RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, human

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG9A-222	ENST00000488833	NPY	P01303	97 aa		11.32	□□□□□ -0.6
ATG9A-222	ENST00000488833	ODF1	Q14990	250 aa		11.32	□□□□□ -0.6
ATG9A-222	ENST00000488833	OR10D4P	Q8NGN7	298 aa		11.32	□□□□□ -0.6
ATG9A-222	ENST00000488833		A0A1B0GXF2	115 aa		11.31	□□□□□ -0.6
ATG9A-222	ENST00000488833	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
ATG9A-222	ENST00000488833	C9orf116	Q5BN46	136 aa	Predicted RBP	11.31	□□□□□ -0.6
ATG9A-222	ENST00000488833	ORAOV1	Q8WV07	137 aa		11.31	□□□□□ -0.6
ATG9A-222	ENST00000488833	OPRPN	Q99935	248 aa	Predicted RBP	11.31	□□□□□ -0.6
ATG9A-222	ENST00000488833	SMDT1	Q9H4I9	107 aa		11.31	□□□□□ -0.6
ATG9A-222	ENST00000488833	LRP2	P98164	4655 aa		11.31	□□□□□ -0.6
ATG9A-222	ENST00000488833	IFITM10	A6NMD0	228 aa		11.3	□□□□□ -0.6
ATG9A-222	ENST00000488833	RNF151	Q2KHN1	245 aa		11.3	□□□□□ -0.6
ATG9A-222	ENST00000488833	FAM104A	Q969W3	186 aa		11.3	□□□□□ -0.6
ATG9A-222	ENST00000488833	MRPS36	P82909	103 aa	Known RBP	11.29	□□□□□ -0.6
ATG9A-222	ENST00000488833	PPBP	P02775	128 aa		11.28	□□□□□ -0.6
ATG9A-222	ENST00000488833	MT-ND6	P03923	174 aa		11.28	□□□□□ -0.6
ATG9A-222	ENST00000488833	KRTAP10-8	P60410	259 aa		11.28	□□□□□ -0.6
ATG9A-222	ENST00000488833	IGHV3OR16-9	A0A0B4J2B5	98 aa		11.27	□□□□□ -0.61
ATG9A-222	ENST00000488833	NDUFA1	O15239	70 aa		11.27	□□□□□ -0.61
ATG9A-222	ENST00000488833	PHF5A	Q7RTV0	110 aa	Known RBP	11.27	□□□□□ -0.61
ATG9A-222	ENST00000488833	ORMDL3	Q8N138	153 aa		11.27	□□□□□ -0.61
ATG9A-222	ENST00000488833	MRPL35	Q9NZE8	188 aa	Known RBP	11.27	□□□□□ -0.61
ATG9A-222	ENST00000488833	PSORS1C2	Q9UIG4	136 aa		11.27	□□□□□ -0.61
ATG9A-222	ENST00000488833	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.25	□□□□□ -0.61
ATG9A-222	ENST00000488833		F8WDY8	70 aa		11.25	□□□□□ -0.61
ATG9A-222	ENST00000488833	RAB5A	P20339	215 aa		11.25	□□□□□ -0.61
ATG9A-222	ENST00000488833	TMEM136	Q6ZRR5	245 aa		11.25	□□□□□ -0.61
ATG9A-222	ENST00000488833	ATP5L2	Q7Z4Y8	100 aa		11.25	□□□□□ -0.61
ATG9A-222	ENST00000488833	PRELID3A	Q96N28	172 aa		11.25	□□□□□ -0.61
ATG9A-222	ENST00000488833	IMMP2L	Q96T52	175 aa		11.25	□□□□□ -0.61
ATG9A-222	ENST00000488833	IFI27	P40305	119 aa	Predicted RBP	11.24	□□□□□ -0.61
ATG9A-222	ENST00000488833	C1orf137	Q5JT78	98 aa		11.24	□□□□□ -0.61
ATG9A-222	ENST00000488833	C10orf25	Q5T742	122 aa		11.24	□□□□□ -0.61
ATG9A-222	ENST00000488833	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.23	□□□□□ -0.61
ATG9A-222	ENST00000488833	C6orf48	Q9UBA6	75 aa		11.22	□□□□□ -0.61
ATG9A-222	ENST00000488833	IGLV4-3	A0A075B6K6	122 aa		11.21	□□□□□ -0.61
ATG9A-222	ENST00000488833	PYGO1	Q9Y3Y4	419 aa		11.21	□□□□□ -0.61
ATG9A-222	ENST00000488833	RNF213	Q63HN8	5207 aa		11.2	□□□□□ -0.62
ATG9A-222	ENST00000488833		A0A087WZ39	114 aa		11.2	□□□□□ -0.62
ATG9A-222	ENST00000488833	FAM168B	A1KXE4	195 aa		11.2	□□□□□ -0.62
ATG9A-222	ENST00000488833	TLX1NB	P0CAT3	122 aa		11.2	□□□□□ -0.62
ATG9A-222	ENST00000488833	GAGE2E	Q4V326	116 aa		11.2	□□□□□ -0.62
ATG9A-222	ENST00000488833	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.2	□□□□□ -0.62
ATG9A-222	ENST00000488833	TMEM141	Q96I45	108 aa		11.2	□□□□□ -0.62
ATG9A-222	ENST00000488833	GAGE2D	Q9UEU5	116 aa		11.2	□□□□□ -0.62
ATG9A-222	ENST00000488833	LOC389332	A0A1B0GUA5	103 aa		11.19	□□□□□ -0.62
ATG9A-222	ENST00000488833	LINC00242	Q5T6M2	205 aa		11.19	□□□□□ -0.62
ATG9A-222	ENST00000488833	MAP1LC3A	Q9H492	121 aa		11.19	□□□□□ -0.62
ATG9A-222	ENST00000488833	LAMTOR2	Q9Y2Q5	125 aa		11.19	□□□□□ -0.62
ATG9A-222	ENST00000488833	IGLV7-43	P04211	117 aa		11.17	□□□□□ -0.62
ATG9A-222	ENST00000488833	KIAA0087	Q14695	138 aa		11.17	□□□□□ -0.62
ATG9A-222	ENST00000488833	TEX43	Q6ZNM6	134 aa		11.17	□□□□□ -0.62
ATG9A-222	ENST00000488833	PRSS47	A8MTI9	375 aa		11.16	□□□□□ -0.62
ATG9A-222	ENST00000488833	C2orf88	Q9BSF0	95 aa		11.16	□□□□□ -0.62
ATG9A-222	ENST00000488833	CYSLTR1	Q9Y271	337 aa		11.16	□□□□□ -0.62
ATG9A-222	ENST00000488833	TRBV30	A0A0K0K1B3	111 aa		11.15	□□□□□ -0.62
ATG9A-222	ENST00000488833	UBE2D1	P51668	147 aa		11.15	□□□□□ -0.62
ATG9A-222	ENST00000488833	PNRC1	Q12796	327 aa	Predicted RBP	11.15	□□□□□ -0.62
ATG9A-222	ENST00000488833	ZC2HC1B	Q5TFG8	222 aa		11.15	□□□□□ -0.62
ATG9A-222	ENST00000488833	C2orf82	Q6UX34	121 aa		11.15	□□□□□ -0.62
ATG9A-222	ENST00000488833	C2orf66	Q6UXQ4	117 aa		11.15	□□□□□ -0.62
ATG9A-222	ENST00000488833		Q6ZN92	141 aa		11.15	□□□□□ -0.62
ATG9A-222	ENST00000488833	KRTAP11-1	Q8IUC1	163 aa		11.15	□□□□□ -0.62
ATG9A-222	ENST00000488833		Q8N8P6	123 aa		11.15	□□□□□ -0.62
ATG9A-222	ENST00000488833	DIRC1	Q969H9	104 aa		11.15	□□□□□ -0.62
ATG9A-222	ENST00000488833		M0QXV9	152 aa		11.14	□□□□□ -0.63
ATG9A-222	ENST00000488833	MT-ND4L	P03901	98 aa		11.14	□□□□□ -0.63
ATG9A-222	ENST00000488833	ANAPC16	Q96DE5	110 aa		11.14	□□□□□ -0.63
ATG9A-222	ENST00000488833	PACRG	Q96M98	296 aa	Predicted RBP	11.14	□□□□□ -0.63
ATG9A-222	ENST00000488833	UBE2B	P63146	152 aa		11.13	□□□□□ -0.63
ATG9A-222	ENST00000488833	LINC01561	Q8N1V8	128 aa		11.13	□□□□□ -0.63
ATG9A-222	ENST00000488833	ORMDL2	Q53FV1	153 aa		11.12	□□□□□ -0.63
ATG9A-222	ENST00000488833	LINC00173	Q6ZV60	143 aa		11.12	□□□□□ -0.63
ATG9A-222	ENST00000488833	KRTAP7-1	Q8IUC3	87 aa		11.12	□□□□□ -0.63
ATG9A-222	ENST00000488833	NDUFC2-KCTD14	E9PQ53	114 aa		11.11	□□□□□ -0.63
ATG9A-222	ENST00000488833		H0Y9J4	135 aa		11.11	□□□□□ -0.63
ATG9A-222	ENST00000488833	PRR26	Q8N8Z3	221 aa		11.11	□□□□□ -0.63
ATG9A-222	ENST00000488833	AMELX	Q99217	191 aa		11.11	□□□□□ -0.63
ATG9A-222	ENST00000488833	VCX2	Q9H322	139 aa		11.11	□□□□□ -0.63
ATG9A-222	ENST00000488833	PRSS2	P07478	247 aa		11.1	□□□□□ -0.63
ATG9A-222	ENST00000488833	TOMM7	Q9P0U1	55 aa		11.1	□□□□□ -0.63
ATG9A-222	ENST00000488833	RAB14	P61106	215 aa		11.09	□□□□□ -0.63
ATG9A-222	ENST00000488833	C9orf129	Q5T035	196 aa	Known RBP	11.09	□□□□□ -0.63
ATG9A-222	ENST00000488833		K7EMI3	77 aa		11.08	□□□□□ -0.64
ATG9A-222	ENST00000488833	NPS	P0C0P6	89 aa		11.08	□□□□□ -0.64
ATG9A-222	ENST00000488833	CKS1B	P61024	79 aa		11.08	□□□□□ -0.64
ATG9A-222	ENST00000488833	NXT2	Q9NPJ8	142 aa	Known RBP	11.08	□□□□□ -0.64
ATG9A-222	ENST00000488833	IGIP	A6NJ69	53 aa		11.07	□□□□□ -0.64
ATG9A-222	ENST00000488833	CTDSP1	Q9GZU7	261 aa		11.07	□□□□□ -0.64
ATG9A-222	ENST00000488833	C6orf226	Q5I0X4	101 aa		11.06	□□□□□ -0.64
ATG9A-222	ENST00000488833	FAM19A3	Q7Z5A8	133 aa		11.06	□□□□□ -0.64
ATG9A-222	ENST00000488833		Q8IZM0	81 aa		11.06	□□□□□ -0.64
ATG9A-222	ENST00000488833	PAPPA-AS1	Q5QFB9	102 aa		11.05	□□□□□ -0.64
ATG9A-222	ENST00000488833	LINC00469	Q8N7U9	141 aa		11.05	□□□□□ -0.64
ATG9A-222	ENST00000488833	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.05	□□□□□ -0.64
ATG9A-222	ENST00000488833	HERVK_113	P63121	156 aa		11.04	□□□□□ -0.64
ATG9A-222	ENST00000488833	SEC11A	P67812	179 aa		11.04	□□□□□ -0.64
ATG9A-222	ENST00000488833	IGLV1-50	A0A075B6I6	118 aa		11.03	□□□□□ -0.64
ATG9A-222	ENST00000488833	TIMM17A	Q99595	171 aa		11.03	□□□□□ -0.64
ATG9A-222	ENST00000488833	GEMIN7	Q9H840	131 aa	Known RBP	11.03	□□□□□ -0.64

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