPACA4Q8TDM5 124 aa10.03□□□□□ -0.8
LMX1A-204ENST00000489443 C2orf48Q96LS8 159 aa10.03□□□□□ -0.8
LMX1A-204ENST00000489443 YPEL4Q96NS1 127 aa10.03□□□□□ -0.8
LMX1A-204ENST00000489443 FLG2Q5D862 2391 aaPredicted RBP10.03□□□□□ -0.8
LMX1A-204ENST00000489443 A0A087WYN8 130 aa10.02□□□□□ -0.81
LMX1A-204ENST00000489443 A0A087WZ39 114 aa10.02□□□□□ -0.81
LMX1A-204ENST00000489443 MAJINQ3KP22 176 aa10.02□□□□□ -0.81
LMX1A-204ENST00000489443 A0A096LNI7 61 aa10.01□□□□□ -0.81
LMX1A-204ENST00000489443 LINC01549A6NIU2 74 aa10.01□□□□□ -0.81
LMX1A-204ENST00000489443 PKIGQ9Y2B9 76 aa10.01□□□□□ -0.81
LMX1A-204ENST00000489443 LINC00614P0C842 121 aa10□□□□□ -0.81
LMX1A-204ENST00000489443 A0A0J9YXV3 536 aa9.99□□□□□ -0.81
LMX1A-204ENST00000489443 URB1-AS1Q96HZ7 61 aa9.99□□□□□ -0.81
LMX1A-204ENST00000489443 LOC107984640A0A0U1RRK4 108 aa9.98□□□□□ -0.81
LMX1A-204ENST00000489443 NDUFA1O15239 70 aa9.98□□□□□ -0.81
LMX1A-204ENST00000489443 SEC11AP67812 179 aa9.98□□□□□ -0.81
LMX1A-204ENST00000489443 GAGE2BQ13066 116 aa9.98□□□□□ -0.81
LMX1A-204ENST00000489443 FAM19A3Q7Z5A8 133 aa9.98□□□□□ -0.81
LMX1A-204ENST00000489443 STPG4Q8N801 248 aa9.98□□□□□ -0.81
LMX1A-204ENST00000489443 GEMIN7Q9H840 131 aaKnown RBP9.98□□□□□ -0.81
LMX1A-204ENST00000489443 PLAC8Q9NZF1 115 aa9.98□□□□□ -0.81
LMX1A-204ENST00000489443 LINC00474Q9P2X8 69 aa9.98□□□□□ -0.81
LMX1A-204ENST00000489443 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.97□□□□□ -0.81
LMX1A-204ENST00000489443 RAB5BP61020 215 aa9.97□□□□□ -0.81
LMX1A-204ENST00000489443 HERVK_113P63121 156 aa9.97□□□□□ -0.81
LMX1A-204ENST00000489443 PMCHL1Q16048 86 aa9.97□□□□□ -0.81
LMX1A-204ENST00000489443 C10orf25Q5T742 122 aa9.97□□□□□ -0.81
LMX1A-204ENST00000489443 UNQ6190/PRO20217Q6UXQ8 127 aa9.97□□□□□ -0.81
LMX1A-204ENST00000489443 CST9LQ9H4G1 147 aa9.97□□□□□ -0.81
LMX1A-204ENST00000489443 A0A096LNJ9 63 aa9.96□□□□□ -0.82
LMX1A-204ENST00000489443 F8WDY8 70 aa9.96□□□□□ -0.82
LMX1A-204ENST00000489443 RPL37AP61513 92 aaKnown RBP9.96□□□□□ -0.82
LMX1A-204ENST00000489443 KIAA0087Q14695 138 aa9.96□□□□□ -0.82
LMX1A-204ENST00000489443 RNF151Q2KHN1 245 aa9.96□□□□□ -0.82
LMX1A-204ENST00000489443 LINC01561Q8N1V8 128 aa9.96□□□□□ -0.82
LMX1A-204ENST00000489443 CDKN2A-AS1Q9UH64 79 aa9.96□□□□□ -0.82
LMX1A-204ENST00000489443 HBDP02042 147 aa9.95□□□□□ -0.82
LMX1A-204ENST00000489443 PTTG1IPP53801 180 aa9.95□□□□□ -0.82
LMX1A-204ENST00000489443 RPL18AQ02543 176 aaKnown RBP9.95□□□□□ -0.82
LMX1A-204ENST00000489443 PMVKQ15126 192 aa9.95□□□□□ -0.82
LMX1A-204ENST00000489443 MRPL35Q9NZE8 188 aaKnown RBP9.95□□□□□ -0.82
LMX1A-204ENST00000489443 TOMM7Q9P0U1 55 aa9.95□□□□□ -0.82
LMX1A-204ENST00000489443 MYCBP2O75592 4640 aa9.94□□□□□ -0.82
LMX1A-204ENST00000489443 PRSS2P07478 247 aa9.94□□□□□ -0.82
LMX1A-204ENST00000489443 NDUFA6P56556 154 aa9.94□□□□□ -0.82
LMX1A-204ENST00000489443 KRTAP10-4P60372 401 aaPredicted RBP9.94□□□□□ -0.82
LMX1A-204ENST00000489443 C2orf82Q6UX34 121 aa9.94□□□□□ -0.82
LMX1A-204ENST00000489443 LINC00469Q8N7U9 141 aa9.94□□□□□ -0.82
LMX1A-204ENST00000489443 PACRGQ96M98 296 aaPredicted RBP9.94□□□□□ -0.82
LMX1A-204ENST00000489443 TINCRA0A1B0GVN0 87 aa9.93□□□□□ -0.82
LMX1A-204ENST00000489443 C6orf48Q9UBA6 75 aa9.93□□□□□ -0.82
LMX1A-204ENST00000489443 DMBT1Q9UGM3 2413 aaPredicted RBP9.92□□□□□ -0.82
LMX1A-204ENST00000489443 TRGC2P03986 189 aa9.92□□□□□ -0.82
LMX1A-204ENST00000489443 C6orf226Q5I0X4 101 aa9.92□□□□□ -0.82
LMX1A-204ENST00000489443 C7orf33Q8WU49 177 aa9.92□□□□□ -0.82
LMX1A-204ENST00000489443 CKS1BP61024 79 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms